Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

Click here to switch to the map view.

The map label for this gene is 110835363

Identifier: 110835363

GI number: 110835363

Start: 2838296

End: 2839504

Strand: Direct

Name: 110835363

Synonym: ABO_2502

Alternate gene names: NA

Gene position: 2838296-2839504 (Clockwise)

Preceding gene: 110835361

Following gene: 110835364

Centisome position: 90.97

GC content: 58.4

Gene sequence:

>1209_bases
ATGAGTGACTCGACCCTAAAACCCGACACAATCCACCCAGACATTGTGGTCTTTGGTGGCGGCATTGCCGGCCTGTGGCT
AATAAACCGGCTCCACGCCGCCGGCTACCAATGCCTACTGCTGGAATCCGCCAGCCTTGGTGGCGACCAGACCCTCGCGA
GCCAGGGGATTATCCACGGCGGCCTCAAGTATGCCTTAAGCGGCAACCTGTCCAACGAATCCGAAGCGATTGCCCAGATG
CCGGATCGCTGGCGTGCCGCCATGGCCGGCACCGACTCGGTAGACCTGCGCAACCTGAAAGTGCTCAGCGATACTCAACA
CATGTGGTCCAGCGGATCAGTGGCCTCACGGATGACTAACTTTTTCGCTAGCAAGATGCTCCGTGGCCGAATCGAAAAAC
TCAAGCGTGACCATTTCCCCAGCGCGCTGGCCAATAAGGCTTTCAAAGGCAACGTCTATAAACTCGACGACCTAGTGATC
GACACTGAATCATTGATCGACACCCTTAGCGCCCCGGTCCGAGACCGGCTACTGGCGTTCGATACCCAGCGCGATACTCT
AGAATGGAATAACGACGGCCTGCGCGCCGTCACCATTAATGGCCAGCGCATTGAGCCACGGCTGACCCTGCTGGCCGCCG
GCAACGGTAACCCAGCTCTGCTTGACGGCGCTCATCGCGCCCACCTTTTGGAACAGGAACACAGCCAGCTGCGGCCATTG
AAAATGGTGCTGGTAAAACACGACCAAGGCCATCGGCTTTACGCCCACTGTGTTGGCACCAGCAACAAACCCGTGCTCAC
TGTGACCACCCACGATTGTCCGGACGGCAAGGTGGTGTGGTACCTCGGCGGCGACTTGGCAGAGCGGGGGGTAGAGCGTA
CTGATGAAGAACAACTACATGCCGGTCGGGAAGAATTATCGCACCTTTTCCCTTGGCTAGATTTTAGCAACGCTCAATTC
GCCACCCTAGATGTGACCCGCGCCGAACCCAAACAACATGCGCTGGTCAAGCCGGATAACGCCTACGCCCGCCGGGATCA
AAACCTGATCATCGCCTGGCCCACTAAACTCACCCTGGCGCCGGATCTAGGCGACCGGGTAATGGCGCTGGTGGAAGAAA
CGGGCCTTCAACCCGGCGAGCCATTAACGATACCGCCAGCCCTTCAACGGGCGCCCATGGGCGTACCGTACTGGCATCGC
TGTTTTTAA

Upstream 100 bases:

>100_bases
GCCCAAAACACATGATCCATCTTGTCTGTGTCAGCGCCGATGCGCGTGCCAGCGGCCTTGCTTATGCTAGCATAGCCGCA
CAGTTCAACGATGGTGAGCC

Downstream 100 bases:

>100_bases
TGATTACTGTAGCAAGGCGTCGTTGGTGCTGCGCAAATGTCAGTTGAACGTTAAAGCGCAAAGGGAAAAAGGAGAAGGAT
GAATAATCTTTTCATCCCGA

Product: FAD-binding oxidoreductase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase Superfamily Protein; Glycerol-3-Phosphate Dehydrogenase; FAD Dependent Oxidoreductase Domain Protein

Number of amino acids: Translated: 402; Mature: 401

Protein sequence:

>402_residues
MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQM
PDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVI
DTESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL
KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQF
ATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHR
CF

Sequences:

>Translated_402_residues
MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQM
PDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVI
DTESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL
KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQF
ATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHR
CF
>Mature_401_residues
SDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQMP
DRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVID
TESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPLK
MVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQFA
TLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRC
F

Specific function: Unknown

COG id: COG0578

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44427; Mature: 44296

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHG
CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCEEC
GLKYALSGNLSNESEAIAQMPDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTN
CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHH
FFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVIDTESLIDTLSAPVRDRLLAF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCEEECHHHHHHHHCCCHHHHHEEE
DTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL
CCCCCCEEECCCCEEEEEECCCEECCEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCE
KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLH
EEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCHHHHH
AGREELSHLFPWLDFSNAQFATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLA
HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCCHHHHCCCCEEEECCCEEEEC
PDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRCF
CCCCHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCCHHHCC
>Mature Secondary Structure 
SDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHG
CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCEEC
GLKYALSGNLSNESEAIAQMPDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTN
CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHH
FFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVIDTESLIDTLSAPVRDRLLAF
HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCEEECHHHHHHHHCCCHHHHHEEE
DTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL
CCCCCCEEECCCCEEEEEECCCEECCEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCE
KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLH
EEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCHHHHH
AGREELSHLFPWLDFSNAQFATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLA
HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCCHHHHCCCCEEEECCCEEEEC
PDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRCF
CCCCHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA