| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is waaP1 [C]
Identifier: 110835160
GI number: 110835160
Start: 2621427
End: 2622215
Strand: Reverse
Name: waaP1 [C]
Synonym: ABO_2299
Alternate gene names: 110835160
Gene position: 2622215-2621427 (Counterclockwise)
Preceding gene: 110835161
Following gene: 110835159
Centisome position: 84.04
GC content: 51.71
Gene sequence:
>789_bases ATGAGTAATCCAATGGAATTGAATGGCAATTACATTCACCCCCACTGGCGATTGACGTTGAATGGGCTTGGTCTGAACAC GATTGCGGATTGGTTGGCGTTAGACAAGACGCTGGTCGACGAGCCCAACCAGCGAGGGCGTGGGATCAGCCAAGTATTCC AGGCAAACGTGGTTGGGGCTGGAGGGGAACCGGTAACCGTTTATATCAAGCATCAGCGTAACTATGTGCGACGTACTGTG CTGCACCCCATCACCGGGCAAGCCACTTTGTATCAGGAATACATAGCCCTGATGCGTTGCTGGCAAGCGGGTGTGCCGGT AGCGGAGCCATTGTTTTTTGCTGTGAACTCGCAAGGTGGAAATCATGAAGCCATGTTGGTCAGCATTAACTTGGCTGGCT TTCAGAGCCTTGATCAAATCGATTTGGGTGCGTTATCCCCTGGGAGACGATTTACGTTAATACGTGATGTGGCCTCAGTG GTGCGCTTGCTTCATGAGCGTGGTTTGGTTCACCAGAATTTGTATCCCAAGCATATTTTTGTTGCTTGGTGTGAAAAACA GCAACGCTATGATGTGCGTTTCATTGATATGGAACGCTGTCGGCCTCACTACCAGCGCTGGCAGCCCCGTCTACGTGATC TGGAGACGTTGGCAAGACGAGCGAAAGGTTTTTCTGCCCGTGACAGGGTGCGGTTTTTAAGAGCGTATCTTGACCGACCG CTGGCAGATAGCGATGGGAGATCACTCGTTGCCCGCATGGAGCGTAAGTTCAAGTTAAGGAGCGCCTGA
Upstream 100 bases:
>100_bases AGCCCCTGTTTCGAGCGTGAATGCCCGCTGGGCCACCTGAATTGTTTGCGTCAGTTGCCGCCCATGAAGGTGATTGACTC GTTGGGGATATTGGTAGGAG
Downstream 100 bases:
>100_bases TCAATGCGTTTGCTTTTGATCAAGACCTCTTCCATGGGCGATGTGATTCATGCCTTGCCTGCATTGACTGATGCGCTAGT GGCCTTTCCCTCGTTAAAGG
Product: lipopolysaacharide kinase
Products: NA
Alternate protein names: InaA Protein; Lipopolysaccharide Kinase Family; Lipopolysaccharide Biosynthesis Protein; Lipopolysaacharide Kinase; Serine/Threonine Protein Kinase; Lipopolysaccharide Core Biosynthesis Protein; Lipopolysaccharide Kinase Family Protein; Heptose Kinase WapQ; Lipopolysaccharide Biosynthesis-Like Protein
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSNPMELNGNYIHPHWRLTLNGLGLNTIADWLALDKTLVDEPNQRGRGISQVFQANVVGAGGEPVTVYIKHQRNYVRRTV LHPITGQATLYQEYIALMRCWQAGVPVAEPLFFAVNSQGGNHEAMLVSINLAGFQSLDQIDLGALSPGRRFTLIRDVASV VRLLHERGLVHQNLYPKHIFVAWCEKQQRYDVRFIDMERCRPHYQRWQPRLRDLETLARRAKGFSARDRVRFLRAYLDRP LADSDGRSLVARMERKFKLRSA
Sequences:
>Translated_262_residues MSNPMELNGNYIHPHWRLTLNGLGLNTIADWLALDKTLVDEPNQRGRGISQVFQANVVGAGGEPVTVYIKHQRNYVRRTV LHPITGQATLYQEYIALMRCWQAGVPVAEPLFFAVNSQGGNHEAMLVSINLAGFQSLDQIDLGALSPGRRFTLIRDVASV VRLLHERGLVHQNLYPKHIFVAWCEKQQRYDVRFIDMERCRPHYQRWQPRLRDLETLARRAKGFSARDRVRFLRAYLDRP LADSDGRSLVARMERKFKLRSA >Mature_261_residues SNPMELNGNYIHPHWRLTLNGLGLNTIADWLALDKTLVDEPNQRGRGISQVFQANVVGAGGEPVTVYIKHQRNYVRRTVL HPITGQATLYQEYIALMRCWQAGVPVAEPLFFAVNSQGGNHEAMLVSINLAGFQSLDQIDLGALSPGRRFTLIRDVASVV RLLHERGLVHQNLYPKHIFVAWCEKQQRYDVRFIDMERCRPHYQRWQPRLRDLETLARRAKGFSARDRVRFLRAYLDRPL ADSDGRSLVARMERKFKLRSA
Specific function: May Be An Environmental Sensor Responsive To Several Stimuli, Including Internal Ph, Proton Motive Force, Temperature, And Possibly Other Unknown Factors. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30186; Mature: 30055
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPMELNGNYIHPHWRLTLNGLGLNTIADWLALDKTLVDEPNQRGRGISQVFQANVVGA CCCCCCCCCCEECCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECC GGEPVTVYIKHQRNYVRRTVLHPITGQATLYQEYIALMRCWQAGVPVAEPLFFAVNSQGG CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC NHEAMLVSINLAGFQSLDQIDLGALSPGRRFTLIRDVASVVRLLHERGLVHQNLYPKHIF CCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHE VAWCEKQQRYDVRFIDMERCRPHYQRWQPRLRDLETLARRAKGFSARDRVRFLRAYLDRP EEECCCCCCCCEEEEEHHHCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC LADSDGRSLVARMERKFKLRSA CCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNPMELNGNYIHPHWRLTLNGLGLNTIADWLALDKTLVDEPNQRGRGISQVFQANVVGA CCCCCCCCCEECCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHEECC GGEPVTVYIKHQRNYVRRTVLHPITGQATLYQEYIALMRCWQAGVPVAEPLFFAVNSQGG CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC NHEAMLVSINLAGFQSLDQIDLGALSPGRRFTLIRDVASVVRLLHERGLVHQNLYPKHIF CCEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHE VAWCEKQQRYDVRFIDMERCRPHYQRWQPRLRDLETLARRAKGFSARDRVRFLRAYLDRP EEECCCCCCCCEEEEEHHHCCHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC LADSDGRSLVARMERKFKLRSA CCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA