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The map label for this gene is cc4 [H]

Identifier: 110835511

GI number: 110835511

Start: 2996278

End: 2996931

Strand: Reverse

Name: cc4 [H]

Synonym: ABO_2650

Alternate gene names: 110835511

Gene position: 2996931-2996278 (Counterclockwise)

Preceding gene: 110835512

Following gene: 110835510

Centisome position: 96.05

GC content: 57.19

Gene sequence:

>654_bases
ATGAAGTTTTTCAAACTGTTCGTGCTGATGGCTGCTGCTGTCGCCGCCACCCAGGCTATGGCGGCCGGTGATGCTGAGGC
AGGCAAAGCAAAAGCCGCCCCCTGCGCCGCGTGCCACGGCCAGGATGGTAACAAGACTCTTACCGGGACTTACCCGAAAC
TGGCTGGCCAGGGGGCAGAATACCTGGTGAAGCAGCTAGAGGATTTCAAGTCTGGTGCCCGTGATAATGCGATCATGAAG
GGGCAGGTTGTAGGCCTGAACCAGCAGGACATGCAAGACATAGCCGCTTATTACGCCAGCTTGACCCCGGAAGCGGGCCA
GGCTAGCGCAGACTGGGTTGAGCAGGGCGAAAAGCTCTACCGCGGTGGGGATATGGCTAACGGTATTCCAGCTTGTTCTG
GTTGCCACGGCCCGGCAGGGCAAGGCGTTGATGCGGCCAAATATCCGCATCTGGCTGGCCAGAATGCCCAATACGTGGAA
GATCAATTGAAAGCCTTCCGTGCGGCAGGTCGTAACGACTTGGGTGATGGCATTATCAAACGCACCAATGACTCGGACAG
CGATACGCTGGGCATGATGCAGACGGTGGCGGCGAAAATGACCGATACCCAAATCAAGGCCGTAGCAAGCTTTATCTCCG
GGCTGTCCAAATAG

Upstream 100 bases:

>100_bases
CCCCCAAAGGCATGTGTAACGATTGTAGTGACGAAGAATACCGTGCTCTGATTGAGTACATGTCCAAAAGCAAATAAGAC
GCTGTACTGAAGGATAGGCC

Downstream 100 bases:

>100_bases
GGTTGTTCGGCTATGCTTTGTAGAAAAGGCAGCCTGCGGGCTGCCTTTTTTATGGTCAACATGAAAAGATATGGCTCTGA
GTGGGTGCGGATTGTACTTA

Product: cytochrome c4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKFFKLFVLMAAAVAATQAMAAGDAEAGKAKAAPCAACHGQDGNKTLTGTYPKLAGQGAEYLVKQLEDFKSGARDNAIMK
GQVVGLNQQDMQDIAAYYASLTPEAGQASADWVEQGEKLYRGGDMANGIPACSGCHGPAGQGVDAAKYPHLAGQNAQYVE
DQLKAFRAAGRNDLGDGIIKRTNDSDSDTLGMMQTVAAKMTDTQIKAVASFISGLSK

Sequences:

>Translated_217_residues
MKFFKLFVLMAAAVAATQAMAAGDAEAGKAKAAPCAACHGQDGNKTLTGTYPKLAGQGAEYLVKQLEDFKSGARDNAIMK
GQVVGLNQQDMQDIAAYYASLTPEAGQASADWVEQGEKLYRGGDMANGIPACSGCHGPAGQGVDAAKYPHLAGQNAQYVE
DQLKAFRAAGRNDLGDGIIKRTNDSDSDTLGMMQTVAAKMTDTQIKAVASFISGLSK
>Mature_217_residues
MKFFKLFVLMAAAVAATQAMAAGDAEAGKAKAAPCAACHGQDGNKTLTGTYPKLAGQGAEYLVKQLEDFKSGARDNAIMK
GQVVGLNQQDMQDIAAYYASLTPEAGQASADWVEQGEKLYRGGDMANGIPACSGCHGPAGQGVDAAKYPHLAGQNAQYVE
DQLKAFRAAGRNDLGDGIIKRTNDSDSDTLGMMQTVAAKMTDTQIKAVASFISGLSK

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 22604; Mature: 22604

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFFKLFVLMAAAVAATQAMAAGDAEAGKAKAAPCAACHGQDGNKTLTGTYPKLAGQGAE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHCCCHH
YLVKQLEDFKSGARDNAIMKGQVVGLNQQDMQDIAAYYASLTPEAGQASADWVEQGEKLY
HHHHHHHHHHCCCCCCCEECCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RGGDMANGIPACSGCHGPAGQGVDAAKYPHLAGQNAQYVEDQLKAFRAAGRNDLGDGIIK
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEE
RTNDSDSDTLGMMQTVAAKMTDTQIKAVASFISGLSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKFFKLFVLMAAAVAATQAMAAGDAEAGKAKAAPCAACHGQDGNKTLTGTYPKLAGQGAE
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCEEECCCCHHHHCCCHH
YLVKQLEDFKSGARDNAIMKGQVVGLNQQDMQDIAAYYASLTPEAGQASADWVEQGEKLY
HHHHHHHHHHCCCCCCCEECCEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RGGDMANGIPACSGCHGPAGQGVDAAKYPHLAGQNAQYVEDQLKAFRAAGRNDLGDGIIK
CCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHEE
RTNDSDSDTLGMMQTVAAKMTDTQIKAVASFISGLSK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]