Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is ureA

Identifier: 110835582

GI number: 110835582

Start: 3078016

End: 3078318

Strand: Reverse

Name: ureA

Synonym: ABO_2721

Alternate gene names: 110835582

Gene position: 3078318-3078016 (Counterclockwise)

Preceding gene: 110835583

Following gene: 110835581

Centisome position: 98.66

GC content: 54.79

Gene sequence:

>303_bases
ATGGAACTGACACCCAGAGAAAAAGACAAGCTGTTGATTTTTACCGCCGCGCTGCTGGCCGAACGGCGCAAGGCCCGTGG
CGTTAAGCTTAACTATCCGGAATCGATCGCTTATATCACCGCCACCATTATGGAGGGTGCTCGCGACGGCAAAACGGTCG
CCGAATTGATGGGCGAAGGGCGAACCTTGCTCAAGCGTCAGGATGTGATGGAAGGCGTGCCAGAAATGATCCACGAAGTG
CAGGTGGAAGCGACCTTTCCCGATGGCACCAAACTGGTAACGGTTCACGACCCCATCGTTTAA

Upstream 100 bases:

>100_bases
TCTGGCAATTATTGCGTCAGGCCACCCTGAATAAACCGGCGGTGATACCGCGAATCTGGAACACCTGATAACGGTGTAAG
GAAAGGCAAAAAGGTAAAGC

Downstream 100 bases:

>100_bases
GACGATCCGCTATAGGAGAAGCCAAATGATTCCAGGCGAATACGCTATTCAGAACGGCGACATCGAGATCAATCCTGGGC
GGGAAACGCTCAGCGTGGAA

Product: urease subunit gamma

Products: NA

Alternate protein names: Urea amidohydrolase subunit gamma

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MELTPREKDKLLIFTAALLAERRKARGVKLNYPESIAYITATIMEGARDGKTVAELMGEGRTLLKRQDVMEGVPEMIHEV
QVEATFPDGTKLVTVHDPIV

Sequences:

>Translated_100_residues
MELTPREKDKLLIFTAALLAERRKARGVKLNYPESIAYITATIMEGARDGKTVAELMGEGRTLLKRQDVMEGVPEMIHEV
QVEATFPDGTKLVTVHDPIV
>Mature_100_residues
MELTPREKDKLLIFTAALLAERRKARGVKLNYPESIAYITATIMEGARDGKTVAELMGEGRTLLKRQDVMEGVPEMIHEV
QVEATFPDGTKLVTVHDPIV

Specific function: Unknown

COG id: COG0831

COG function: function code E; Urea amidohydrolase (urease) gamma subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the urease gamma subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): URE3_ALCBS (Q0VKX9)

Other databases:

- EMBL:   AM286690
- RefSeq:   YP_694441.1
- ProteinModelPortal:   Q0VKX9
- SMR:   Q0VKX9
- STRING:   Q0VKX9
- GeneID:   4211731
- GenomeReviews:   AM286690_GR
- KEGG:   abo:ABO_2721
- NMPDR:   fig|393595.12.peg.2730
- eggNOG:   COG0831
- HOGENOM:   HBG286300
- OMA:   YPEAVAY
- BioCyc:   ABOR393595:ABO_2721-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00739
- InterPro:   IPR002026
- InterPro:   IPR012010
- Gene3D:   G3DSA:3.30.280.10
- PIRSF:   PIRSF001223
- ProDom:   PD002319
- TIGRFAMs:   TIGR00193

Pfam domain/function: PF00547 Urease_gamma; SSF54111 Urease_gamma_reg

EC number: =3.5.1.5

Molecular weight: Translated: 11150; Mature: 11150

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTPREKDKLLIFTAALLAERRKARGVKLNYPESIAYITATIMEGARDGKTVAELMGEG
CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
RTLLKRQDVMEGVPEMIHEVQVEATFPDGTKLVTVHDPIV
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC
>Mature Secondary Structure
MELTPREKDKLLIFTAALLAERRKARGVKLNYPESIAYITATIMEGARDGKTVAELMGEG
CCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCC
RTLLKRQDVMEGVPEMIHEVQVEATFPDGTKLVTVHDPIV
HHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA