| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is aroK [H]
Identifier: 110835093
GI number: 110835093
Start: 2549705
End: 2550196
Strand: Reverse
Name: aroK [H]
Synonym: ABO_2232
Alternate gene names: 110835093
Gene position: 2550196-2549705 (Counterclockwise)
Preceding gene: 110835094
Following gene: 110835092
Centisome position: 81.73
GC content: 58.54
Gene sequence:
>492_bases ATGGGTGCGGGGAAAAGCACCTTGGGCAGGCATCTTGCTCAGGTGTTGGACCGCCCGTTTTTCGACTCTGATCGTGTAAT CGAGGAGAAAACTGGCGCGGATATTCCCTGGATCTTCGATATGGAAGGTGAGGAGGGGTTTCGGCGGCGGGAACAAGATG TGATTGACGAGCTAACCCGGGAGCCTGGCATCGTGCTGGCTACCGGCGGCGGGGTGGTGGTTACCCCGGAGAATCGAGCC TTTCTTCATGAGCGCGGCTGTGTCGTCTACCTGTGGACACCGGTAGAGGTTCAGCTGGCCCGGACTCGCAATGACAAAGG GCGCCCACTGCTGCAAACGGCAGATCCCAAGGCGCGGCTGGATGCCTTGTTCGCCGAGCGTGATCCGCTCTATCGGCAGG TGGCTCATCATGTGGTCTCGACGGCATCAGGAAACCTGAAAAAAGTCGCGGATGACGTGCTCGCTTGTTTGGACTCTCAG CCACAAGGATAA
Upstream 100 bases:
>100_bases AAGAATTGCTGATCTTTATTACGCCACGGTTGATGAAGGATGCTTTGGCTAATCGGTGATCAAAACTAATTCTATTGTTC CTTTAATTCTTGTCGGGCCT
Downstream 100 bases:
>100_bases TGCAGGCAACTGTCGGGCTGGTGCTTGGCCTATTTTGCTGAATTATCATTGGGAGCTGTAATGCGCACACTTCAGGTGGC CTTGGCCGAGCGGAGTTACC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MGAGKSTLGRHLAQVLDRPFFDSDRVIEEKTGADIPWIFDMEGEEGFRRREQDVIDELTREPGIVLATGGGVVVTPENRA FLHERGCVVYLWTPVEVQLARTRNDKGRPLLQTADPKARLDALFAERDPLYRQVAHHVVSTASGNLKKVADDVLACLDSQ PQG
Sequences:
>Translated_163_residues MGAGKSTLGRHLAQVLDRPFFDSDRVIEEKTGADIPWIFDMEGEEGFRRREQDVIDELTREPGIVLATGGGVVVTPENRA FLHERGCVVYLWTPVEVQLARTRNDKGRPLLQTADPKARLDALFAERDPLYRQVAHHVVSTASGNLKKVADDVLACLDSQ PQG >Mature_162_residues GAGKSTLGRHLAQVLDRPFFDSDRVIEEKTGADIPWIFDMEGEEGFRRREQDVIDELTREPGIVLATGGGVVVTPENRAF LHERGCVVYLWTPVEVQLARTRNDKGRPLLQTADPKARLDALFAERDPLYRQVAHHVVSTASGNLKKVADDVLACLDSQP QG
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=160, Percent_Identity=55, Blast_Score=172, Evalue=1e-44, Organism=Escherichia coli, GI1786587, Length=141, Percent_Identity=36.8794326241135, Blast_Score=94, Evalue=7e-21,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 18105; Mature: 17973
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGKSTLGRHLAQVLDRPFFDSDRVIEEKTGADIPWIFDMEGEEGFRRREQDVIDELTR CCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHC EPGIVLATGGGVVVTPENRAFLHERGCVVYLWTPVEVQLARTRNDKGRPLLQTADPKARL CCCEEEEECCCEEECCCCCEEHCCCCEEEEEECCCEEEEEECCCCCCCCCEECCCCHHHH DALFAERDPLYRQVAHHVVSTASGNLKKVADDVLACLDSQPQG HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GAGKSTLGRHLAQVLDRPFFDSDRVIEEKTGADIPWIFDMEGEEGFRRREQDVIDELTR CCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHHC EPGIVLATGGGVVVTPENRAFLHERGCVVYLWTPVEVQLARTRNDKGRPLLQTADPKARL CCCEEEEECCCEEECCCCCEEHCCCCEEEEEECCCEEEEEECCCCCCCCCEECCCCHHHH DALFAERDPLYRQVAHHVVSTASGNLKKVADDVLACLDSQPQG HHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA