| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is yhhP [C]
Identifier: 110835124
GI number: 110835124
Start: 2583213
End: 2583464
Strand: Reverse
Name: yhhP [C]
Synonym: ABO_2263
Alternate gene names: 110835124
Gene position: 2583464-2583213 (Counterclockwise)
Preceding gene: 110835125
Following gene: 110835123
Centisome position: 82.8
GC content: 50.79
Gene sequence:
>252_bases ATGACCGATACCCTTCACGAATTGGATGTGCGCAGGCTGCTGTGCCCCATGCCGGTGATAAAAACTCAAAATAAAGTAAG AACTCTGGCGACAGGTGATACCCTGAAAGTCGTTTGCACCGACCCTGGAGCATTAAGCGATATCCCCGCCTGGTGTCGGA TTAATGGCCATGAGGTGCTGGAAATGGCGGAGCAAGGCAACGAAGTTTTTGTGGTGTTGCGCGTCGGGCAAGATAATGGT GCACTATTTTAG
Upstream 100 bases:
>100_bases TCTGGAAGTGCGCAGCCCGGACGGTGTTGCACGCGAGATTACCGTGGCGCCGGCGCAAGCGGAAGCGGTGCTGCCAAGCT GGAATGTGGGCTGAACGACG
Downstream 100 bases:
>100_bases TGCCCTATATGCGTTTGGTGCACTGCATCTGTGCACCAAAATGAGTCGCCTGTTCTTGTTTCTTCGAATCAAGTAGAGAA TGCGCTAAAAAAGGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Protein Family UPF; SirA-Like Protein
Number of amino acids: Translated: 83; Mature: 82
Protein sequence:
>83_residues MTDTLHELDVRRLLCPMPVIKTQNKVRTLATGDTLKVVCTDPGALSDIPAWCRINGHEVLEMAEQGNEVFVVLRVGQDNG ALF
Sequences:
>Translated_83_residues MTDTLHELDVRRLLCPMPVIKTQNKVRTLATGDTLKVVCTDPGALSDIPAWCRINGHEVLEMAEQGNEVFVVLRVGQDNG ALF >Mature_82_residues TDTLHELDVRRLLCPMPVIKTQNKVRTLATGDTLKVVCTDPGALSDIPAWCRINGHEVLEMAEQGNEVFVVLRVGQDNGA LF
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9162; Mature: 9031
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTLHELDVRRLLCPMPVIKTQNKVRTLATGDTLKVVCTDPGALSDIPAWCRINGHEVL CCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEECHHHHH EMAEQGNEVFVVLRVGQDNGALF HHHHCCCEEEEEEEECCCCCCCC >Mature Secondary Structure TDTLHELDVRRLLCPMPVIKTQNKVRTLATGDTLKVVCTDPGALSDIPAWCRINGHEVL CCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCEEEECHHHHH EMAEQGNEVFVVLRVGQDNGALF HHHHCCCEEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA