| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pykA [H]
Identifier: 110835482
GI number: 110835482
Start: 2965863
End: 2967356
Strand: Direct
Name: pykA [H]
Synonym: ABO_2621
Alternate gene names: 110835482
Gene position: 2965863-2967356 (Clockwise)
Preceding gene: 110835481
Following gene: 110835483
Centisome position: 95.06
GC content: 59.24
Gene sequence:
>1494_bases ATGATTGCCGGAAAGATACGCATGCCTCCTCGCACCTCTCAGCACCCGCTGCGCCGCACCAAAATTGTTGCCACCGTTGG CCCCGCCTCTGCCCCCCTCTCCATGCTCGATACGCTGATTGGGGCGGGCGTTAATGTGTTTCGGCTGAACTTTTCCCACG GCACCGCAGACACCCATCGCGATACCGCCGAACAGATTCGCCATTGCGCCGAGCAACGCGGCGAACACGTAGCGATACTG GCCGACCTGCAAGGGCCTAAGATCCGCATTGGCTGCTTTCGCGACGGCCCCATCATGCTCACCGCCGGCCAACCCTTTAC GCTTGATACTGCTCTGTCAGATGACGCAGGCGATACCGAGCAGGTCGGCGTCAGTTACCCACCACTACCCAGCGACTGTG AACCCGGCGATATCCTGCTGCTCAATGACGGCCTGCTAGAACTCGAAGTAAACACCATCAACCGCACCCGGGTGGAATGC ACGGTGCGCGTGGGCGGTGAACTCTCGGATCATAAAGGCGTAAACCGCAAAGGTGGCGGCCTCAGTGCCCGCGCCCTTAC CGAGAAAGACCTGGCGGATATCATCACCGCCGCCGACATGGAGGTGGATTTTCTCGCGCTCTCCTTTCCCCGCGACGCGG AGGATGTAAACGAAGCACGCCGCCGTTATCAGGAAGCCGGCGGCAAAGGTGACATCATTGCCAAAATCGAACGCGCCGAA GCCGTGGCAGACGACGACACCTTGGATGCCATTATCAATGCCTCCGACGGAGTGATGGTGGCGCGTGGCGATTTGGCCGT GGAAATTGGTGATGCGGAACTTGTCGGCGTGCAGAAGCACATCATCCGCCGGGCACGAGCGTTAAATCGCTTCGTGATTA CTGCCACCCAGATGATGGAATCCATGATCCACAGCCCACAACCCACCCGGGCAGAGGTCTCAGACGTAGCCAACGCGGTA CTCGACGGCACCGACGCCGTCATGCTGTCAGCGGAAACCGCGGTCGGCGACTTTCCCAAAGAAACCGTACAGGCCATGGA CCGGATCATCCTTGGCGCCGAGCGTACCTGGCAGGAACGCAGGGCTGATCGGCCGATCAACGACAACGCCGACAACATTG ACGAAGTGATCGCCATGGCCGCCATGCAGGCAGCCAACCGACTCAGCAACGTGGCCGCCATTATTGCCATGACGGAAACT GGTAACACCCCGCGGCTAATGTCTCGATTACGCTCTGGCATGCCCATCTATGCATTCACCCCCTACCCCTCCAGCCAGCG CCGAGTCGCCATTTTACGTGGTGTATATGCCATGCCCTTCGACAGTCACGCACTGGCTAGCGACACCGTCAACCGCAAAG CGGTGAGCATGTTAGAAGACATGGGCGTAGTGCAGACTGGCGACCGGATACTGATCACCAAGGGCAATTATGCCGACGCC CACGGTGGCACCAATACCCTGAAAATCGTCGAGGTCGGCAGTAACATTCAATAA
Upstream 100 bases:
>100_bases CACCGGCCTGCGAGACCCTTTTGAGAAATCATGCTGACACCACAAAGAAGCCTGCAGACTGTCATCGTTCGTTCGCTTCT GCGTGGTATGCTAATTCGAA
Downstream 100 bases:
>100_bases TTCTTTTGCGGAGCCTTCATGCCATTTCCGTTGTGAAGGCTCCGGCTCTGCACCCTAAAGAGCAAAACGCTCGCTCTGCC AAAAAAACCGCAAATTTTTT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK-2 [H]
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MIAGKIRMPPRTSQHPLRRTKIVATVGPASAPLSMLDTLIGAGVNVFRLNFSHGTADTHRDTAEQIRHCAEQRGEHVAIL ADLQGPKIRIGCFRDGPIMLTAGQPFTLDTALSDDAGDTEQVGVSYPPLPSDCEPGDILLLNDGLLELEVNTINRTRVEC TVRVGGELSDHKGVNRKGGGLSARALTEKDLADIITAADMEVDFLALSFPRDAEDVNEARRRYQEAGGKGDIIAKIERAE AVADDDTLDAIINASDGVMVARGDLAVEIGDAELVGVQKHIIRRARALNRFVITATQMMESMIHSPQPTRAEVSDVANAV LDGTDAVMLSAETAVGDFPKETVQAMDRIILGAERTWQERRADRPINDNADNIDEVIAMAAMQAANRLSNVAAIIAMTET GNTPRLMSRLRSGMPIYAFTPYPSSQRRVAILRGVYAMPFDSHALASDTVNRKAVSMLEDMGVVQTGDRILITKGNYADA HGGTNTLKIVEVGSNIQ
Sequences:
>Translated_497_residues MIAGKIRMPPRTSQHPLRRTKIVATVGPASAPLSMLDTLIGAGVNVFRLNFSHGTADTHRDTAEQIRHCAEQRGEHVAIL ADLQGPKIRIGCFRDGPIMLTAGQPFTLDTALSDDAGDTEQVGVSYPPLPSDCEPGDILLLNDGLLELEVNTINRTRVEC TVRVGGELSDHKGVNRKGGGLSARALTEKDLADIITAADMEVDFLALSFPRDAEDVNEARRRYQEAGGKGDIIAKIERAE AVADDDTLDAIINASDGVMVARGDLAVEIGDAELVGVQKHIIRRARALNRFVITATQMMESMIHSPQPTRAEVSDVANAV LDGTDAVMLSAETAVGDFPKETVQAMDRIILGAERTWQERRADRPINDNADNIDEVIAMAAMQAANRLSNVAAIIAMTET GNTPRLMSRLRSGMPIYAFTPYPSSQRRVAILRGVYAMPFDSHALASDTVNRKAVSMLEDMGVVQTGDRILITKGNYADA HGGTNTLKIVEVGSNIQ >Mature_497_residues MIAGKIRMPPRTSQHPLRRTKIVATVGPASAPLSMLDTLIGAGVNVFRLNFSHGTADTHRDTAEQIRHCAEQRGEHVAIL ADLQGPKIRIGCFRDGPIMLTAGQPFTLDTALSDDAGDTEQVGVSYPPLPSDCEPGDILLLNDGLLELEVNTINRTRVEC TVRVGGELSDHKGVNRKGGGLSARALTEKDLADIITAADMEVDFLALSFPRDAEDVNEARRRYQEAGGKGDIIAKIERAE AVADDDTLDAIINASDGVMVARGDLAVEIGDAELVGVQKHIIRRARALNRFVITATQMMESMIHSPQPTRAEVSDVANAV LDGTDAVMLSAETAVGDFPKETVQAMDRIILGAERTWQERRADRPINDNADNIDEVIAMAAMQAANRLSNVAAIIAMTET GNTPRLMSRLRSGMPIYAFTPYPSSQRRVAILRGVYAMPFDSHALASDTVNRKAVSMLEDMGVVQTGDRILITKGNYADA HGGTNTLKIVEVGSNIQ
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286422, Length=503, Percent_Identity=35.7852882703777, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI33286420, Length=503, Percent_Identity=35.7852882703777, Blast_Score=262, Evalue=7e-70, Organism=Homo sapiens, GI33286418, Length=509, Percent_Identity=35.9528487229862, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI10835121, Length=497, Percent_Identity=36.0160965794769, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI32967597, Length=497, Percent_Identity=36.0160965794769, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI310128732, Length=302, Percent_Identity=35.7615894039735, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI310128730, Length=302, Percent_Identity=35.7615894039735, Blast_Score=155, Evalue=6e-38, Organism=Homo sapiens, GI310128736, Length=248, Percent_Identity=34.2741935483871, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310128734, Length=248, Percent_Identity=34.2741935483871, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI310128738, Length=215, Percent_Identity=33.4883720930233, Blast_Score=105, Evalue=1e-22, Organism=Escherichia coli, GI1788160, Length=478, Percent_Identity=54.3933054393305, Blast_Score=487, Evalue=1e-139, Organism=Escherichia coli, GI1787965, Length=479, Percent_Identity=37.5782881002088, Blast_Score=277, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17544584, Length=493, Percent_Identity=36.7139959432049, Blast_Score=276, Evalue=2e-74, Organism=Caenorhabditis elegans, GI17506829, Length=497, Percent_Identity=36.0160965794769, Blast_Score=244, Evalue=8e-65, Organism=Caenorhabditis elegans, GI71984413, Length=497, Percent_Identity=36.0160965794769, Blast_Score=244, Evalue=9e-65, Organism=Caenorhabditis elegans, GI71984406, Length=497, Percent_Identity=36.0160965794769, Blast_Score=244, Evalue=1e-64, Organism=Caenorhabditis elegans, GI17506831, Length=497, Percent_Identity=36.0160965794769, Blast_Score=243, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6324923, Length=489, Percent_Identity=33.7423312883436, Blast_Score=241, Evalue=1e-64, Organism=Saccharomyces cerevisiae, GI6319279, Length=494, Percent_Identity=34.412955465587, Blast_Score=241, Evalue=1e-64, Organism=Drosophila melanogaster, GI28571814, Length=492, Percent_Identity=35.3658536585366, Blast_Score=265, Evalue=4e-71, Organism=Drosophila melanogaster, GI24648964, Length=492, Percent_Identity=35.3658536585366, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI24581235, Length=488, Percent_Identity=33.6065573770492, Blast_Score=231, Evalue=1e-60, Organism=Drosophila melanogaster, GI24648966, Length=451, Percent_Identity=35.4767184035477, Blast_Score=226, Evalue=2e-59, Organism=Drosophila melanogaster, GI24646914, Length=315, Percent_Identity=35.2380952380952, Blast_Score=154, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 53607; Mature: 53607
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAGKIRMPPRTSQHPLRRTKIVATVGPASAPLSMLDTLIGAGVNVFRLNFSHGTADTHR CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCH DTAEQIRHCAEQRGEHVAILADLQGPKIRIGCFRDGPIMLTAGQPFTLDTALSDDAGDTE HHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCH QVGVSYPPLPSDCEPGDILLLNDGLLELEVNTINRTRVECTVRVGGELSDHKGVNRKGGG HCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCC LSARALTEKDLADIITAADMEVDFLALSFPRDAEDVNEARRRYQEAGGKGDIIAKIERAE CEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHH AVADDDTLDAIINASDGVMVARGDLAVEIGDAELVGVQKHIIRRARALNRFVITATQMME HHCCCCHHHHHEECCCCEEEEECCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH SMIHSPQPTRAEVSDVANAVLDGTDAVMLSAETAVGDFPKETVQAMDRIILGAERTWQER HHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHCCCCCHHHHHHHHHHHHCCHHHHHHH RADRPINDNADNIDEVIAMAAMQAANRLSNVAAIIAMTETGNTPRLMSRLRSGMPIYAFT HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHCCCCEEEEC PYPSSQRRVAILRGVYAMPFDSHALASDTVNRKAVSMLEDMGVVQTGDRILITKGNYADA CCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCC HGGTNTLKIVEVGSNIQ CCCCCEEEEEECCCCCC >Mature Secondary Structure MIAGKIRMPPRTSQHPLRRTKIVATVGPASAPLSMLDTLIGAGVNVFRLNFSHGTADTHR CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCH DTAEQIRHCAEQRGEHVAILADLQGPKIRIGCFRDGPIMLTAGQPFTLDTALSDDAGDTE HHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEECCCCEEEECCCCEEEECCCCCCCCCCH QVGVSYPPLPSDCEPGDILLLNDGLLELEVNTINRTRVECTVRVGGELSDHKGVNRKGGG HCCCCCCCCCCCCCCCCEEEEECCEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCC LSARALTEKDLADIITAADMEVDFLALSFPRDAEDVNEARRRYQEAGGKGDIIAKIERAE CEEHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEHHHH AVADDDTLDAIINASDGVMVARGDLAVEIGDAELVGVQKHIIRRARALNRFVITATQMME HHCCCCHHHHHEECCCCEEEEECCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHH SMIHSPQPTRAEVSDVANAVLDGTDAVMLSAETAVGDFPKETVQAMDRIILGAERTWQER HHHCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHCCCCCHHHHHHHHHHHHCCHHHHHHH RADRPINDNADNIDEVIAMAAMQAANRLSNVAAIIAMTETGNTPRLMSRLRSGMPIYAFT HCCCCCCCCCCCHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCHHHHHHHHCCCCEEEEC PYPSSQRRVAILRGVYAMPFDSHALASDTVNRKAVSMLEDMGVVQTGDRILITKGNYADA CCCCCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHHHHHCCCEECCCEEEEEECCCCCC HGGTNTLKIVEVGSNIQ CCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 1732206; 1859631; 8439398 [H]