Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835507

Identifier: 110835507

GI number: 110835507

Start: 2992813

End: 2994009

Strand: Direct

Name: 110835507

Synonym: ABO_2646

Alternate gene names: NA

Gene position: 2992813-2994009 (Clockwise)

Preceding gene: 110835503

Following gene: 110835513

Centisome position: 95.92

GC content: 56.39

Gene sequence:

>1197_bases
ATGACTCAGTCTGCTGTGGATGGATTATTGGGCCACGAGCGAGAGGATCTACTCGACACATTGTACGAGGCGCCGCAAGC
CCCTGACGCTTGGCCACGCTTTCTGGCACAAGCCGTAAGCGCCACCCGATCGCGCTCCGCCCGCATGCTCGTACTCGACC
GTCGGGCACAAACCGTGCTCTCCAGCATCAAGCACAATATTGATGACACAGACCATCAGGCTTATGTGGATCACTATGTG
AATGCCTGCCCCTGGCGCCCGGAATTAAAAGATAAGCCCCCAGGCCAGCTGTATTCCACCTTTCTGGATTTCTCCTGTCG
GCAAAACGCGTTCTACCGCACCGAATTCTATAACGACTGGGCCCGCGCCCAAGACATCCACCATGGCGTATGCGGCACCG
TTTGGCAGGATGAAGACCACACCGTCCAGCTGCTAATTCAGCGCACCAAAGATCAAAGCCACTACAGCCGGGAAGAAACT
GACCAAATCAACGACTTGGTGATGCATGTGCGCCGTGCCGTACGGCTGCAAACCCAATTCAGCGCCCTGAAGCACCAAAA
CCAAGCTCTCCAGCAAACACTGGATATCCAGGCCCAGCCCTTCGCCCTGCTTGATGCCCAGGGCACGCTAGTACACGTTA
GTCAGGAAGCCGAAGCGCTAATTGAAGCGCACCCGCACATGACGTTAGCGAATCGCAAACTAACCTTCCATGATGTACGC
CAGCAATCGGAGTTATTGCATCAATTGGGCCAGGTAACGCACCCCAATCCCTCCTTACGTGGTAGCGGCGACGTGATTGC
CGTTCCCCTGAACAGCCACCAGGTTACCCGCTGCCTCATTTCCCCCATGCATCCCGGAACAGCCCCCGGCGACTTCAATG
CCCACCCAACGCCCCTCGCCATCGTCTATTTTCAGGACCCACTGGGTGACATTGAGGTGGACCTAGACAGCCTAATGCAG
CTGTTCGAATTATCCGAAGCGGAAGCCCGAGTGGCCGCAGGCATTGCTAAAGGACTATCGCCCCAGCAAATTGCCGATAA
TCATTTTCTCTCTGTCCACACTGTCCGCACACAGCTGAAAAGCACCTTCCAGAAAACCGGCACCATGCGCCAGACAGAGC
TAGCAAAGCAAGTACTTACTTCTCCTGCAGCCCGCCGGTGGCGTCGCCCGCCGCTGAATCTGAGCTGCTCTGCATAG

Upstream 100 bases:

>100_bases
CATCTGCTTCTCCTATTCCCCAAAGGGCCACATCTGTTATTTACATTCAATTTCCGGTCCAAATCGGATAAATTAAGGCT
TCATTAGGGGAATACAACCA

Downstream 100 bases:

>100_bases
CCTTGCGAGCCACCGCCATAAACAGATCAAACTGATAGGCAAAACGCCAATCCTTCTGCCGCAACTCATCGAGGGAATAC
CAGCCAATATCACTGACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; Transcriptional Regulator LuxR Family Protein; Regulatory Protein LuxR; Response Regulator Receiver Domain Protein; Response Regulator Receiver Domain-Containing Protein; Response Regulator Receiver Protein

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTQSAVDGLLGHEREDLLDTLYEAPQAPDAWPRFLAQAVSATRSRSARMLVLDRRAQTVLSSIKHNIDDTDHQAYVDHYV
NACPWRPELKDKPPGQLYSTFLDFSCRQNAFYRTEFYNDWARAQDIHHGVCGTVWQDEDHTVQLLIQRTKDQSHYSREET
DQINDLVMHVRRAVRLQTQFSALKHQNQALQQTLDIQAQPFALLDAQGTLVHVSQEAEALIEAHPHMTLANRKLTFHDVR
QQSELLHQLGQVTHPNPSLRGSGDVIAVPLNSHQVTRCLISPMHPGTAPGDFNAHPTPLAIVYFQDPLGDIEVDLDSLMQ
LFELSEAEARVAAGIAKGLSPQQIADNHFLSVHTVRTQLKSTFQKTGTMRQTELAKQVLTSPAARRWRRPPLNLSCSA

Sequences:

>Translated_398_residues
MTQSAVDGLLGHEREDLLDTLYEAPQAPDAWPRFLAQAVSATRSRSARMLVLDRRAQTVLSSIKHNIDDTDHQAYVDHYV
NACPWRPELKDKPPGQLYSTFLDFSCRQNAFYRTEFYNDWARAQDIHHGVCGTVWQDEDHTVQLLIQRTKDQSHYSREET
DQINDLVMHVRRAVRLQTQFSALKHQNQALQQTLDIQAQPFALLDAQGTLVHVSQEAEALIEAHPHMTLANRKLTFHDVR
QQSELLHQLGQVTHPNPSLRGSGDVIAVPLNSHQVTRCLISPMHPGTAPGDFNAHPTPLAIVYFQDPLGDIEVDLDSLMQ
LFELSEAEARVAAGIAKGLSPQQIADNHFLSVHTVRTQLKSTFQKTGTMRQTELAKQVLTSPAARRWRRPPLNLSCSA
>Mature_397_residues
TQSAVDGLLGHEREDLLDTLYEAPQAPDAWPRFLAQAVSATRSRSARMLVLDRRAQTVLSSIKHNIDDTDHQAYVDHYVN
ACPWRPELKDKPPGQLYSTFLDFSCRQNAFYRTEFYNDWARAQDIHHGVCGTVWQDEDHTVQLLIQRTKDQSHYSREETD
QINDLVMHVRRAVRLQTQFSALKHQNQALQQTLDIQAQPFALLDAQGTLVHVSQEAEALIEAHPHMTLANRKLTFHDVRQ
QSELLHQLGQVTHPNPSLRGSGDVIAVPLNSHQVTRCLISPMHPGTAPGDFNAHPTPLAIVYFQDPLGDIEVDLDSLMQL
FELSEAEARVAAGIAKGLSPQQIADNHFLSVHTVRTQLKSTFQKTGTMRQTELAKQVLTSPAARRWRRPPLNLSCSA

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44909; Mature: 44778

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: PS00082 EXTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQSAVDGLLGHEREDLLDTLYEAPQAPDAWPRFLAQAVSATRSRSARMLVLDRRAQTVL
CCCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
SSIKHNIDDTDHQAYVDHYVNACPWRPELKDKPPGQLYSTFLDFSCRQNAFYRTEFYNDW
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH
ARAQDIHHGVCGTVWQDEDHTVQLLIQRTKDQSHYSREETDQINDLVMHVRRAVRLQTQF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SALKHQNQALQQTLDIQAQPFALLDAQGTLVHVSQEAEALIEAHPHMTLANRKLTFHDVR
HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHCCCCEEECCCCCHHHHHH
QQSELLHQLGQVTHPNPSLRGSGDVIAVPLNSHQVTRCLISPMHPGTAPGDFNAHPTPLA
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
IVYFQDPLGDIEVDLDSLMQLFELSEAEARVAAGIAKGLSPQQIADNHFLSVHTVRTQLK
EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
STFQKTGTMRQTELAKQVLTSPAARRWRRPPLNLSCSA
HHHHHHCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TQSAVDGLLGHEREDLLDTLYEAPQAPDAWPRFLAQAVSATRSRSARMLVLDRRAQTVL
CCHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHH
SSIKHNIDDTDHQAYVDHYVNACPWRPELKDKPPGQLYSTFLDFSCRQNAFYRTEFYNDW
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEHHHHHHH
ARAQDIHHGVCGTVWQDEDHTVQLLIQRTKDQSHYSREETDQINDLVMHVRRAVRLQTQF
HHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
SALKHQNQALQQTLDIQAQPFALLDAQGTLVHVSQEAEALIEAHPHMTLANRKLTFHDVR
HHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECHHHHHHHHCCCCEEECCCCCHHHHHH
QQSELLHQLGQVTHPNPSLRGSGDVIAVPLNSHQVTRCLISPMHPGTAPGDFNAHPTPLA
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCEE
IVYFQDPLGDIEVDLDSLMQLFELSEAEARVAAGIAKGLSPQQIADNHFLSVHTVRTQLK
EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHH
STFQKTGTMRQTELAKQVLTSPAARRWRRPPLNLSCSA
HHHHHHCCHHHHHHHHHHHHCHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA