Click here to switch to the map view.

The map label for this gene is 110835481

Identifier: 110835481

GI number: 110835481

Start: 2965181

End: 2965648

Strand: Direct

Name: 110835481

Synonym: ABO_2620

Alternate gene names: NA

Gene position: 2965181-2965648 (Clockwise)

Preceding gene: 110835480

Following gene: 110835482

Centisome position: 95.03

GC content: 55.56

Gene sequence:

>468_bases
ATGCCCGCCCGCGCTCTGGCAGATTTTCTCGACAACAACAAGGTCAGCTACCACTGCTACAACCACGCGCCCGCCGTTAC
CGCCTCTGAAGTAGCGCAATCCGCTCATATACCCAGCCGAAATATGGCCAAACCGGTGATTGTTGAAGCAGATGGCGAAC
TGGTTATGGCCGTACTCCCCGCCAATCACTATCTGGACCCTAACAAACTGCGCCAGGCCCTCAACGCCAATCACGTTAAG
CTAGCCAACGAAGACCATTTCAAGGGCCGTTTCCCACTTTGCGAACCTGGCGGCGAGCCGCCTTTCGGCAATCTGTACGG
CATGAAGGTGTATGTGGACAACACCTTGCTCAGCGAAGACTGGTTGGCCTTCAATGCAGGCACACACACCGAAGTGATAA
CAATGGGCATGGGCGATTTTCTTCGTCTCAGCCAGGCGCAGGCCTGTGCCTTCGCCATGCTTCATTAG

Upstream 100 bases:

>100_bases
TAAACATACCGTCACGGAGCGTGTTCTCGCTTCAGCCACCAGCTGTTTGTTAGCCCCCGCTCCCCGAGCCCGGCCATCCT
GTTCCGGGAGGAGGTTTATC

Downstream 100 bases:

>100_bases
ACATCACGGGTAAAGCCCCTTACATCGCCACCGGCATCCCCTTTCCCCGTTCGGCTGAACGGGGCTTTCTTTTCTCCCAT
CGTCATACCATTCGCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: YbaK/Aminoacyl-TRNA Synthetase Associated Region

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MPARALADFLDNNKVSYHCYNHAPAVTASEVAQSAHIPSRNMAKPVIVEADGELVMAVLPANHYLDPNKLRQALNANHVK
LANEDHFKGRFPLCEPGGEPPFGNLYGMKVYVDNTLLSEDWLAFNAGTHTEVITMGMGDFLRLSQAQACAFAMLH

Sequences:

>Translated_155_residues
MPARALADFLDNNKVSYHCYNHAPAVTASEVAQSAHIPSRNMAKPVIVEADGELVMAVLPANHYLDPNKLRQALNANHVK
LANEDHFKGRFPLCEPGGEPPFGNLYGMKVYVDNTLLSEDWLAFNAGTHTEVITMGMGDFLRLSQAQACAFAMLH
>Mature_154_residues
PARALADFLDNNKVSYHCYNHAPAVTASEVAQSAHIPSRNMAKPVIVEADGELVMAVLPANHYLDPNKLRQALNANHVKL
ANEDHFKGRFPLCEPGGEPPFGNLYGMKVYVDNTLLSEDWLAFNAGTHTEVITMGMGDFLRLSQAQACAFAMLH

Specific function: Unknown

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17007; Mature: 16875

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPARALADFLDNNKVSYHCYNHAPAVTASEVAQSAHIPSRNMAKPVIVEADGELVMAVLP
CCHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEC
ANHYLDPNKLRQALNANHVKLANEDHFKGRFPLCEPGGEPPFGNLYGMKVYVDNTLLSED
CCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCC
WLAFNAGTHTEVITMGMGDFLRLSQAQACAFAMLH
CEEECCCCCEEEEEECCCHHHHHHHHHHHHHEECC
>Mature Secondary Structure 
PARALADFLDNNKVSYHCYNHAPAVTASEVAQSAHIPSRNMAKPVIVEADGELVMAVLP
CHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEC
ANHYLDPNKLRQALNANHVKLANEDHFKGRFPLCEPGGEPPFGNLYGMKVYVDNTLLSED
CCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCEEECCC
WLAFNAGTHTEVITMGMGDFLRLSQAQACAFAMLH
CEEECCCCCEEEEEECCCHHHHHHHHHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA