Click here to switch to the map view.

The map label for this gene is trmU

Identifier: 110835125

GI number: 110835125

Start: 2583471

End: 2584556

Strand: Reverse

Name: trmU

Synonym: ABO_2264

Alternate gene names: NA

Gene position: 2584556-2583471 (Counterclockwise)

Preceding gene: 110835126

Following gene: 110835124

Centisome position: 82.83

GC content: 55.43

Gene sequence:

>1086_bases
ATGACAGAGGCAAGCCAACCAATCAAGCGTCGCGCCATTGCACTGGTGTCCGGTGGACTGGACTCCATGCTGGCAGTGAA
AGTCATGCAGGACCAGGGCATCGAGGTAGAGGGCGTGAATTTCTACACTGGTTTCTGTGTGGAGGGGCATACCCATGCTA
TTCGCAAGAAAGACAAGGATAAGGAAAAGCGTAATAACGCCTTGTGGGTTGCGGAGCAGCTGGGCATTAAAATGCATATC
ATTGATATCTCCGAGGAGTACAAGGATGTGGTGCTCAACCCCAAGCATGGTTACGGCGCAAACCTGAATCCCTGTCTCGA
CTGTAAGATTTTCATGGTTAATCAGGCCACTCTGATGATTAACAAGGCCCGGGAGTTGGCCGGTGATCGGGGCTTTGATT
TTATCGTTACTGGTGAAGTGATTGGTCAGCGCCCGAAGAGTCAGCGCAAGGAAACGATGCCGATCATTAGCCAGGAGTCC
GGTGCTGACGACCGTCTTTTACGCCCTCTGTGCGCAAAAAACTTGCCCCCTACGCTGCCTGAGCGCGAAGGTTGGGTAAA
CCGGGAGCAGTTGCACGATTTTTCCGGCCGTAACCGGAAACCGCAAATGGCGCTGGCCGCCAAGTTTGGGTTGGACGATT
TTGCTCAGCCTGCCGGTGGCTGTTGCTTCCTCACCGATGAGTCTTATTCCAACAAGCTGGCGGACCTGTGGAAGGCTCGC
AATGAGCGTCGATACGAACTGGATGACATCATGCTGCTGAAGGTTGGGCGTCATCTGCGTCCGCAGCCGCATTACAAACT
GATTATCAGCCGTGAAGAAGGTGAAAACCGTTTTCTGGAAGGTTATCGTTACCAGTTCACCAGTATTACCACGGTGAGTT
GCCCGGGCCCGCTGGCGCTGGTGGACGGTGAGTTTGGTAGCGAGGCAGAGCTGGAGCAGGCGGCGGCCATTGTGGCACGT
TACTCCAAGGGGCGTGTTGAAGACGCGGTGACTCTGGAAGTGCGCAGCCCGGACGGTGTTGCACGCGAGATTACCGTGGC
GCCGGCGCAAGCGGAAGCGGTGCTGCCAAGCTGGAATGTGGGCTGA

Upstream 100 bases:

>100_bases
GGTTGAGGCGGGGCGATTGGGAGGATGCGCCTTAGGCCGACCATTGCTATACTGCGCCGCCCAAATTTTGAGCTGTCCCC
ACAGCAACGCAGGTTTTTCG

Downstream 100 bases:

>100_bases
ACGACGATGACCGATACCCTTCACGAATTGGATGTGCGCAGGCTGCTGTGCCCCATGCCGGTGATAAAAACTCAAAATAA
AGTAAGAACTCTGGCGACAG

Product: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase

Products: NA

Alternate protein names: TRNA-Methyltransferase; Thiamine Biosynthesis ProteinExsB; tRNA Methyltransferase; Argininosuccinate Synthase; Queuosine Synthesis; tRNA -Methyltransferase; tRNA Methyl Transferase; Thiamine Biosynthesis Protein-Like Protein; tRNA Methyl Transferase-Like Protein; ThiI Family Protein; Arginino Succinate Synthase; TRNA(5-Methylaminomethyl-2-Thiouridylate) Methyltransferase

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MTEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKDKEKRNNALWVAEQLGIKMHI
IDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMINKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQES
GADDRLLRPLCAKNLPPTLPEREGWVNREQLHDFSGRNRKPQMALAAKFGLDDFAQPAGGCCFLTDESYSNKLADLWKAR
NERRYELDDIMLLKVGRHLRPQPHYKLIISREEGENRFLEGYRYQFTSITTVSCPGPLALVDGEFGSEAELEQAAAIVAR
YSKGRVEDAVTLEVRSPDGVAREITVAPAQAEAVLPSWNVG

Sequences:

>Translated_361_residues
MTEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKDKEKRNNALWVAEQLGIKMHI
IDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMINKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQES
GADDRLLRPLCAKNLPPTLPEREGWVNREQLHDFSGRNRKPQMALAAKFGLDDFAQPAGGCCFLTDESYSNKLADLWKAR
NERRYELDDIMLLKVGRHLRPQPHYKLIISREEGENRFLEGYRYQFTSITTVSCPGPLALVDGEFGSEAELEQAAAIVAR
YSKGRVEDAVTLEVRSPDGVAREITVAPAQAEAVLPSWNVG
>Mature_360_residues
TEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKDKEKRNNALWVAEQLGIKMHII
DISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMINKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQESG
ADDRLLRPLCAKNLPPTLPEREGWVNREQLHDFSGRNRKPQMALAAKFGLDDFAQPAGGCCFLTDESYSNKLADLWKARN
ERRYELDDIMLLKVGRHLRPQPHYKLIISREEGENRFLEGYRYQFTSITTVSCPGPLALVDGEFGSEAELEQAAAIVARY
SKGRVEDAVTLEVRSPDGVAREITVAPAQAEAVLPSWNVG

Specific function: Unknown

COG id: COG0482

COG function: function code J; Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40344; Mature: 40212

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKD
CCCCCHHHHHHHHHHCCCCHHHHHEEEEHHCCCCEEECEEEEEEEEECCCHHHHHCCCHH
KEKRNNALWVAEQLGIKMHIIDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMI
HHHHCCEEEEEHHCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEEEEEEECEEEEE
NKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQESGADDRLLRPLCAKNLPPTLP
HHHHHHCCCCCCEEEEECHHHCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCC
EREGWVNREQLHDFSGRNRKPQMALAAKFGLDDFAQPAGGCCFLTDESYSNKLADLWKAR
CCCCCCCHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHC
NERRYELDDIMLLKVGRHLRPQPHYKLIISREEGENRFLEGYRYQFTSITTVSCPGPLAL
CCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCEEEEEEEEEEEECCCCEEE
VDGEFGSEAELEQAAAIVARYSKGRVEDAVTLEVRSPDGVAREITVAPAQAEAVLPSWNV
EECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCCC
G
C
>Mature Secondary Structure 
TEASQPIKRRAIALVSGGLDSMLAVKVMQDQGIEVEGVNFYTGFCVEGHTHAIRKKDKD
CCCCHHHHHHHHHHCCCCHHHHHEEEEHHCCCCEEECEEEEEEEEECCCHHHHHCCCHH
KEKRNNALWVAEQLGIKMHIIDISEEYKDVVLNPKHGYGANLNPCLDCKIFMVNQATLMI
HHHHCCEEEEEHHCCCEEEEEECCCCCHHEEECCCCCCCCCCCCCCCEEEEEEECEEEEE
NKARELAGDRGFDFIVTGEVIGQRPKSQRKETMPIISQESGADDRLLRPLCAKNLPPTLP
HHHHHHCCCCCCEEEEECHHHCCCCHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCC
EREGWVNREQLHDFSGRNRKPQMALAAKFGLDDFAQPAGGCCFLTDESYSNKLADLWKAR
CCCCCCCHHHHHHCCCCCCCCCEEEEECCCCHHHCCCCCCEEEEECCHHHHHHHHHHHHC
NERRYELDDIMLLKVGRHLRPQPHYKLIISREEGENRFLEGYRYQFTSITTVSCPGPLAL
CCCCCCHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCHHCCEEEEEEEEEEEECCCCEEE
VDGEFGSEAELEQAAAIVARYSKGRVEDAVTLEVRSPDGVAREITVAPAQAEAVLPSWNV
EECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEECCCCCCEECCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA