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The map label for this gene is pilQ [H]

Identifier: 110835094

GI number: 110835094

Start: 2550238

End: 2552409

Strand: Reverse

Name: pilQ [H]

Synonym: ABO_2233

Alternate gene names: 110835094

Gene position: 2552409-2550238 (Counterclockwise)

Preceding gene: 110835095

Following gene: 110835093

Centisome position: 81.8

GC content: 49.54

Gene sequence:

>2172_bases
ATGAAATGTGCAAGATCGACAATAAAAAATAGCGCTTCCCGGCGTCTGGCGGGGCTGGTTTCTGTAGGAGTGTTGTCTGC
CCTCTCTATGGTTGCGGGCGCAGATACACTGAAATACATCGAAGCTAATGCTTTATCCGGTGATGGCATGGAAGTTCGCC
TGAAGTTTGAAGGTGGTGTGCCGGAAGTGAAGGGATACAGTATCGAACAGCCTGCTCGTATTGCATTGGACCTTGTCGGT
GCGGATTCGGATATTGCGGGAAAGCGGCAAAACCTTGGTTCTGGTAACGCTCGTAGTGTCACCATTGTTGAAGCAAAAGA
CAGGACGCGGCTGATTTTTAATTTGGAATCGCTGACTGGCTATTCAACCCGTACCGAGGGTGATGATCTGATTGTTCTGT
TGGGTAATGATCAAGTTGATAAGCAGAAACAGGCTTCACAGGGAAATGATTACAATGGCGAGGCCGCTGTAACGGGGGTC
GATTTTCGGCGTGGAGAAAGTGGCGAAGGACGCGTCATTATCAAATTGTCTGAACCATCCATTCCTGTAGATGTGAAAGA
AGAGAGCGGCAAAATCGTGGCTCGATTTGTGGGTGCAGGAGTGCCTAACGAGCTGGTGCGTAAACTGGATGTGACCGATT
TTGCAACGCCAGTCAAAATGGTGGAAACGCAGTCTGCAGATGGCAGCACCATGGTTGTTATTGAGCCGACCGGGGTATGG
GAATATATGGCATACCAGGCGGACACCGAGTTCAGTATTAACATTAAGCCGGTTAGTAAAGCAGAAGTGGCAAGAAAGAA
GAAAAATGCGTTCCAGTATACGGGGGAAAAACTTTCCTTGAATTTCCAGGATATTGAGGTGCGCTCCGTTCTTCAATTAA
TTGCGGATTTCACGGGGCTTAACCTGGTTGCCTCTGACACAGTAGACGGTCGAATTACGCTGCGTTTGCAGAATGTGCCA
TGGGATCAGGCGCTGGAATTGATTCTGAAAACCAAGGGGTTGGATAAACGTCAGGTGGGCAATGTTCTGCTGGTTGCGCC
AGCGGATGAAATTGCAGCCCGTGAGCAGTTAGAGCTGGAAAGCCAGAAAAAAATTGAGGCACTGGCTCCTCTGCGAACCG
AATATATCAATATCAATTATGCTAATGCGTCGGAGTTGAAAGAGCTGATCTCCAACGCTGGCGGTAAGGGCGAAGCGCTA
GTCTCCGGGCGTGGCTCTGTGGTTGTAGATCAGCGTACGAATACACTCATTGTTCAGGATACCCAGGCCAAATTGCAGGA
AATACGTGAGCTAATCGATCAGCTTGATATTCCTGTTCAGCAAGTGCTCATCGAGGCTCGGGTCGTGGTGGCGACCAATG
ATGTGACCGACGAGTTTGGTGTGCGTTGGGGGGGGCTGGGTTTTGATACGGAGAGTATGCTTGAGGATGGTCGTACCTTC
GGTGTTTCGGGTCGTTTGCAATCTCTAAGGAACCTCCATCAGACTAATATTGATGCAACTATCGCTTATCCCGACACTGT
TGGCGGGCACCCTGGCGATGTGGAATTTGGGCCGGATGATTTTCAGTTTCAAGAGGCTGAAAACGATGATGATCTCATTG
TTGATCTAGGCGTGGATTCTGCCAGTGCATCCCGGTTTGCAGTAGGCTTTACCTCTCTTGCCTCTGGTTTGATTGAGCTC
GAGTTGTCCGCATTGGAAGCGGAAGGGCACGGTGAATTGGTGGCAACACCGAAGGTTTTGACCGCGGATCAGCAGCCCGC
AGTGATCGCTTCCGGTCAGCAAGTGCCTTTCGAAATAGCGACCTCCTCTGGTGCGACCTCCATCGATTTTGTGGAAGCAG
AGCTGCGACTGGAAGTGACTCCGCATATCACCCCAGATGGCAATATCATCATGATGCTGAAAGTGAACAATGACTCCTTT
AGTTCAGACGGTTCTGCAGCGATTAATACCAATCGGGTGGAAACGTCTGTGCTGGTTAACGATGGCGAGACAGTGGTGCT
TGGTGGTATCTTCCAGCAAGAGAAGATCAATTCTGTGACTAAGACACCTTTTCTGGGTGACTTGCCATGGATTGGTGCCC
TGTTTAGGAAGACTGTCAATCGTGATAACAAGCAAGAATTGCTGATCTTTATTACGCCACGGTTGATGAAGGATGCTTTG
GCTAATCGGTGA

Upstream 100 bases:

>100_bases
AAGTGAGTCTGATTGAAATCGTACCGGATGGTCGGGATGGCTGGGTGGAACGCGCCAGTAACGTCTCGATTTCCGAATAA
CAGCCGCTGGGGATCCAGTT

Downstream 100 bases:

>100_bases
TCAAAACTAATTCTATTGTTCCTTTAATTCTTGTCGGGCCTATGGGTGCGGGGAAAAGCACCTTGGGCAGGCATCTTGCT
CAGGTGTTGGACCGCCCGTT

Product: fimbrial assembly protein pilQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 723; Mature: 723

Protein sequence:

>723_residues
MKCARSTIKNSASRRLAGLVSVGVLSALSMVAGADTLKYIEANALSGDGMEVRLKFEGGVPEVKGYSIEQPARIALDLVG
ADSDIAGKRQNLGSGNARSVTIVEAKDRTRLIFNLESLTGYSTRTEGDDLIVLLGNDQVDKQKQASQGNDYNGEAAVTGV
DFRRGESGEGRVIIKLSEPSIPVDVKEESGKIVARFVGAGVPNELVRKLDVTDFATPVKMVETQSADGSTMVVIEPTGVW
EYMAYQADTEFSINIKPVSKAEVARKKKNAFQYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVP
WDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISNAGGKGEAL
VSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTF
GVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIEL
ELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIATSSGATSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSF
SSDGSAAINTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDAL
ANR

Sequences:

>Translated_723_residues
MKCARSTIKNSASRRLAGLVSVGVLSALSMVAGADTLKYIEANALSGDGMEVRLKFEGGVPEVKGYSIEQPARIALDLVG
ADSDIAGKRQNLGSGNARSVTIVEAKDRTRLIFNLESLTGYSTRTEGDDLIVLLGNDQVDKQKQASQGNDYNGEAAVTGV
DFRRGESGEGRVIIKLSEPSIPVDVKEESGKIVARFVGAGVPNELVRKLDVTDFATPVKMVETQSADGSTMVVIEPTGVW
EYMAYQADTEFSINIKPVSKAEVARKKKNAFQYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVP
WDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISNAGGKGEAL
VSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTF
GVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIEL
ELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIATSSGATSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSF
SSDGSAAINTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDAL
ANR
>Mature_723_residues
MKCARSTIKNSASRRLAGLVSVGVLSALSMVAGADTLKYIEANALSGDGMEVRLKFEGGVPEVKGYSIEQPARIALDLVG
ADSDIAGKRQNLGSGNARSVTIVEAKDRTRLIFNLESLTGYSTRTEGDDLIVLLGNDQVDKQKQASQGNDYNGEAAVTGV
DFRRGESGEGRVIIKLSEPSIPVDVKEESGKIVARFVGAGVPNELVRKLDVTDFATPVKMVETQSADGSTMVVIEPTGVW
EYMAYQADTEFSINIKPVSKAEVARKKKNAFQYTGEKLSLNFQDIEVRSVLQLIADFTGLNLVASDTVDGRITLRLQNVP
WDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLELESQKKIEALAPLRTEYININYANASELKELISNAGGKGEAL
VSGRGSVVVDQRTNTLIVQDTQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTF
GVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDSASASRFAVGFTSLASGLIEL
ELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIATSSGATSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSF
SSDGSAAINTNRVETSVLVNDGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDAL
ANR

Specific function: Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a "porthole" allowing passage of the fimbrae through the outer membrane [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=453, Percent_Identity=33.5540838852097, Blast_Score=227, Evalue=2e-60,
Organism=Escherichia coli, GI87082242, Length=374, Percent_Identity=24.8663101604278, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR013355
- InterPro:   IPR011662
- InterPro:   IPR004846
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N; PF07660 STN [H]

EC number: NA

Molecular weight: Translated: 78108; Mature: 78108

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCARSTIKNSASRRLAGLVSVGVLSALSMVAGADTLKYIEANALSGDGMEVRLKFEGGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEEEECCCC
PEVKGYSIEQPARIALDLVGADSDIAGKRQNLGSGNARSVTIVEAKDRTRLIFNLESLTG
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHHCC
YSTRTEGDDLIVLLGNDQVDKQKQASQGNDYNGEAAVTGVDFRRGESGEGRVIIKLSEPS
CCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCC
IPVDVKEESGKIVARFVGAGVPNELVRKLDVTDFATPVKMVETQSADGSTMVVIEPTGVW
CCEEEECCCCCEEEEECCCCCCHHHHHHCCCCHHCCCHHEEEECCCCCCEEEEEECCCCE
EYMAYQADTEFSINIKPVSKAEVARKKKNAFQYTGEKLSLNFQDIEVRSVLQLIADFTGL
EEEEEECCCEEEEEEECCCHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHCCCC
NLVASDTVDGRITLRLQNVPWDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLELE
EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEEECCHHHHHHHHHHHH
SQKKIEALAPLRTEYININYANASELKELISNAGGKGEALVSGRGSVVVDQRTNTLIVQD
HHHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEC
TQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTF
HHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECCCCHHHCCEECCCCCCHHHHHHCCCEE
GVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDS
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCC
ASASRFAVGFTSLASGLIELELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIA
CCCCEEEEEHHHHHCCCEEEEEEEEECCCCCCEEECCCEEECCCCCCEEECCCCCCEEEE
TSSGATSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSFSSDGSAAINTNRVETSVLVN
CCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEEEE
DGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDAL
CCCEEEEECCCCHHHHCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
ANR
CCC
>Mature Secondary Structure
MKCARSTIKNSASRRLAGLVSVGVLSALSMVAGADTLKYIEANALSGDGMEVRLKFEGGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEEECCCCCCCEEEEEEECCCC
PEVKGYSIEQPARIALDLVGADSDIAGKRQNLGSGNARSVTIVEAKDRTRLIFNLESLTG
CCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEHHHCC
YSTRTEGDDLIVLLGNDQVDKQKQASQGNDYNGEAAVTGVDFRRGESGEGRVIIKLSEPS
CCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCC
IPVDVKEESGKIVARFVGAGVPNELVRKLDVTDFATPVKMVETQSADGSTMVVIEPTGVW
CCEEEECCCCCEEEEECCCCCCHHHHHHCCCCHHCCCHHEEEECCCCCCEEEEEECCCCE
EYMAYQADTEFSINIKPVSKAEVARKKKNAFQYTGEKLSLNFQDIEVRSVLQLIADFTGL
EEEEEECCCEEEEEEECCCHHHHHHHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHCCCC
NLVASDTVDGRITLRLQNVPWDQALELILKTKGLDKRQVGNVLLVAPADEIAAREQLELE
EEEEECCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHCCEEEEECCHHHHHHHHHHHH
SQKKIEALAPLRTEYININYANASELKELISNAGGKGEALVSGRGSVVVDQRTNTLIVQD
HHHHHHHHCCCEEEEEEEEECCHHHHHHHHHCCCCCCCEEEECCCCEEEECCCCEEEEEC
TQAKLQEIRELIDQLDIPVQQVLIEARVVVATNDVTDEFGVRWGGLGFDTESMLEDGRTF
HHHHHHHHHHHHHHHCCCHHHHHHHEEEEEEECCCCHHHCCEECCCCCCHHHHHHCCCEE
GVSGRLQSLRNLHQTNIDATIAYPDTVGGHPGDVEFGPDDFQFQEAENDDDLIVDLGVDS
CCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCC
ASASRFAVGFTSLASGLIELELSALEAEGHGELVATPKVLTADQQPAVIASGQQVPFEIA
CCCCEEEEEHHHHHCCCEEEEEEEEECCCCCCEEECCCEEECCCCCCEEECCCCCCEEEE
TSSGATSIDFVEAELRLEVTPHITPDGNIIMMLKVNNDSFSSDGSAAINTNRVETSVLVN
CCCCCCEEEEEEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEEECCCEEEEEEEE
DGETVVLGGIFQQEKINSVTKTPFLGDLPWIGALFRKTVNRDNKQELLIFITPRLMKDAL
CCCEEEEECCCCHHHHCHHHCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
ANR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7901733; 10984043 [H]