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The map label for this gene is waaF [H]

Identifier: 110835161

GI number: 110835161

Start: 2622208

End: 2623263

Strand: Reverse

Name: waaF [H]

Synonym: ABO_2300

Alternate gene names: 110835161

Gene position: 2623263-2622208 (Counterclockwise)

Preceding gene: 110835162

Following gene: 110835160

Centisome position: 84.08

GC content: 60.98

Gene sequence:

>1056_bases
ATGCCGGCTACCTTGACCGACTCGCCCTCCGCCATCCTTGTCGTCGGCCCGTCCTGGGTCGGCGACATGGTGATGGCGCA
AACGCTGTTTTCCGAACTGCGTCATCAATACCCCGATTGTGCTATCGATGTGCTGGCGCCGACCTGGTGTCGGCCGCTGC
TGTCACGCATGCCGGAAGTGCGTGAGGCGCTGGCGTTGCCGTTTGATCATGGCGATTTGCGTCTTGGTGAGCGGCACGCA
TTGGGGAAATCCCTGCGCGGCCACTATCAGCAAAGTTATGTGCTGCCCAATTCGCTCAAGTCTGCGCTGGTACCGTTTTC
GGCGAAAGTTCCGGTGCGCACCGGCTGGCGCGGCGAAATGCGTTATGGCCTGCTCAACGATGTGCGCAAGCTGGACAAGG
AGCGCTACCCCTTGATGGTGCAGCGTTTTGTGGCGCTGGCATTGCCGGAAGGTGCGCCGGTTCCGGGGCTGGATGAGATT
ACCGCTCCACACTTGCAGGTCAGCGACGATTCCCGCAATGGGGCCATGGCGGCGCATAATCTCAACCTGGACCGCCCGGT
GCTGGGGCTGTGCCCTGGTGCGGAGTTCGGCCCGGCCAAACGCTGGCCGGAGCATCATTATGCCGCAGTGGCCCAGCACT
GGATTGAGCGTGGCGGGCAGGTGTGGATCTTCGGTTCCGGGAAAGACCAGCCCGTGGCGGATGTGATCGTCGGGGCACTG
GAGAACGGTGCGGATGAGCATGCGGTGGTGCTGGCGGGGAATACGTCCCTGGAGCAGGCCGTGGATTTGCTGTCAGCGAC
CATGGCGGTGGTCAGCAATGATTCTGGCTTGATGCATATTGCGGCTGCACTGAAGCGGCCATTGGTAGCCGTATACGGTT
CTACATCTCCCGGTTTTACGCCGCCCTTGGGGGATCGGGTAGCAGTGGTACGATTGGGGTTGGAGTGTAGCCCCTGTTTC
GAGCGTGAATGCCCGCTGGGCCACCTGAATTGTTTGCGTCAGTTGCCGCCCATGAAGGTGATTGACTCGTTGGGGATATT
GGTAGGAGATGAGTAA

Upstream 100 bases:

>100_bases
CGGTGACTGAACAGCTGCAGGCGGTGTATTTCGATCTGGTGCGCGGCAAACTGGATGACGACTACGGAGACTGGCTCACT
TACGTGAGCTAAACAGGCGG

Downstream 100 bases:

>100_bases
TCCAATGGAATTGAATGGCAATTACATTCACCCCCACTGGCGATTGACGTTGAATGGGCTTGGTCTGAACACGATTGCGG
ATTGGTTGGCGTTAGACAAG

Product: ADP-heptose LPS heptosyltransferase II

Products: NA

Alternate protein names: ADP-heptose--LPS heptosyltransferase II [H]

Number of amino acids: Translated: 351; Mature: 350

Protein sequence:

>351_residues
MPATLTDSPSAILVVGPSWVGDMVMAQTLFSELRHQYPDCAIDVLAPTWCRPLLSRMPEVREALALPFDHGDLRLGERHA
LGKSLRGHYQQSYVLPNSLKSALVPFSAKVPVRTGWRGEMRYGLLNDVRKLDKERYPLMVQRFVALALPEGAPVPGLDEI
TAPHLQVSDDSRNGAMAAHNLNLDRPVLGLCPGAEFGPAKRWPEHHYAAVAQHWIERGGQVWIFGSGKDQPVADVIVGAL
ENGADEHAVVLAGNTSLEQAVDLLSATMAVVSNDSGLMHIAAALKRPLVAVYGSTSPGFTPPLGDRVAVVRLGLECSPCF
ERECPLGHLNCLRQLPPMKVIDSLGILVGDE

Sequences:

>Translated_351_residues
MPATLTDSPSAILVVGPSWVGDMVMAQTLFSELRHQYPDCAIDVLAPTWCRPLLSRMPEVREALALPFDHGDLRLGERHA
LGKSLRGHYQQSYVLPNSLKSALVPFSAKVPVRTGWRGEMRYGLLNDVRKLDKERYPLMVQRFVALALPEGAPVPGLDEI
TAPHLQVSDDSRNGAMAAHNLNLDRPVLGLCPGAEFGPAKRWPEHHYAAVAQHWIERGGQVWIFGSGKDQPVADVIVGAL
ENGADEHAVVLAGNTSLEQAVDLLSATMAVVSNDSGLMHIAAALKRPLVAVYGSTSPGFTPPLGDRVAVVRLGLECSPCF
ERECPLGHLNCLRQLPPMKVIDSLGILVGDE
>Mature_350_residues
PATLTDSPSAILVVGPSWVGDMVMAQTLFSELRHQYPDCAIDVLAPTWCRPLLSRMPEVREALALPFDHGDLRLGERHAL
GKSLRGHYQQSYVLPNSLKSALVPFSAKVPVRTGWRGEMRYGLLNDVRKLDKERYPLMVQRFVALALPEGAPVPGLDEIT
APHLQVSDDSRNGAMAAHNLNLDRPVLGLCPGAEFGPAKRWPEHHYAAVAQHWIERGGQVWIFGSGKDQPVADVIVGALE
NGADEHAVVLAGNTSLEQAVDLLSATMAVVSNDSGLMHIAAALKRPLVAVYGSTSPGFTPPLGDRVAVVRLGLECSPCFE
RECPLGHLNCLRQLPPMKVIDSLGILVGDE

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790050, Length=344, Percent_Identity=52.3255813953488, Blast_Score=353, Evalue=7e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011910 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 38024; Mature: 37893

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATLTDSPSAILVVGPSWVGDMVMAQTLFSELRHQYPDCAIDVLAPTWCRPLLSRMPEV
CCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHCHHHHHHHHHHCHHH
REALALPFDHGDLRLGERHALGKSLRGHYQQSYVLPNSLKSALVPFSAKVPVRTGWRGEM
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
RYGLLNDVRKLDKERYPLMVQRFVALALPEGAPVPGLDEITAPHLQVSDDSRNGAMAAHN
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEECCCCCCCCEEEEC
LNLDRPVLGLCPGAEFGPAKRWPEHHYAAVAQHWIERGGQVWIFGSGKDQPVADVIVGAL
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH
ENGADEHAVVLAGNTSLEQAVDLLSATMAVVSNDSGLMHIAAALKRPLVAVYGSTSPGFT
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCC
PPLGDRVAVVRLGLECSPCFERECPLGHLNCLRQLPPMKVIDSLGILVGDE
CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCEECCC
>Mature Secondary Structure 
PATLTDSPSAILVVGPSWVGDMVMAQTLFSELRHQYPDCAIDVLAPTWCRPLLSRMPEV
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCEEHHHCHHHHHHHHHHCHHH
REALALPFDHGDLRLGERHALGKSLRGHYQQSYVLPNSLKSALVPFSAKVPVRTGWRGEM
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCHH
RYGLLNDVRKLDKERYPLMVQRFVALALPEGAPVPGLDEITAPHLQVSDDSRNGAMAAHN
HHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEECCCCCCCCEEEEC
LNLDRPVLGLCPGAEFGPAKRWPEHHYAAVAQHWIERGGQVWIFGSGKDQPVADVIVGAL
CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH
ENGADEHAVVLAGNTSLEQAVDLLSATMAVVSNDSGLMHIAAALKRPLVAVYGSTSPGFT
HCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCCCC
PPLGDRVAVVRLGLECSPCFERECPLGHLNCLRQLPPMKVIDSLGILVGDE
CCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 2198271; 8478319 [H]