| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835341
Identifier: 110835341
GI number: 110835341
Start: 2811203
End: 2812102
Strand: Direct
Name: 110835341
Synonym: ABO_2480
Alternate gene names: NA
Gene position: 2811203-2812102 (Clockwise)
Preceding gene: 110835340
Following gene: 110835344
Centisome position: 90.1
GC content: 51.11
Gene sequence:
>900_bases ATGAACAACGCTGTTCGCCATCAAATTAAAGCTCGGCGGGTGCAATTCGATTTTGACGATACACCACTGCATTGGCTGCG CGATGACCCGTTCTCTACTCATATCATCAACGGTATTCACTTGTTACTACCGGAAGGTGAGCTGTGGTTCTGCCGAGTTT ATAACCAGGCGCTTCCTTTAATTAAAGACGATCAACTTCGAGCAGATGTAGAAGGCTTTATTCGTCAGGAAGCCGTGCAC TCGCGTGCCCACAGCAAAGCGCAGATGTATCTTGAGCGTCATGGCTTACGTGTGGCGCCCTTCCTGAATAAAGTGGAATG GTTGTTTGGAACGGCTTTGGCAGATGCGCCCTTCGGTTTAACACTGCTAAAGCGCAAGCCCCTGAAAAAAAACTGGCTGG TATTGCGTGTTGGCATCATCGCCGCCATCGAGCACTTCACTGGTGTGCTTGGCCAATGGGCCATGGATAACGAAAGCTGG GAACAAAACGGCGACGCCACCATGGTCGACCTATTCAAGTGGCACTTGGCCGAAGAAGTAGAGCACCGCACTGTTGCCTA CGACCTGTTTGAACATCTGTGCAAGACTCAACTAGGCTTTTACGTCAGCCGCCAGGCATTAATGGCACTGGTATTCCCCT TGTTCATTTATTTCATTGCGGAAGGCGGCAGGAGCCTGGCAGGTCAAGACCCAGATAAAGAAACCCGTAAGTTAGCTCGC AAGCTGCTTCCTCAGCTCCTCATTCAACTGCAGCAAGTCGGCCAGAAAACACAAAACGTGCCCACCTTTAGTTTCTTATT CAACGCCACCCTGCGTTGGGTATCGCCGCGGTTTCACCCAATCAATGAAGGCGATACTCAACAGGCCCTAGATTATCTGG CACGCTCTCCGGCAGCCTAG
Upstream 100 bases:
>100_bases TCCAAAAAACACGACGCAGGCTGGCCGGTACAATTGGTCGTGCCTACCCACGGTAATTATGTCGGTACACAGTTATACAC TCTCACGGAGACCGGACATC
Downstream 100 bases:
>100_bases GCAGCTGCCGTTTTGTAACGGGAGTATTAGTCTCCAGCTTCCAAGAGAGAGGCTGTCGCGCAATAGTAAAACGGCATGGC GAATTCCTTCACCATGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: FF Domain-Containing Protein; Metal-Dependent Hydrolase-Like Protein; Conserved Protein UCP; FF Domain Protein; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MNNAVRHQIKARRVQFDFDDTPLHWLRDDPFSTHIINGIHLLLPEGELWFCRVYNQALPLIKDDQLRADVEGFIRQEAVH SRAHSKAQMYLERHGLRVAPFLNKVEWLFGTALADAPFGLTLLKRKPLKKNWLVLRVGIIAAIEHFTGVLGQWAMDNESW EQNGDATMVDLFKWHLAEEVEHRTVAYDLFEHLCKTQLGFYVSRQALMALVFPLFIYFIAEGGRSLAGQDPDKETRKLAR KLLPQLLIQLQQVGQKTQNVPTFSFLFNATLRWVSPRFHPINEGDTQQALDYLARSPAA
Sequences:
>Translated_299_residues MNNAVRHQIKARRVQFDFDDTPLHWLRDDPFSTHIINGIHLLLPEGELWFCRVYNQALPLIKDDQLRADVEGFIRQEAVH SRAHSKAQMYLERHGLRVAPFLNKVEWLFGTALADAPFGLTLLKRKPLKKNWLVLRVGIIAAIEHFTGVLGQWAMDNESW EQNGDATMVDLFKWHLAEEVEHRTVAYDLFEHLCKTQLGFYVSRQALMALVFPLFIYFIAEGGRSLAGQDPDKETRKLAR KLLPQLLIQLQQVGQKTQNVPTFSFLFNATLRWVSPRFHPINEGDTQQALDYLARSPAA >Mature_299_residues MNNAVRHQIKARRVQFDFDDTPLHWLRDDPFSTHIINGIHLLLPEGELWFCRVYNQALPLIKDDQLRADVEGFIRQEAVH SRAHSKAQMYLERHGLRVAPFLNKVEWLFGTALADAPFGLTLLKRKPLKKNWLVLRVGIIAAIEHFTGVLGQWAMDNESW EQNGDATMVDLFKWHLAEEVEHRTVAYDLFEHLCKTQLGFYVSRQALMALVFPLFIYFIAEGGRSLAGQDPDKETRKLAR KLLPQLLIQLQQVGQKTQNVPTFSFLFNATLRWVSPRFHPINEGDTQQALDYLARSPAA
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34493; Mature: 34493
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNAVRHQIKARRVQFDFDDTPLHWLRDDPFSTHIINGIHLLLPEGELWFCRVYNQALPL CCCHHHHHHHHHHEEECCCCCCCHHHCCCCCHHHHHCCEEEEECCCCEEEEEEHHHHCCC IKDDQLRADVEGFIRQEAVHSRAHSKAQMYLERHGLRVAPFLNKVEWLFGTALADAPFGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCH TLLKRKPLKKNWLVLRVGIIAAIEHFTGVLGQWAMDNESWEQNGDATMVDLFKWHLAEEV HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHH EHRTVAYDLFEHLCKTQLGFYVSRQALMALVFPLFIYFIAEGGRSLAGQDPDKETRKLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KLLPQLLIQLQQVGQKTQNVPTFSFLFNATLRWVSPRFHPINEGDTQQALDYLARSPAA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MNNAVRHQIKARRVQFDFDDTPLHWLRDDPFSTHIINGIHLLLPEGELWFCRVYNQALPL CCCHHHHHHHHHHEEECCCCCCCHHHCCCCCHHHHHCCEEEEECCCCEEEEEEHHHHCCC IKDDQLRADVEGFIRQEAVHSRAHSKAQMYLERHGLRVAPFLNKVEWLFGTALADAPFGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCCCH TLLKRKPLKKNWLVLRVGIIAAIEHFTGVLGQWAMDNESWEQNGDATMVDLFKWHLAEEV HHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHHHHH EHRTVAYDLFEHLCKTQLGFYVSRQALMALVFPLFIYFIAEGGRSLAGQDPDKETRKLAR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH KLLPQLLIQLQQVGQKTQNVPTFSFLFNATLRWVSPRFHPINEGDTQQALDYLARSPAA HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA