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The map label for this gene is rcnR [H]

Identifier: 110835330

GI number: 110835330

Start: 2797816

End: 2798085

Strand: Direct

Name: rcnR [H]

Synonym: ABO_2469

Alternate gene names: 110835330

Gene position: 2797816-2798085 (Clockwise)

Preceding gene: 110835328

Following gene: 110835331

Centisome position: 89.67

GC content: 58.52

Gene sequence:

>270_bases
ATGCACACGATCAAAGACAAAGCGAAGCTATTAACCCGCGTTCGGCGCATTCAGGGGCAGACGGCCGCACTGGAAAGGCA
GCTTGACGAGGAGGGCGACTGCACGGCCGTGCTGCAACAGATCGCCGCGATTCGTGGGGCGGTGAATGGACTGATGGCAG
CCATCATTGAGGGGCACTTGACTGATCACGTCGTCAGGGAACCCGAGTTGGAGCAGCGGCAACAAGACTTGGAAGCGGTG
CTGCAGGTCATCAAGTCCTACCTCAAGTAG

Upstream 100 bases:

>100_bases
GCTTCACCTACCTCTCCTCTCTTGCAAACAAGCATACTACCCCCTAGTATTTATATACTACCCTCCAGTATAGTTTTTGG
GCCACTAAAGAGACGACTGC

Downstream 100 bases:

>100_bases
AACATCACGAGCTACAGCGTGGGTACCCTAGCTGTAAGAGGCGAACTTTGGCAGTGATTTAATATCCGCGCCCCTGAAGT
TCTTGCGGAACCGGAGCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 89

Protein sequence:

>89_residues
MHTIKDKAKLLTRVRRIQGQTAALERQLDEEGDCTAVLQQIAAIRGAVNGLMAAIIEGHLTDHVVREPELEQRQQDLEAV
LQVIKSYLK

Sequences:

>Translated_89_residues
MHTIKDKAKLLTRVRRIQGQTAALERQLDEEGDCTAVLQQIAAIRGAVNGLMAAIIEGHLTDHVVREPELEQRQQDLEAV
LQVIKSYLK
>Mature_89_residues
MHTIKDKAKLLTRVRRIQGQTAALERQLDEEGDCTAVLQQIAAIRGAVNGLMAAIIEGHLTDHVVREPELEQRQQDLEAV
LQVIKSYLK

Specific function: Repressor of rcnA expression. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter [H]

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the frmR/rcnR family [H]

Homologues:

Organism=Escherichia coli, GI1788422, Length=88, Percent_Identity=57.9545454545455, Blast_Score=106, Evalue=3e-25,
Organism=Escherichia coli, GI87081725, Length=88, Percent_Identity=45.4545454545455, Blast_Score=81, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 9985; Mature: 9985

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTIKDKAKLLTRVRRIQGQTAALERQLDEEGDCTAVLQQIAAIRGAVNGLMAAIIEGHL
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDHVVREPELEQRQQDLEAVLQVIKSYLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MHTIKDKAKLLTRVRRIQGQTAALERQLDEEGDCTAVLQQIAAIRGAVNGLMAAIIEGHL
CCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TDHVVREPELEQRQQDLEAVLQVIKSYLK
HHHHHCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA