Click here to switch to the map view.

The map label for this gene is amiC [H]

Identifier: 110835370

GI number: 110835370

Start: 2845046

End: 2846344

Strand: Direct

Name: amiC [H]

Synonym: ABO_2509

Alternate gene names: 110835370

Gene position: 2845046-2846344 (Clockwise)

Preceding gene: 110835369

Following gene: 110835371

Centisome position: 91.18

GC content: 53.12

Gene sequence:

>1299_bases
ATGAGTTTTTCACAATCCATGAAGAAAGTAGCTGCCGGGGTTATCGCCTCCAGCGCCATTGCCTATAGCGGTGTCGTTAT
GGCCGCCGACACCATCAAGGTCGGGGTGCTGCACTCTCTGTCCGGCACGATGGCTATCAGTGAATCCACACTGAAAGACA
CCGTTCTGATGATGATCGAAGAACAGAATAAAAAGGGCGGAGTCATGGGCAAAAAGCTTGAGCCCGTTGTGGTTGACCCC
GCCTCGAACTGGCCGCTGTTTGCAGAAAAAACCCGTGAGCTGATCACCCAAGAAAACGTGGACGTTATTTTTGGCTGCTG
GACATCGGTATCGCGCAAGTCCGTATTGCCCGTAGTGGAAGAGCTGAACGGGTTGTTGTTCTACCCGGTCCAGTATGAAG
GTGAAGAGTCGTCCAAGAATGTCTTCTATACCGGTGCAGCACCCAATCAGCAGGCGATCCCTGCGGTGGATTACCTGATC
AACGATCTGGAGGTTGAACGCTTCGTTCTTGCCGGGACCGATTACGTTTATCCGCGCACCACTAACAAGATTCTGGAAGC
TTACTTGAAGTCCAAAGGCGTGTCCGAAAAGGACATCATGATCAACTACACCCCGTTCGGACATTCTGACTGGCAGAGCA
TCGTCAGCGAAATTAAAGCCTTCGGTAGCCAAGGCAAAAAAACCGCTGTGGTCTCCACAGTGAACGGCGATGCCAATGTG
CCTTTCTATAAAGAGCTGGGCAACCAAGGAGTGAGCGCCGAAGACATTCCCGTGGTGGCCTTCTCTGTAGGTGAAGAAGA
GCTATCGGGCATCGACACCGGCCCGCTGGTTGGCCATCTGGCTGCTTGGAACTATTTCCAAAGCGTCTACAACGATACCA
ACAACGCTTTTATTGACCAGTGGCACGCCTATACCGGTGACGACAAGCGCGTGACCAATGACCCTATGGAAGCAACCTAC
ATCGGCTTCAATATGTGGGTGAAGGCGGTTGAAAAGGCTCAATCTACCGACACCGATAAAGTGGCTGACGCCATGATCGG
CATCAAGACCCCCAACCTGACCGGCGGCACAGCGGTGATGAACAAGAACCACCACCTATCTAAGCCCGTATTGATCGGTG
AAATTCAGGATGACGGTCAGTTCGCCGTTGTCTGGGAAACCGAAGGGTTGGTGCAAGGTGATGCCTGGTCTGATTTCCTG
CCGGGCTCCAAAGACCTGATCTCCGACTGGACCGCACCGACTCGTTGCGGCAACTACAACACCAAGACCAACACCTGTGG
CGGTGCTTCTGCCGAGTAA

Upstream 100 bases:

>100_bases
GAGGGAAACAACAAGCCAGTGAGCCAACAGGAGTAGGAAGGAGGGTTCACGGCAATACAAACGCCCATTTAAACGCGACT
GAGAAGCAAGGAGAAATACC

Downstream 100 bases:

>100_bases
GGCTGCACGCAACAGCACTCTGGGCAACGCCCAGGGTGCTCGTCGCTTAGACCAACATTACGCATAACACATGAAGCCAG
CACCAGAACAGTGGCCATCG

Product: branched-chain amino acid ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSFSQSMKKVAAGVIASSAIAYSGVVMAADTIKVGVLHSLSGTMAISESTLKDTVLMMIEEQNKKGGVMGKKLEPVVVDP
ASNWPLFAEKTRELITQENVDVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLI
NDLEVERFVLAGTDYVYPRTTNKILEAYLKSKGVSEKDIMINYTPFGHSDWQSIVSEIKAFGSQGKKTAVVSTVNGDANV
PFYKELGNQGVSAEDIPVVAFSVGEEELSGIDTGPLVGHLAAWNYFQSVYNDTNNAFIDQWHAYTGDDKRVTNDPMEATY
IGFNMWVKAVEKAQSTDTDKVADAMIGIKTPNLTGGTAVMNKNHHLSKPVLIGEIQDDGQFAVVWETEGLVQGDAWSDFL
PGSKDLISDWTAPTRCGNYNTKTNTCGGASAE

Sequences:

>Translated_432_residues
MSFSQSMKKVAAGVIASSAIAYSGVVMAADTIKVGVLHSLSGTMAISESTLKDTVLMMIEEQNKKGGVMGKKLEPVVVDP
ASNWPLFAEKTRELITQENVDVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLI
NDLEVERFVLAGTDYVYPRTTNKILEAYLKSKGVSEKDIMINYTPFGHSDWQSIVSEIKAFGSQGKKTAVVSTVNGDANV
PFYKELGNQGVSAEDIPVVAFSVGEEELSGIDTGPLVGHLAAWNYFQSVYNDTNNAFIDQWHAYTGDDKRVTNDPMEATY
IGFNMWVKAVEKAQSTDTDKVADAMIGIKTPNLTGGTAVMNKNHHLSKPVLIGEIQDDGQFAVVWETEGLVQGDAWSDFL
PGSKDLISDWTAPTRCGNYNTKTNTCGGASAE
>Mature_431_residues
SFSQSMKKVAAGVIASSAIAYSGVVMAADTIKVGVLHSLSGTMAISESTLKDTVLMMIEEQNKKGGVMGKKLEPVVVDPA
SNWPLFAEKTRELITQENVDVIFGCWTSVSRKSVLPVVEELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLIN
DLEVERFVLAGTDYVYPRTTNKILEAYLKSKGVSEKDIMINYTPFGHSDWQSIVSEIKAFGSQGKKTAVVSTVNGDANVP
FYKELGNQGVSAEDIPVVAFSVGEEELSGIDTGPLVGHLAAWNYFQSVYNDTNNAFIDQWHAYTGDDKRVTNDPMEATYI
GFNMWVKAVEKAQSTDTDKVADAMIGIKTPNLTGGTAVMNKNHHLSKPVLIGEIQDDGQFAVVWETEGLVQGDAWSDFLP
GSKDLISDWTAPTRCGNYNTKTNTCGGASAE

Specific function: Negatively regulates the expression of the aliphatic amidase operon. AmiC functions by inhibiting the action of AmiR at the protein level. It exhibits protein kinase activity [H]

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000709 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46927; Mature: 46796

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSQSMKKVAAGVIASSAIAYSGVVMAADTIKVGVLHSLSGTMAISESTLKDTVLMMIE
CCHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCEEECHHHHHHEEEEEEE
EQNKKGGVMGKKLEPVVVDPASNWPLFAEKTRELITQENVDVIFGCWTSVSRKSVLPVVE
CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
ELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLINDLEVERFVLAGTDYVYPRT
HCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEECCCEECCCC
TNKILEAYLKSKGVSEKDIMINYTPFGHSDWQSIVSEIKAFGSQGKKTAVVSTVNGDANV
HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PFYKELGNQGVSAEDIPVVAFSVGEEELSGIDTGPLVGHLAAWNYFQSVYNDTNNAFIDQ
CHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
WHAYTGDDKRVTNDPMEATYIGFNMWVKAVEKAQSTDTDKVADAMIGIKTPNLTGGTAVM
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEEE
NKNHHLSKPVLIGEIQDDGQFAVVWETEGLVQGDAWSDFLPGSKDLISDWTAPTRCGNYN
CCCCCCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCC
TKTNTCGGASAE
CCCCCCCCCCCC
>Mature Secondary Structure 
SFSQSMKKVAAGVIASSAIAYSGVVMAADTIKVGVLHSLSGTMAISESTLKDTVLMMIE
CHHHHHHHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCCCCEEECHHHHHHEEEEEEE
EQNKKGGVMGKKLEPVVVDPASNWPLFAEKTRELITQENVDVIFGCWTSVSRKSVLPVVE
CCCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
ELNGLLFYPVQYEGEESSKNVFYTGAAPNQQAIPAVDYLINDLEVERFVLAGTDYVYPRT
HCCCEEEEEEEECCCCCCCCEEEECCCCCCCCCHHHHHHHHHHCEEEEEEECCCEECCCC
TNKILEAYLKSKGVSEKDIMINYTPFGHSDWQSIVSEIKAFGSQGKKTAVVSTVNGDANV
HHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PFYKELGNQGVSAEDIPVVAFSVGEEELSGIDTGPLVGHLAAWNYFQSVYNDTNNAFIDQ
CHHHHHCCCCCCCCCCCEEEEECCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHH
WHAYTGDDKRVTNDPMEATYIGFNMWVKAVEKAQSTDTDKVADAMIGIKTPNLTGGTAVM
CCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCEEEE
NKNHHLSKPVLIGEIQDDGQFAVVWETEGLVQGDAWSDFLPGSKDLISDWTAPTRCGNYN
CCCCCCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCCCCCHHHHHCCCCCCCCCCCC
TKTNTCGGASAE
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1907262; 10984043; 1762155; 7813419; 10508151; 10708652 [H]