| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yqkF [H]
Identifier: 110835364
GI number: 110835364
Start: 2839747
End: 2840544
Strand: Direct
Name: yqkF [H]
Synonym: ABO_2503
Alternate gene names: 110835364
Gene position: 2839747-2840544 (Clockwise)
Preceding gene: 110835363
Following gene: 110835365
Centisome position: 91.01
GC content: 55.76
Gene sequence:
>798_bases ATGTCCTTCATGCGCCCACTGGGCAACACAGGATTAACCGTCAGTGCACTGGGCTTGGGCACAGTGAAAATCGGCCGCGA TAAGGGAGTGAAGTACCCCAACAGCTTCACCATCCCCGATGATCGTGCGGTAACAGAACTACTCGCTCAGGCACAGGATT TGGGCATCAACCTAATCGACACAGCGCCGGCCTACGGTCACAGTGAACAGCGGCTCGGTCAGTTAATGAGCCAACGCCAA GACTGGGTCATCGTCACCAAGGTCGGTGAAGAATTTGATAACAACAGTGGTGACAGCCATTTTGATTTTTCACCGGAACA CGTGCGTTTCTCGGTGGAACGTAGCCTGCAACGGCTCAACACGGACTATCTGGATTGCGTGCTGATTCACTCCGACGGCA ATGACCTGGCAATCATCGAAAAGGGCACTCTGGACGCTCTCAACGACCTGAAAAAAGCCGGCCTGATCCGCGCCACAGGC ATGTCCACGAAAACCGTGGCTGGCGGCATCGCCAGCCTGAATCACGCGGACATGGCCATGGTCACCTACAACCTGCATCA GCAAGACGAAGCCCCCGTGATCGAGCACGCCGCCGCCCGGCAAAAAGGCATCCTAATCAAGAAGGCCTTTGCCAGCGGTC ACCTCAATGACACCCTTGATGACCCGGTACAGGAAAGTCTGGACCAAATCCTTGGCATCGCCGGCGTTAGCAGTATCATT GCTGGCACCATTAACCCCGCCCACTTACAAGAAAACGTGGCCAAAGCCCGGCAGGCCTGCAAGATGGCAGCGCAATAA
Upstream 100 bases:
>100_bases ATGGACACAAGTCCAGCGTCGCTACTGAACCGAAAACTTGCAACCGTTCCTCATCACACCGCTAGCAACGGACCTGCAGC GACACCAATAAGGAAGCATC
Downstream 100 bases:
>100_bases TAACAACAGGAAACAGCATGCGTTTTTGTCTGATGATTCTGCTACTCGGCTCCTGCCTCGCAGCACAGGCGGATAAAATA CGGCTACTGCGCGAAGCCCC
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSFMRPLGNTGLTVSALGLGTVKIGRDKGVKYPNSFTIPDDRAVTELLAQAQDLGINLIDTAPAYGHSEQRLGQLMSQRQ DWVIVTKVGEEFDNNSGDSHFDFSPEHVRFSVERSLQRLNTDYLDCVLIHSDGNDLAIIEKGTLDALNDLKKAGLIRATG MSTKTVAGGIASLNHADMAMVTYNLHQQDEAPVIEHAAARQKGILIKKAFASGHLNDTLDDPVQESLDQILGIAGVSSII AGTINPAHLQENVAKARQACKMAAQ
Sequences:
>Translated_265_residues MSFMRPLGNTGLTVSALGLGTVKIGRDKGVKYPNSFTIPDDRAVTELLAQAQDLGINLIDTAPAYGHSEQRLGQLMSQRQ DWVIVTKVGEEFDNNSGDSHFDFSPEHVRFSVERSLQRLNTDYLDCVLIHSDGNDLAIIEKGTLDALNDLKKAGLIRATG MSTKTVAGGIASLNHADMAMVTYNLHQQDEAPVIEHAAARQKGILIKKAFASGHLNDTLDDPVQESLDQILGIAGVSSII AGTINPAHLQENVAKARQACKMAAQ >Mature_264_residues SFMRPLGNTGLTVSALGLGTVKIGRDKGVKYPNSFTIPDDRAVTELLAQAQDLGINLIDTAPAYGHSEQRLGQLMSQRQD WVIVTKVGEEFDNNSGDSHFDFSPEHVRFSVERSLQRLNTDYLDCVLIHSDGNDLAIIEKGTLDALNDLKKAGLIRATGM STKTVAGGIASLNHADMAMVTYNLHQQDEAPVIEHAAARQKGILIKKAFASGHLNDTLDDPVQESLDQILGIAGVSSIIA GTINPAHLQENVAKARQACKMAAQ
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788070, Length=168, Percent_Identity=36.9047619047619, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI87081735, Length=164, Percent_Identity=36.5853658536585, Blast_Score=77, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6323684, Length=134, Percent_Identity=36.5671641791045, Blast_Score=72, Evalue=6e-14, Organism=Drosophila melanogaster, GI24646155, Length=250, Percent_Identity=30, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24646159, Length=170, Percent_Identity=35.2941176470588, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 28571; Mature: 28439
Theoretical pI: Translated: 5.79; Mature: 5.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFMRPLGNTGLTVSALGLGTVKIGRDKGVKYPNSFTIPDDRAVTELLAQAQDLGINLID CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE TAPAYGHSEQRLGQLMSQRQDWVIVTKVGEEFDNNSGDSHFDFSPEHVRFSVERSLQRLN CCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHEEHHHHHHHHHC TDYLDCVLIHSDGNDLAIIEKGTLDALNDLKKAGLIRATGMSTKTVAGGIASLNHADMAM CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCHHHHCHHHHCCCCCEEE VTYNLHQQDEAPVIEHAAARQKGILIKKAFASGHLNDTLDDPVQESLDQILGIAGVSSII EEEECCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGTINPAHLQENVAKARQACKMAAQ HCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFMRPLGNTGLTVSALGLGTVKIGRDKGVKYPNSFTIPDDRAVTELLAQAQDLGINLID CCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE TAPAYGHSEQRLGQLMSQRQDWVIVTKVGEEFDNNSGDSHFDFSPEHVRFSVERSLQRLN CCCCCCCCHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCCHHHHEEHHHHHHHHHC TDYLDCVLIHSDGNDLAIIEKGTLDALNDLKKAGLIRATGMSTKTVAGGIASLNHADMAM CCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHCCEEECCCCCHHHHCHHHHCCCCCEEE VTYNLHQQDEAPVIEHAAARQKGILIKKAFASGHLNDTLDDPVQESLDQILGIAGVSSII EEEECCCCCCCCHHHHHHHHHCCCEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH AGTINPAHLQENVAKARQACKMAAQ HCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]