| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835506
Identifier: 110835506
GI number: 110835506
Start: 2991954
End: 2992715
Strand: Reverse
Name: 110835506
Synonym: ABO_2645
Alternate gene names: NA
Gene position: 2992715-2991954 (Counterclockwise)
Preceding gene: 110835508
Following gene: 110835505
Centisome position: 95.92
GC content: 56.82
Gene sequence:
>762_bases ATGAAAGCAACCCGGCAAGTTCAAGATAAGCTGGCTTTGCCAGCAACAGAATCAGGAAAGGGGCCGCAGCCCGTGGTGTT AGTCCATGGCTGGACCTGTAACCGCAGGCACTGGCAGTCTCTGCTGGATTCCCCTCCGCAAGGGACACGGCTGATTGCTG TGGATCTGCCGGGGCATGGTGAGGCGCAGGAGCTGCCATTGTCTTCCTGGACAGTGAAGGCGCAGGCTCAGGCGTTGGTG TCCGCTCTTGCCGATATCGATAACCCTGTGTTGGTGGGGCACTCCATGGGGGGCGCCGTGGTGCTGGAGGCTGCCCGGTT AAAGCCGGTTAAAGCCGTAGTGTTGGTTGACACCTTTGTTATCCCCTACGGTGATCTGGATGAAGAAACCGCCCGCCAGA TTGAGACCCCCTTTCAGGACAATTTTGTTTCCGGCATTGCTAATTTGGTGGCGAACAATGCTGGCCCGGACTTGAGTGAG CAGGAGAAACAAACGCTAGAACGCGAGATGGCTGCGGCGCGTCAGGATGCCATGTTGCCGCTGTGGTCGGATTTGTTGCG ATGGTCCCCTAATGCGGCTTTCGCTGAAATAAACTGTCCCATTCATGCCATTAACGGTGATTTGGTGGGTGAGGCTGCCC GTGCTCGCTGCGCCCCCTATGTAACAGAGTGGTTGCAAGCGGGCACCTGGCATTTTCCGCAGATGGAACAACCGGAGGTA TTTGCCGATCGTCTTAACCGCGTGCTGAAGTCGTGTGGCTAA
Upstream 100 bases:
>100_bases CATTGGTTGTATTCCCCTAATGAAGCCTTAATTTATCCGATTTGGACCGGAAATTGAATGTAAATAACAGATGTGGCCCT TTGGGGAATAGGAGAAGCAG
Downstream 100 bases:
>100_bases GCGAGAGTTATTGAAACTCGGCTAAGCGCGCCCATAGGGGGTCTGGATCTGTATTCTAAAGCGCTTTTGTTGGGTGGTGT TATTGGGGGTTCTGTAAGGT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolase Alpha/Beta Fold Family
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MKATRQVQDKLALPATESGKGPQPVVLVHGWTCNRRHWQSLLDSPPQGTRLIAVDLPGHGEAQELPLSSWTVKAQAQALV SALADIDNPVLVGHSMGGAVVLEAARLKPVKAVVLVDTFVIPYGDLDEETARQIETPFQDNFVSGIANLVANNAGPDLSE QEKQTLEREMAAARQDAMLPLWSDLLRWSPNAAFAEINCPIHAINGDLVGEAARARCAPYVTEWLQAGTWHFPQMEQPEV FADRLNRVLKSCG
Sequences:
>Translated_253_residues MKATRQVQDKLALPATESGKGPQPVVLVHGWTCNRRHWQSLLDSPPQGTRLIAVDLPGHGEAQELPLSSWTVKAQAQALV SALADIDNPVLVGHSMGGAVVLEAARLKPVKAVVLVDTFVIPYGDLDEETARQIETPFQDNFVSGIANLVANNAGPDLSE QEKQTLEREMAAARQDAMLPLWSDLLRWSPNAAFAEINCPIHAINGDLVGEAARARCAPYVTEWLQAGTWHFPQMEQPEV FADRLNRVLKSCG >Mature_253_residues MKATRQVQDKLALPATESGKGPQPVVLVHGWTCNRRHWQSLLDSPPQGTRLIAVDLPGHGEAQELPLSSWTVKAQAQALV SALADIDNPVLVGHSMGGAVVLEAARLKPVKAVVLVDTFVIPYGDLDEETARQIETPFQDNFVSGIANLVANNAGPDLSE QEKQTLEREMAAARQDAMLPLWSDLLRWSPNAAFAEINCPIHAINGDLVGEAARARCAPYVTEWLQAGTWHFPQMEQPEV FADRLNRVLKSCG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27581; Mature: 27581
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATRQVQDKLALPATESGKGPQPVVLVHGWTCNRRHWQSLLDSPPQGTRLIAVDLPGHG CCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCC EAQELPLSSWTVKAQAQALVSALADIDNPVLVGHSMGGAVVLEAARLKPVKAVVLVDTFV CHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHCCCCEEEEEEHHHC IPYGDLDEETARQIETPFQDNFVSGIANLVANNAGPDLSEQEKQTLEREMAAARQDAMLP CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCH LWSDLLRWSPNAAFAEINCPIHAINGDLVGEAARARCAPYVTEWLQAGTWHFPQMEQPEV HHHHHHHCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FADRLNRVLKSCG HHHHHHHHHHHCC >Mature Secondary Structure MKATRQVQDKLALPATESGKGPQPVVLVHGWTCNRRHWQSLLDSPPQGTRLIAVDLPGHG CCCHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCC EAQELPLSSWTVKAQAQALVSALADIDNPVLVGHSMGGAVVLEAARLKPVKAVVLVDTFV CHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEHHHCCCCEEEEEEHHHC IPYGDLDEETARQIETPFQDNFVSGIANLVANNAGPDLSEQEKQTLEREMAAARQDAMLP CCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCH LWSDLLRWSPNAAFAEINCPIHAINGDLVGEAARARCAPYVTEWLQAGTWHFPQMEQPEV HHHHHHHCCCCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH FADRLNRVLKSCG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA