| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is engb
Identifier: 110835513
GI number: 110835513
Start: 2997580
End: 2998206
Strand: Direct
Name: engb
Synonym: ABO_2652
Alternate gene names: 110835513
Gene position: 2997580-2998206 (Clockwise)
Preceding gene: 110835507
Following gene: 110835520
Centisome position: 96.07
GC content: 57.58
Gene sequence:
>627_bases ATGCCCATGCACCCCATGGAAAAACGACTCCACCAGGCACTATTCCTGCAAAGCGCCCAGCGCCTAGACCAATGCCCGCC GGATGAAGGACGGGAAGTAGCCTTCGCCGGACGCTCCAATGCCGGAAAGTCCAGCGCCATTAATCGGCTCACCGGCCAAC GAAGCCTGGCCCGCACCTCCAAGACCCCAGGGCGGACTCAGCTATTGAACTTCTTCCAGCTCGACGAAGAGCGCCGACTA GTGGATCTACCCGGTTACGGCTATGCCAAAGTCTCCAAAAGCAAGCGTAACGAGTGGCAGGAGCATCTCGACCATTACCT TTCCGAACGTCAGGCATTAGTCGGGCTTGTGCTGATGATGGACATCCGCCATCCGCTCAAGGACTTCGATTTGATGATGC TAGAATGGTCCGCCCAGGCCAACATGCCCATCCACATCCTTATGACCAAGGCCGACAAACTGAAGTTCGGCGCCGCCAAG TCCACCCTGCTACAAGTGCAAAAGCAGCTAAAGGAACACCCTGCCCCGCTCTCGCTACAGCTGTTTTCGGCCACCAATGG CACCGGGTGTGACGAAGCCTGGGACAAGCTGGGGGAATGGCTAGGGATAGAACGGCTGACGCCATAA
Upstream 100 bases:
>100_bases TAAATTGCCCATTCATTTTCTCTCCCCAGCGGGTATGCATTGCCAGCCGCAGGCCAGACAGCAAGAATAGCCCCCTGACG ACATCCAAAGGCTCCTTGTT
Downstream 100 bases:
>100_bases TGACTTAGGGCGAAAATGAACGCCAAGCCGCCGGCCATAGCTCATCTAGCATTTTCTTCAGGCAAAAAAATCCCCGGCAG CAATCTAGGGGGGAAGGGAA
Product: GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPMHPMEKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNFFQLDEERRL VDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRHPLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAK STLLQVQKQLKEHPAPLSLQLFSATNGTGCDEAWDKLGEWLGIERLTP
Sequences:
>Translated_208_residues MPMHPMEKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNFFQLDEERRL VDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRHPLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAK STLLQVQKQLKEHPAPLSLQLFSATNGTGCDEAWDKLGEWLGIERLTP >Mature_207_residues PMHPMEKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTSKTPGRTQLLNFFQLDEERRLV DLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMMDIRHPLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAKS TLLQVQKQLKEHPAPLSLQLFSATNGTGCDEAWDKLGEWLGIERLTP
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=179, Percent_Identity=33.5195530726257, Blast_Score=88, Evalue=5e-18, Organism=Escherichia coli, GI145693205, Length=191, Percent_Identity=51.3089005235602, Blast_Score=201, Evalue=2e-53, Organism=Saccharomyces cerevisiae, GI6320543, Length=130, Percent_Identity=33.8461538461538, Blast_Score=77, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_ALCBS (Q0VL48)
Other databases:
- EMBL: AM286690 - RefSeq: YP_694372.1 - ProteinModelPortal: Q0VL48 - SMR: Q0VL48 - STRING: Q0VL48 - GeneID: 4213347 - GenomeReviews: AM286690_GR - KEGG: abo:ABO_2652 - NMPDR: fig|393595.12.peg.2659 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: THFVTSA - PhylomeDB: Q0VL48 - BioCyc: ABOR393595:ABO_2652-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23650; Mature: 23518
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMHPMEKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTS CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC KTPGRTQLLNFFQLDEERRLVDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMM CCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRHPLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVQKQLKEHPAPLSLQ HHHCCHHHHHEEEEEECCCCCCCEEEEEECCCHHHHCHHHHHHHHHHHHHHHCCCCCEEE LFSATNGTGCDEAWDKLGEWLGIERLTP EEECCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PMHPMEKRLHQALFLQSAQRLDQCPPDEGREVAFAGRSNAGKSSAINRLTGQRSLARTS CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHC KTPGRTQLLNFFQLDEERRLVDLPGYGYAKVSKSKRNEWQEHLDHYLSERQALVGLVLMM CCCCHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIRHPLKDFDLMMLEWSAQANMPIHILMTKADKLKFGAAKSTLLQVQKQLKEHPAPLSLQ HHHCCHHHHHEEEEEECCCCCCCEEEEEECCCHHHHCHHHHHHHHHHHHHHHCCCCCEEE LFSATNGTGCDEAWDKLGEWLGIERLTP EEECCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA