Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is dsbA [H]

Identifier: 110835510

GI number: 110835510

Start: 2995478

End: 2996113

Strand: Reverse

Name: dsbA [H]

Synonym: ABO_2649

Alternate gene names: 110835510

Gene position: 2996113-2995478 (Counterclockwise)

Preceding gene: 110835511

Following gene: 110835509

Centisome position: 96.02

GC content: 51.73

Gene sequence:

>636_bases
ATGCTTCGCATTGTAACGGCTTTGCTGCTGAGTCTGGGGCTGGCGACCGGAGTTGCGGCCGCCGAAGAACATACCCGTTT
TGCGGTAGACACTCATTATAAAGTTCTGGATGTGCCCGGATCTGTTGACGATCCCAGCAAGGTAGAAGTACGGGAGTTCT
TTTCCTATGGCTGCCCTCACTGCTATTCACTGGAGCCGGCTGTTGATGCTTGGCTGGAAGAGAAGCCAGACTACATCGAC
TATGTGCGCACCCCAGTGTTATTCCTGCGTAACGCCGAACCGCTGGCTCGTGCCTACTACGTAGAAGACGCCCTTGGCTT
GGTTGATGAAATGCATGTGCCGTTGTTTGATGCGATCCACAAGCACCGTGAGCCTTTATTCAACGAGTCGGCGTTGGCCA
ACTTTTTCCGCAAGTATGGTGTTGAGCCTGCGGAGTTCAGCAAGCTCTATGGTTCGTTTGGTGTTTCCACCAAGATTCGT
CAGGCAGATGCGTTGAGCAAAAAATACCAGATTCCCGGAGTGCCCAACTTCGTGGTGAACGGCAAGTATTTGGTAAAGCG
CGAAAACGTGAAGAGCAACGAGGAGCTGTTCAAGGTGATTGAATTCTTGGTGAACAAGGAAAAGACAGGCAGCTGA

Upstream 100 bases:

>100_bases
AAAGATATGGCTCTGAGTGGGTGCGGATTGTACTTACTAGGGAGAAAAATGCCGCCCCGGTTGTCACAATGGGCGCAAAC
CAACAAAAAAGGAGAGCGAT

Downstream 100 bases:

>100_bases
TATTATGTTGCTTGATCGCGCTAGACTGGCCTACCGTGACTGGAAAGCCCGGCCCGCGGGTTTTTCCTTTGCCCGGGAAG
GGGCACGAAAGACCCGCCAG

Product: DsbA family thiol:disulfide interchange protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID
YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR
QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS

Sequences:

>Translated_211_residues
MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID
YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR
QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS
>Mature_211_residues
MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPHCYSLEPAVDAWLEEKPDYID
YVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIHKHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIR
QADALSKKYQIPGVPNFVVNGKYLVKRENVKSNEELFKVIEFLVNKEKTGS

Specific function: Involved in disulfide-bond formation. Acts by transferring its disulfide bond to other proteins [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1790291, Length=155, Percent_Identity=30.3225806451613, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 1348 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001853
- InterPro:   IPR023205
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF01323 DSBA [H]

EC number: 5.3.4.1

Molecular weight: Translated: 23850; Mature: 23850

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPH
CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCC
CYSLEPAVDAWLEEKPDYIDYVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIH
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
KHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIRQADALSKKYQIPGVPNFVVN
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEC
GKYLVKRENVKSNEELFKVIEFLVNKEKTGS
CEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MLRIVTALLLSLGLATGVAAAEEHTRFAVDTHYKVLDVPGSVDDPSKVEVREFFSYGCPH
CHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCEEEEECCCCCCCCCHHHHHHHHHCCCCC
CYSLEPAVDAWLEEKPDYIDYVRTPVLFLRNAEPLARAYYVEDALGLVDEMHVPLFDAIH
CCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
KHREPLFNESALANFFRKYGVEPAEFSKLYGSFGVSTKIRQADALSKKYQIPGVPNFVVN
HHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEEC
GKYLVKRENVKSNEELFKVIEFLVNKEKTGS
CEEEEEECCCCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10051655 [H]