| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835508
Identifier: 110835508
GI number: 110835508
Start: 2993948
End: 2994484
Strand: Reverse
Name: 110835508
Synonym: ABO_2647
Alternate gene names: NA
Gene position: 2994484-2993948 (Counterclockwise)
Preceding gene: 110835509
Following gene: 110835506
Centisome position: 95.97
GC content: 57.73
Gene sequence:
>537_bases ATGAAGGCATCCTCTTTCCTGATTACCCTATCTCTTATGTTGCCGTCGCTGCAGGCGCTGTCGGATTGCCCCCGCGTGCT TGGGCAGCAGGATGACCGACGCGCCAATGCTGGCTGTTTGATTATCCGTGATCAGCAGGTGCTGCTAATTACCCACCGCT GGGGCGACAAGTTAGGTGTGCCTGGGGGAACCCTCGAGCGCGGAGAACTGGCCCAGTGCACGGCATACCGGGAGACCCTT GAAGAGACGGGTTTACAGGTTGTGGTAGGGGAGCGCGTGCAGGTGATGAAGAACGGTTTTCATCTCTATCGCTGTATTCC TGCCGAATCTCTGCCAGAGGGGGAGCCCTTGCTGTTACCGGCTCAGGCTCGGCTAGAGGTCAGTGATATTGGCTGGTATT CCCTCGATGAGTTGCGGCAGAAGGATTGGCGTTTTGCCTATCAGTTTGATCTGTTTATGGCGGTGGCTCGCAAGGCTATG CAGAGCAGCTCAGATTCAGCGGCGGGCGACGCCACCGGCGGGCTGCAGGAGAAGTAA
Upstream 100 bases:
>100_bases CCTTAATTGACTGACCGGAGCCGGTGGAGCGGCTGCTGATTGCACTCTAGCCAGAGAAAATTGCCATGACACTGTCATCT TGTCGGTGCAGGTTGTTCCC
Downstream 100 bases:
>100_bases GTACTTGCTTTGCTAGCTCTGTCTGGCGCATGGTGCCGGTTTTCTGGAAGGTGCTTTTCAGCTGTGTGCGGACAGTGTGG ACAGAGAGAAAATGATTATC
Product: MutT/nudix family protein
Products: NA
Alternate protein names: Hydrolase NUDIX Family
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MKASSFLITLSLMLPSLQALSDCPRVLGQQDDRRANAGCLIIRDQQVLLITHRWGDKLGVPGGTLERGELAQCTAYRETL EETGLQVVVGERVQVMKNGFHLYRCIPAESLPEGEPLLLPAQARLEVSDIGWYSLDELRQKDWRFAYQFDLFMAVARKAM QSSSDSAAGDATGGLQEK
Sequences:
>Translated_178_residues MKASSFLITLSLMLPSLQALSDCPRVLGQQDDRRANAGCLIIRDQQVLLITHRWGDKLGVPGGTLERGELAQCTAYRETL EETGLQVVVGERVQVMKNGFHLYRCIPAESLPEGEPLLLPAQARLEVSDIGWYSLDELRQKDWRFAYQFDLFMAVARKAM QSSSDSAAGDATGGLQEK >Mature_178_residues MKASSFLITLSLMLPSLQALSDCPRVLGQQDDRRANAGCLIIRDQQVLLITHRWGDKLGVPGGTLERGELAQCTAYRETL EETGLQVVVGERVQVMKNGFHLYRCIPAESLPEGEPLLLPAQARLEVSDIGWYSLDELRQKDWRFAYQFDLFMAVARKAM QSSSDSAAGDATGGLQEK
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19742; Mature: 19742
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKASSFLITLSLMLPSLQALSDCPRVLGQQDDRRANAGCLIIRDQQVLLITHRWGDKLGV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCC PGGTLERGELAQCTAYRETLEETGLQVVVGERVQVMKNGFHLYRCIPAESLPEGEPLLLP CCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEECCCCCCCCCCCEEEC AQARLEVSDIGWYSLDELRQKDWRFAYQFDLFMAVARKAMQSSSDSAAGDATGGLQEK CCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKASSFLITLSLMLPSLQALSDCPRVLGQQDDRRANAGCLIIRDQQVLLITHRWGDKLGV CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEEECCCCCCCC PGGTLERGELAQCTAYRETLEETGLQVVVGERVQVMKNGFHLYRCIPAESLPEGEPLLLP CCCCCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCEEEEECCCCCCCCCCCEEEC AQARLEVSDIGWYSLDELRQKDWRFAYQFDLFMAVARKAMQSSSDSAAGDATGGLQEK CCCCEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA