| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835363
Identifier: 110835363
GI number: 110835363
Start: 2838296
End: 2839504
Strand: Direct
Name: 110835363
Synonym: ABO_2502
Alternate gene names: NA
Gene position: 2838296-2839504 (Clockwise)
Preceding gene: 110835361
Following gene: 110835364
Centisome position: 90.97
GC content: 58.4
Gene sequence:
>1209_bases ATGAGTGACTCGACCCTAAAACCCGACACAATCCACCCAGACATTGTGGTCTTTGGTGGCGGCATTGCCGGCCTGTGGCT AATAAACCGGCTCCACGCCGCCGGCTACCAATGCCTACTGCTGGAATCCGCCAGCCTTGGTGGCGACCAGACCCTCGCGA GCCAGGGGATTATCCACGGCGGCCTCAAGTATGCCTTAAGCGGCAACCTGTCCAACGAATCCGAAGCGATTGCCCAGATG CCGGATCGCTGGCGTGCCGCCATGGCCGGCACCGACTCGGTAGACCTGCGCAACCTGAAAGTGCTCAGCGATACTCAACA CATGTGGTCCAGCGGATCAGTGGCCTCACGGATGACTAACTTTTTCGCTAGCAAGATGCTCCGTGGCCGAATCGAAAAAC TCAAGCGTGACCATTTCCCCAGCGCGCTGGCCAATAAGGCTTTCAAAGGCAACGTCTATAAACTCGACGACCTAGTGATC GACACTGAATCATTGATCGACACCCTTAGCGCCCCGGTCCGAGACCGGCTACTGGCGTTCGATACCCAGCGCGATACTCT AGAATGGAATAACGACGGCCTGCGCGCCGTCACCATTAATGGCCAGCGCATTGAGCCACGGCTGACCCTGCTGGCCGCCG GCAACGGTAACCCAGCTCTGCTTGACGGCGCTCATCGCGCCCACCTTTTGGAACAGGAACACAGCCAGCTGCGGCCATTG AAAATGGTGCTGGTAAAACACGACCAAGGCCATCGGCTTTACGCCCACTGTGTTGGCACCAGCAACAAACCCGTGCTCAC TGTGACCACCCACGATTGTCCGGACGGCAAGGTGGTGTGGTACCTCGGCGGCGACTTGGCAGAGCGGGGGGTAGAGCGTA CTGATGAAGAACAACTACATGCCGGTCGGGAAGAATTATCGCACCTTTTCCCTTGGCTAGATTTTAGCAACGCTCAATTC GCCACCCTAGATGTGACCCGCGCCGAACCCAAACAACATGCGCTGGTCAAGCCGGATAACGCCTACGCCCGCCGGGATCA AAACCTGATCATCGCCTGGCCCACTAAACTCACCCTGGCGCCGGATCTAGGCGACCGGGTAATGGCGCTGGTGGAAGAAA CGGGCCTTCAACCCGGCGAGCCATTAACGATACCGCCAGCCCTTCAACGGGCGCCCATGGGCGTACCGTACTGGCATCGC TGTTTTTAA
Upstream 100 bases:
>100_bases GCCCAAAACACATGATCCATCTTGTCTGTGTCAGCGCCGATGCGCGTGCCAGCGGCCTTGCTTATGCTAGCATAGCCGCA CAGTTCAACGATGGTGAGCC
Downstream 100 bases:
>100_bases TGATTACTGTAGCAAGGCGTCGTTGGTGCTGCGCAAATGTCAGTTGAACGTTAAAGCGCAAAGGGAAAAAGGAGAAGGAT GAATAATCTTTTCATCCCGA
Product: FAD-binding oxidoreductase
Products: NA
Alternate protein names: FAD Dependent Oxidoreductase Superfamily Protein; Glycerol-3-Phosphate Dehydrogenase; FAD Dependent Oxidoreductase Domain Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQM PDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVI DTESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQF ATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHR CF
Sequences:
>Translated_402_residues MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQM PDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVI DTESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQF ATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHR CF >Mature_401_residues SDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHGGLKYALSGNLSNESEAIAQMP DRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTNFFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVID TESLIDTLSAPVRDRLLAFDTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPLK MVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLHAGREELSHLFPWLDFSNAQFA TLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLAPDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRC F
Specific function: Unknown
COG id: COG0578
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44427; Mature: 44296
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHG CCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCEEC GLKYALSGNLSNESEAIAQMPDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTN CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHH FFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVIDTESLIDTLSAPVRDRLLAF HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCEEECHHHHHHHHCCCHHHHHEEE DTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL CCCCCCEEECCCCEEEEEECCCEECCEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCE KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLH EEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCHHHHH AGREELSHLFPWLDFSNAQFATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLA HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCCHHHHCCCCEEEECCCEEEEC PDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRCF CCCCHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCCHHHCC >Mature Secondary Structure SDSTLKPDTIHPDIVVFGGGIAGLWLINRLHAAGYQCLLLESASLGGDQTLASQGIIHG CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHCCCEEC GLKYALSGNLSNESEAIAQMPDRWRAAMAGTDSVDLRNLKVLSDTQHMWSSGSVASRMTN CEEEEEECCCCCHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCHHHHCCCCCHHHHHHH FFASKMLRGRIEKLKRDHFPSALANKAFKGNVYKLDDLVIDTESLIDTLSAPVRDRLLAF HHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEECCEEECHHHHHHHHCCCHHHHHEEE DTQRDTLEWNNDGLRAVTINGQRIEPRLTLLAAGNGNPALLDGAHRAHLLEQEHSQLRPL CCCCCCEEECCCCEEEEEECCCEECCEEEEEEECCCCCEEECCHHHHHHHHHHHHHCCCE KMVLVKHDQGHRLYAHCVGTSNKPVLTVTTHDCPDGKVVWYLGGDLAERGVERTDEEQLH EEEEEECCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEECCHHHHCCCCCCCHHHHH AGREELSHLFPWLDFSNAQFATLDVTRAEPKQHALVKPDNAYARRDQNLIIAWPTKLTLA HHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCEECCCCHHHHCCCCEEEECCCEEEEC PDLGDRVMALVEETGLQPGEPLTIPPALQRAPMGVPYWHRCF CCCCHHHHHHHHHHCCCCCCCEECCHHHHHCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA