| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yaeQ [H]
Identifier: 110835535
GI number: 110835535
Start: 3021609
End: 3022148
Strand: Direct
Name: yaeQ [H]
Synonym: ABO_2674
Alternate gene names: 110835535
Gene position: 3021609-3022148 (Clockwise)
Preceding gene: 110835534
Following gene: 110835536
Centisome position: 96.84
GC content: 56.85
Gene sequence:
>540_bases ATGGCCCTCACCGCCACCATCTACAAAGCTGAACTCACCGTTTCCGATATGGACCGGGATTATTACGCCACCCATAATCT GACAGTAGCCTTGCACCCCTCGGAAACCGAATCACGAATGATGTTGCGGCTACTGGCCTTTGCTCTCAACGCCCATGAAG ATCTGGCCTTCTCTCGAGGCCTGTCCAACCCGGAAGAACCAGACCTGTGGCAACGCCATCCCAACGACACCCTTGCCCAC TGGATCGAGTTGGGCATGCCCGATGAGAAACGCCTGCGTAAAGCGTGTGGCCTGGCGGAACAGGTTACCCTGTATTGTTA TGGCCCACGGGCGCCACAGGTATGGTGGGACAGCATGAAGAACAAGGTGCGTCGCTTCGATAACCTGACCATCATCCACG TGGATGCAGACAGCGAAGCCACACTGGCCACCTGCGCTCAGCGGGCCATGCAGTTACAGGCGATGATTCAGGATGGCCAG GTCTGGTTCGGCACCACGGAACAGAGCGAAGAAATCACGCTTTCGCAATGGTACCCCTGA
Upstream 100 bases:
>100_bases AAAACGACTGTTGCGCCCGCCGTACACACTCCAACCTGATACAATCAGCCCCTTTTGCGTGCATGCCTGTTGCGTGCTCC CTGTTTGCGAGTCCTCTGCC
Downstream 100 bases:
>100_bases CTCTCATTCTTGTATGACGCCCCGGCATTTGGTGGTCGCGCCTTCCGCTGTGCTACATTCACTCTCTATACGCACATCAA CGCATTGCCGACACGGAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAH WIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQ VWFGTTEQSEEITLSQWYP
Sequences:
>Translated_179_residues MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAH WIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQ VWFGTTEQSEEITLSQWYP >Mature_178_residues ALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRGLSNPEEPDLWQRHPNDTLAHW IELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMKNKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQV WFGTTEQSEEITLSQWYP
Specific function: Unknown
COG id: COG4681
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786388, Length=177, Percent_Identity=45.7627118644068, Blast_Score=169, Evalue=1e-43,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009822 [H]
Pfam domain/function: PF07152 YaeQ [H]
EC number: NA
Molecular weight: Translated: 20574; Mature: 20443
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRG CCEEEEEEEEEEEHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCC LSNPEEPDLWQRHPNDTLAHWIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMK CCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHH NKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQVWFGTTEQSEEITLSQWYP HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCC >Mature Secondary Structure ALTATIYKAELTVSDMDRDYYATHNLTVALHPSETESRMMLRLLAFALNAHEDLAFSRG CEEEEEEEEEEEHHHCCCCEEEECCEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHCC LSNPEEPDLWQRHPNDTLAHWIELGMPDEKRLRKACGLAEQVTLYCYGPRAPQVWWDSMK CCCCCCCCHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCHHEEEEEECCCCCHHHHHHHH NKVRRFDNLTIIHVDADSEATLATCAQRAMQLQAMIQDGQVWFGTTEQSEEITLSQWYP HHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]