| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835340
Identifier: 110835340
GI number: 110835340
Start: 2810409
End: 2810774
Strand: Direct
Name: 110835340
Synonym: ABO_2479
Alternate gene names: NA
Gene position: 2810409-2810774 (Clockwise)
Preceding gene: 110835338
Following gene: 110835341
Centisome position: 90.07
GC content: 50.82
Gene sequence:
>366_bases ATGAAGAAATTGATTCTTGCATCAATACTATTGGGTGCTACCGCCACCGTTACCGCTGGCGAGACCATTACCACTGACAG CGCAGCGATCACTCAGGGCATCAAGGAAGGTACTGAGGTGCGCATGGAAGGTGAAGTAGTTCAGGCACTCGGTGATGAGC GTTATTTGCTGCGCGACATCAAAGGCCAAGTCGAGATCGAGTTAGATGAAGATCTCACTGCAGAACGTCCGCTGAAAGCC GGCACCCGACTTTCCTTTACCGGCGAAGTGGACCATGACGATGGCCGTAGCATCGTAAAGATAAACAAGGTTCATTCTGT AAAAGGTGCGCCTGACAGCGCCCCAAACGCAACGATCAGTAATTAA
Upstream 100 bases:
>100_bases CCACCCATAGCATGCTTTAACTGAACTTTTACAAACACCGGGAACGATCCCCCCTTATCCGCCACTAACTTAGTGAGACA TCTACCAAGGAGGATGATTC
Downstream 100 bases:
>100_bases TCCCTGATCCACTGCTCCAACCTTACTAACGGCGGCCTACGGGTCGCCGTTTCTATTTTCTCACCCCTTCATTTCGCACC AGCCCACCTTCCAGCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MKKLILASILLGATATVTAGETITTDSAAITQGIKEGTEVRMEGEVVQALGDERYLLRDIKGQVEIELDEDLTAERPLKA GTRLSFTGEVDHDDGRSIVKINKVHSVKGAPDSAPNATISN
Sequences:
>Translated_121_residues MKKLILASILLGATATVTAGETITTDSAAITQGIKEGTEVRMEGEVVQALGDERYLLRDIKGQVEIELDEDLTAERPLKA GTRLSFTGEVDHDDGRSIVKINKVHSVKGAPDSAPNATISN >Mature_121_residues MKKLILASILLGATATVTAGETITTDSAAITQGIKEGTEVRMEGEVVQALGDERYLLRDIKGQVEIELDEDLTAERPLKA GTRLSFTGEVDHDDGRSIVKINKVHSVKGAPDSAPNATISN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12874; Mature: 12874
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLILASILLGATATVTAGETITTDSAAITQGIKEGTEVRMEGEVVQALGDERYLLRDI CCHHHHHHHHHCCCEEEECCCEEECCHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEECC KGQVEIELDEDLTAERPLKAGTRLSFTGEVDHDDGRSIVKINKVHSVKGAPDSAPNATIS CCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECEEECCCCCCCCCCCCCC N C >Mature Secondary Structure MKKLILASILLGATATVTAGETITTDSAAITQGIKEGTEVRMEGEVVQALGDERYLLRDI CCHHHHHHHHHCCCEEEECCCEEECCHHHHHHHHCCCCEEEECCHHHHHCCCCCEEEECC KGQVEIELDEDLTAERPLKAGTRLSFTGEVDHDDGRSIVKINKVHSVKGAPDSAPNATIS CCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEECEEECCCCCCCCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA