Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835115

Identifier: 110835115

GI number: 110835115

Start: 2573496

End: 2575319

Strand: Reverse

Name: 110835115

Synonym: ABO_2254

Alternate gene names: NA

Gene position: 2575319-2573496 (Counterclockwise)

Preceding gene: 110835116

Following gene: 110835114

Centisome position: 82.54

GC content: 54.5

Gene sequence:

>1824_bases
ATGCGCACTGGCCTTTTCTGTGTGCTGCTGTGCTGGTTTGTGCCGGCGTTTGCTGCAACTTCTTCCTTTTCTACGCTGGC
AGACATGCCCCGCTGGCAGGCGTTATTGCATATCAATCCTGGTGCTACCCTGCGTGACAAGCACCAGAGTTACGTGGATG
ACGACCGCTTTTTTTTGGCTGACTCAGGGAAGATAGATCCGCTAGCGGAGCTGGAAGCGACTGAGCAGGCTCTTCGCCCA
GCCGGGGCGCCTGCGCGATGCCGTTTCCCTGCGCGTTATCGTTTCTTATCCGAAAAACTGGGTTGGCAGAATGAGTCGCC
GTTTTCACACTGCGATGATTACAATGAATGGCGGGATGCGATTCATGCTAACCGTGCGGTGTTGGTTTTTCCTGCCGCTT
ATTTGAATAGCCCTTCATCCATGTTTGGGCATACCTTGCTGCGACTGGATCAGGGCGAAGACAGTGCCGTCTGGTTGTCA
TGGGCTGTCAATTTCGGGGCGGTTTCATCCGACTCCGATAACTCTTTTTTCTATATTTATCGCGGTTTGGCGGGCGGTTA
TCCGGGTCGCTTTGCGCTGGTGCCCTATGTGCAGAAAATTCAGGAATATTCGCACATGGAAAACCGGGATATGTGGGAAT
ACACCCTGGATCTGGATCAGTCTGAAATCGACTGGCTGATCGATCATCTCTGGGAACTCAAAGAGATCAATTTTGATTAC
TACTTCTTTGATGAGAATTGCTCATTTCGTTTGCTTGAGCTGGTGGAAGTGGCACGCCCGGGCTCCGGGTTGTTAAGTGA
GTTGAGGTTTGCCGAAGTGCCTGTCAACACAGTGCGAGCGCTGGATGAGCGGGAGATCATTAGCCGCCGGTATTATCGGC
CTTCCAAGTCCGTTGAGCTGGATAATCTGCGTCTGCAGCTCAATGCTTCCCAGCAAAAACTGGCAAGAGCGCTGGCCGAT
GATCCCGGCCTGGCCAAGTCGTCAGCTTTTTTGGCTGAACCTGCAGAAACACGAGCGATTATGGCGGCGGTGGCTTATCG
CTACATCAGGCTTACCCACCGCAAGGAACAGCGAACGCCAGCGGTGGCGAAACGCTCGTTTACGCTGCTGACTCTAATCA
ATAGTCTGCCGGCAGTGCCGGTACCCGAAACCGAGCACCCCGAGCCACCGGAAAAGGGGCATGGCACCCAGATGTTGGGC
GTTAGCGGTGGCCAACGTGAAGGTGAGCTGGATTTTGGTGAGCTGACCTACCGGTTGACCTACCATGATTTGCTCGACAA
CCAATACGGCTTCCTGCGTGGCGCACAGATCGAAGGGTTGGATATGACTCTGCGCAGCACTGAGTCTGGCCAGGTCAAAT
TGGAAGAGCTGGATGTGGTCAGTATTCGGTCCCTAGCGCCACGAAATCGCTTCATGAAGCCATTAAGCTGGTATGTAGAG
GGAGGTTTGGAGCGGACTTGGGCGGGGCGTCGCCGGTTGGTGCGCTATATGCAAGGAGGTGCTGGCGGAAGCTGGCTGTG
GAGGAACTGGCAGCCGTATCTGTTAACCAGCGTGCGAATGGAGAATAATAGCGAGTTCGGCACCTTCCTGACCCCGGGGG
CCGGTCTAGACACGGGTATTGTTTATCACCGTGGCGACTGGCAGTGGCAGTTAGGCGGAGTGGGGCACTATTTCACCAAC
GATGAATATCGATACACCTCCCAGTTTGCGGTGCAGTGGGCAATGACCCGCCAGCATGGCTTGCGCGCTTCTCTTGCGCG
TGAGAACCGCAGGGGCGGTTATGATGATGAGTTCAAACTCCAATGGCGATGGTATTACGATTAA

Upstream 100 bases:

>100_bases
AAAGACCGAGACAGAACCCCGCTTTTGGCGGGGTTTCGTTTTTCTGATCCTTCTTTTCTGACATTCTTGTCAGCTTGCTA
ATTTAGACGGATGAATCCGG

Downstream 100 bases:

>100_bases
GCACAGCGCTTCTGCTGAGCCTGCTGCTGGTAGGGTGTAGCAAGCTGTTTTTCTACCCCATGTCTGCGTGGGTGCAGAAC
CCAGAAAACCAAGGGCTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 607; Mature: 607

Protein sequence:

>607_residues
MRTGLFCVLLCWFVPAFAATSSFSTLADMPRWQALLHINPGATLRDKHQSYVDDDRFFLADSGKIDPLAELEATEQALRP
AGAPARCRFPARYRFLSEKLGWQNESPFSHCDDYNEWRDAIHANRAVLVFPAAYLNSPSSMFGHTLLRLDQGEDSAVWLS
WAVNFGAVSSDSDNSFFYIYRGLAGGYPGRFALVPYVQKIQEYSHMENRDMWEYTLDLDQSEIDWLIDHLWELKEINFDY
YFFDENCSFRLLELVEVARPGSGLLSELRFAEVPVNTVRALDEREIISRRYYRPSKSVELDNLRLQLNASQQKLARALAD
DPGLAKSSAFLAEPAETRAIMAAVAYRYIRLTHRKEQRTPAVAKRSFTLLTLINSLPAVPVPETEHPEPPEKGHGTQMLG
VSGGQREGELDFGELTYRLTYHDLLDNQYGFLRGAQIEGLDMTLRSTESGQVKLEELDVVSIRSLAPRNRFMKPLSWYVE
GGLERTWAGRRRLVRYMQGGAGGSWLWRNWQPYLLTSVRMENNSEFGTFLTPGAGLDTGIVYHRGDWQWQLGGVGHYFTN
DEYRYTSQFAVQWAMTRQHGLRASLARENRRGGYDDEFKLQWRWYYD

Sequences:

>Translated_607_residues
MRTGLFCVLLCWFVPAFAATSSFSTLADMPRWQALLHINPGATLRDKHQSYVDDDRFFLADSGKIDPLAELEATEQALRP
AGAPARCRFPARYRFLSEKLGWQNESPFSHCDDYNEWRDAIHANRAVLVFPAAYLNSPSSMFGHTLLRLDQGEDSAVWLS
WAVNFGAVSSDSDNSFFYIYRGLAGGYPGRFALVPYVQKIQEYSHMENRDMWEYTLDLDQSEIDWLIDHLWELKEINFDY
YFFDENCSFRLLELVEVARPGSGLLSELRFAEVPVNTVRALDEREIISRRYYRPSKSVELDNLRLQLNASQQKLARALAD
DPGLAKSSAFLAEPAETRAIMAAVAYRYIRLTHRKEQRTPAVAKRSFTLLTLINSLPAVPVPETEHPEPPEKGHGTQMLG
VSGGQREGELDFGELTYRLTYHDLLDNQYGFLRGAQIEGLDMTLRSTESGQVKLEELDVVSIRSLAPRNRFMKPLSWYVE
GGLERTWAGRRRLVRYMQGGAGGSWLWRNWQPYLLTSVRMENNSEFGTFLTPGAGLDTGIVYHRGDWQWQLGGVGHYFTN
DEYRYTSQFAVQWAMTRQHGLRASLARENRRGGYDDEFKLQWRWYYD
>Mature_607_residues
MRTGLFCVLLCWFVPAFAATSSFSTLADMPRWQALLHINPGATLRDKHQSYVDDDRFFLADSGKIDPLAELEATEQALRP
AGAPARCRFPARYRFLSEKLGWQNESPFSHCDDYNEWRDAIHANRAVLVFPAAYLNSPSSMFGHTLLRLDQGEDSAVWLS
WAVNFGAVSSDSDNSFFYIYRGLAGGYPGRFALVPYVQKIQEYSHMENRDMWEYTLDLDQSEIDWLIDHLWELKEINFDY
YFFDENCSFRLLELVEVARPGSGLLSELRFAEVPVNTVRALDEREIISRRYYRPSKSVELDNLRLQLNASQQKLARALAD
DPGLAKSSAFLAEPAETRAIMAAVAYRYIRLTHRKEQRTPAVAKRSFTLLTLINSLPAVPVPETEHPEPPEKGHGTQMLG
VSGGQREGELDFGELTYRLTYHDLLDNQYGFLRGAQIEGLDMTLRSTESGQVKLEELDVVSIRSLAPRNRFMKPLSWYVE
GGLERTWAGRRRLVRYMQGGAGGSWLWRNWQPYLLTSVRMENNSEFGTFLTPGAGLDTGIVYHRGDWQWQLGGVGHYFTN
DEYRYTSQFAVQWAMTRQHGLRASLARENRRGGYDDEFKLQWRWYYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69812; Mature: 69812

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTGLFCVLLCWFVPAFAATSSFSTLADMPRWQALLHINPGATLRDKHQSYVDDDRFFLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE
DSGKIDPLAELEATEQALRPAGAPARCRFPARYRFLSEKLGWQNESPFSHCDDYNEWRDA
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IHANRAVLVFPAAYLNSPSSMFGHTLLRLDQGEDSAVWLSWAVNFGAVSSDSDNSFFYIY
HHCCCEEEEEEHHHHCCCHHHHHHEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEE
RGLAGGYPGRFALVPYVQKIQEYSHMENRDMWEYTLDLDQSEIDWLIDHLWELKEINFDY
ECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEE
YFFDENCSFRLLELVEVARPGSGLLSELRFAEVPVNTVRALDEREIISRRYYRPSKSVEL
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEE
DNLRLQLNASQQKLARALADDPGLAKSSAFLAEPAETRAIMAAVAYRYIRLTHRKEQRTP
CCEEEEECCCHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AVAKRSFTLLTLINSLPAVPVPETEHPEPPEKGHGTQMLGVSGGQREGELDFGELTYRLT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEEEEE
YHDLLDNQYGFLRGAQIEGLDMTLRSTESGQVKLEELDVVSIRSLAPRNRFMKPLSWYVE
HHHHHCCCCCCEECCEECCCEEEEECCCCCCEEEEEECEEHHHHCCCHHHHHHHHHHHHH
GGLERTWAGRRRLVRYMQGGAGGSWLWRNWQPYLLTSVRMENNSEFGTFLTPGAGLDTGI
CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEECCCCCCCCEECCCCCCCCCE
VYHRGDWQWQLGGVGHYFTNDEYRYTSQFAVQWAMTRQHGLRASLARENRRGGYDDEFKL
EEECCCCEEEECCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE
QWRWYYD
EEEEECC
>Mature Secondary Structure
MRTGLFCVLLCWFVPAFAATSSFSTLADMPRWQALLHINPGATLRDKHQSYVDDDRFFLA
CCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEE
DSGKIDPLAELEATEQALRPAGAPARCRFPARYRFLSEKLGWQNESPFSHCDDYNEWRDA
CCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
IHANRAVLVFPAAYLNSPSSMFGHTLLRLDQGEDSAVWLSWAVNFGAVSSDSDNSFFYIY
HHCCCEEEEEEHHHHCCCHHHHHHEEEEEECCCCCEEEEEEEEECCCCCCCCCCCEEEEE
RGLAGGYPGRFALVPYVQKIQEYSHMENRDMWEYTLDLDQSEIDWLIDHLWELKEINFDY
ECCCCCCCCCEEHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCEE
YFFDENCSFRLLELVEVARPGSGLLSELRFAEVPVNTVRALDEREIISRRYYRPSKSVEL
EEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEE
DNLRLQLNASQQKLARALADDPGLAKSSAFLAEPAETRAIMAAVAYRYIRLTHRKEQRTP
CCEEEEECCCHHHHHHHHCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
AVAKRSFTLLTLINSLPAVPVPETEHPEPPEKGHGTQMLGVSGGQREGELDFGELTYRLT
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHEEEEEE
YHDLLDNQYGFLRGAQIEGLDMTLRSTESGQVKLEELDVVSIRSLAPRNRFMKPLSWYVE
HHHHHCCCCCCEECCEECCCEEEEECCCCCCEEEEEECEEHHHHCCCHHHHHHHHHHHHH
GGLERTWAGRRRLVRYMQGGAGGSWLWRNWQPYLLTSVRMENNSEFGTFLTPGAGLDTGI
CCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEEEEECCCCCCCCEECCCCCCCCCE
VYHRGDWQWQLGGVGHYFTNDEYRYTSQFAVQWAMTRQHGLRASLARENRRGGYDDEFKL
EEECCCCEEEECCEEEEECCCCEEEEHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE
QWRWYYD
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA