The gene/protein map for NC_008260 is currently unavailable.
Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is yedI [H]

Identifier: 110835565

GI number: 110835565

Start: 3057927

End: 3058859

Strand: Reverse

Name: yedI [H]

Synonym: ABO_2704

Alternate gene names: 110835565

Gene position: 3058859-3057927 (Counterclockwise)

Preceding gene: 110835566

Following gene: 110835563

Centisome position: 98.04

GC content: 45.02

Gene sequence:

>933_bases
GTGGCAGGAACAAGTTTACTGATGTTGCTGGATGACATCGCCGCAGTGCTTGATGACGTGTCGGTGATGACCAAGGTGGC
AGCCAAGAAAACCGCAGGGGTGCTGGGCGATGACTTGGCGTTAAATGCGGAGCAGGCATCGGGCGTGCGTGCAGAACGCG
AGCTTCCTGTGGTGTGGGCCGTGGCTAAAGGTTCCATGCGCAATAAATGTATTCTGGTTCCTTCGGCGTTGTTGATCAGT
GCTTTTTTGCCTTGGTTGATCACTCCATTGTTGATGTTAGGTGGCGCTTACCTGTGCTATGAAGGGGTGGAAAAACTAGC
GCATAAATTTTTTCATGGAGCAGAAGAATCTCAAGAGCATAAAGAAAGAATTCAAGCCATGATTGACCCGAAAGTGGACT
TGGTCTCTTTTGAAAAAAATAAAATTAAAGGGGCTGTTCGAACGGACTTTATCTTGTCTGCAGAAATTATTGTTATTGCT
TTGGGAACAGTACAGGCTGCGCCTTTTTTACAGCAAATTATGGTGATAAGTCTTATCGCGGGGGCCATGACCATCGGCGT
TTATGGATTGGTGGCTGGCATTGTTAAGTTAGACGATGCGGGTTTGTATTTGATTGAATCGGGTAAAGAAAAAAATGAAA
AAATTCGGTCTTTTTTAGGAGGGATGCTACTTGGTTTTTCTCCTAAACTAATGAAGTTTTTATCCGTGGCAGGAACGGCT
GCTATGTTCTTGGTAGGCGGGGGTATTTTGCTTCATGGCTTGCCAATGAGTCACGATACTTTGCATTATATAGACGAACT
AATGGTGACCTTTCCCATGGCCGCTGTGCTAAGCGTTTTGATGCCCATGCTTGTAAATGTAGTGCTGGGCATTGTCGCTG
GCAGCATTGTTTTGTTTGCAGTAAAGGGCGTTAATTTTTTGAGACAAAAATAA

Upstream 100 bases:

>100_bases
GTCGGCATTGTCGCGATCACCATTAACCGGCCTAGGTTGAATTTTGTAAAGTGACTAAAAATTAGACTTCAAAAAAATTT
ATTTTTTAAGGATAAATAAC

Downstream 100 bases:

>100_bases
GAAAAAATTGGAAAAGCGAGAAAAAATTCTCGCTTTTCATGTGCGCTATTGAAAATAGGAAAGATATTTTCCGTAACCCT
TTTGGGTCATTTCCTCCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MAGTSLLMLLDDIAAVLDDVSVMTKVAAKKTAGVLGDDLALNAEQASGVRAERELPVVWAVAKGSMRNKCILVPSALLIS
AFLPWLITPLLMLGGAYLCYEGVEKLAHKFFHGAEESQEHKERIQAMIDPKVDLVSFEKNKIKGAVRTDFILSAEIIVIA
LGTVQAAPFLQQIMVISLIAGAMTIGVYGLVAGIVKLDDAGLYLIESGKEKNEKIRSFLGGMLLGFSPKLMKFLSVAGTA
AMFLVGGGILLHGLPMSHDTLHYIDELMVTFPMAAVLSVLMPMLVNVVLGIVAGSIVLFAVKGVNFLRQK

Sequences:

>Translated_310_residues
MAGTSLLMLLDDIAAVLDDVSVMTKVAAKKTAGVLGDDLALNAEQASGVRAERELPVVWAVAKGSMRNKCILVPSALLIS
AFLPWLITPLLMLGGAYLCYEGVEKLAHKFFHGAEESQEHKERIQAMIDPKVDLVSFEKNKIKGAVRTDFILSAEIIVIA
LGTVQAAPFLQQIMVISLIAGAMTIGVYGLVAGIVKLDDAGLYLIESGKEKNEKIRSFLGGMLLGFSPKLMKFLSVAGTA
AMFLVGGGILLHGLPMSHDTLHYIDELMVTFPMAAVLSVLMPMLVNVVLGIVAGSIVLFAVKGVNFLRQK
>Mature_309_residues
AGTSLLMLLDDIAAVLDDVSVMTKVAAKKTAGVLGDDLALNAEQASGVRAERELPVVWAVAKGSMRNKCILVPSALLISA
FLPWLITPLLMLGGAYLCYEGVEKLAHKFFHGAEESQEHKERIQAMIDPKVDLVSFEKNKIKGAVRTDFILSAEIIVIAL
GTVQAAPFLQQIMVISLIAGAMTIGVYGLVAGIVKLDDAGLYLIESGKEKNEKIRSFLGGMLLGFSPKLMKFLSVAGTAA
MFLVGGGILLHGLPMSHDTLHYIDELMVTFPMAAVLSVLMPMLVNVVLGIVAGSIVLFAVKGVNFLRQK

Specific function: Unknown

COG id: COG2354

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788268, Length=314, Percent_Identity=55.7324840764331, Blast_Score=319, Evalue=1e-88,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008526 [H]

Pfam domain/function: PF05661 DUF808 [H]

EC number: NA

Molecular weight: Translated: 33150; Mature: 33019

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGTSLLMLLDDIAAVLDDVSVMTKVAAKKTAGVLGDDLALNAEQASGVRAERELPVVWA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCCCCEEEE
VAKGSMRNKCILVPSALLISAFLPWLITPLLMLGGAYLCYEGVEKLAHKFFHGAEESQEH
ECCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHH
KERIQAMIDPKVDLVSFEKNKIKGAVRTDFILSAEIIVIALGTVQAAPFLQQIMVISLIA
HHHHHHHHCCCCCEEECHHHHHCCHHHHHHHEEHHHHEEEECHHHHHHHHHHHHHHHHHH
GAMTIGVYGLVAGIVKLDDAGLYLIESGKEKNEKIRSFLGGMLLGFSPKLMKFLSVAGTA
HHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
AMFLVGGGILLHGLPMSHDTLHYIDELMVTFPMAAVLSVLMPMLVNVVLGIVAGSIVLFA
HHHHHCCHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VKGVNFLRQK
HHHHHHHHCC
>Mature Secondary Structure 
AGTSLLMLLDDIAAVLDDVSVMTKVAAKKTAGVLGDDLALNAEQASGVRAERELPVVWA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCHHHCCCCCCCCCCEEEE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HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 2527357; 7567469 [H]