| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835116
Identifier: 110835116
GI number: 110835116
Start: 2575428
End: 2575910
Strand: Reverse
Name: 110835116
Synonym: ABO_2255
Alternate gene names: NA
Gene position: 2575910-2575428 (Counterclockwise)
Preceding gene: 110835117
Following gene: 110835115
Centisome position: 82.56
GC content: 52.59
Gene sequence:
>483_bases ATGAAAAAAACACTTATCGCTGCTGCGCTGCTGGGCGCTTCAACATCTGCCATGGCTGTTGCACCGGGTGGTCCGGGCTG TGGTTGGGGCAACATGCTGTTTGAAGGCAAATCCGGCATGCCAGTACACTTTCTCGCTACTACTGTGAATGGTACATCGG GTAATGCTACCTTCGGCATGACTTCTGGTACTAACGGTTGTGATACCAATGGCTCTCTGACCTATAGTGGCCAGAGCCTG CTGGGTATGACTGGCGTGATGGAAGAAGTGGCTCAGGACATGGCTACCGGTGAAGGCGAAGCCCTGACCGCGCTGTCTGT TTCTATGGGTATTCAGACTGAAGATCGTGCACGTTTTAATGCGTTGATGCATGACAACTTCGCGGCAATTTTCCCGAACC AGGACGTGACTGCTGCTGAAGTCATGGCCAGCATTACCGAGGTGATGCAGCAAGACCAAGCGCTGTCCAAGTACTTGGCA TAA
Upstream 100 bases:
>100_bases GGGGAACGCGTTGTCGGCATAGTGTCGACGGTCGTTGTGGCCGGTCAGCATGATCGCCGCATCCCCAAGGAAGACACATA AAAACTTGGAGGAATTCAGG
Downstream 100 bases:
>100_bases TCGGCCAAAAAGACCGAGACAGAACCCCGCTTTTGGCGGGGTTTCGTTTTTCTGATCCTTCTTTTCTGACATTCTTGTCA GCTTGCTAATTTAGACGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKKTLIAAALLGASTSAMAVAPGGPGCGWGNMLFEGKSGMPVHFLATTVNGTSGNATFGMTSGTNGCDTNGSLTYSGQSL LGMTGVMEEVAQDMATGEGEALTALSVSMGIQTEDRARFNALMHDNFAAIFPNQDVTAAEVMASITEVMQQDQALSKYLA
Sequences:
>Translated_160_residues MKKTLIAAALLGASTSAMAVAPGGPGCGWGNMLFEGKSGMPVHFLATTVNGTSGNATFGMTSGTNGCDTNGSLTYSGQSL LGMTGVMEEVAQDMATGEGEALTALSVSMGIQTEDRARFNALMHDNFAAIFPNQDVTAAEVMASITEVMQQDQALSKYLA >Mature_160_residues MKKTLIAAALLGASTSAMAVAPGGPGCGWGNMLFEGKSGMPVHFLATTVNGTSGNATFGMTSGTNGCDTNGSLTYSGQSL LGMTGVMEEVAQDMATGEGEALTALSVSMGIQTEDRARFNALMHDNFAAIFPNQDVTAAEVMASITEVMQQDQALSKYLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16399; Mature: 16399
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 7.5 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 7.5 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTLIAAALLGASTSAMAVAPGGPGCGWGNMLFEGKSGMPVHFLATTVNGTSGNATFGM CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEE TSGTNGCDTNGSLTYSGQSLLGMTGVMEEVAQDMATGEGEALTALSVSMGIQTEDRARFN CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHH ALMHDNFAAIFPNQDVTAAEVMASITEVMQQDQALSKYLA HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKTLIAAALLGASTSAMAVAPGGPGCGWGNMLFEGKSGMPVHFLATTVNGTSGNATFGM CCHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEECCCCCCEEEEE TSGTNGCDTNGSLTYSGQSLLGMTGVMEEVAQDMATGEGEALTALSVSMGIQTEDRARFN CCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHH ALMHDNFAAIFPNQDVTAAEVMASITEVMQQDQALSKYLA HHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA