Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835091

Identifier: 110835091

GI number: 110835091

Start: 2547073

End: 2548614

Strand: Reverse

Name: 110835091

Synonym: ABO_2230

Alternate gene names: NA

Gene position: 2548614-2547073 (Counterclockwise)

Preceding gene: 110835092

Following gene: 110835090

Centisome position: 81.68

GC content: 56.94

Gene sequence:

>1542_bases
ATGACGGCGCGGCATTGCAAAAAACATTGGAGGCTTTTTGTGGAGCATGATGACGAGCGTTTCTATAGCGGTGCCTCGCG
TGGGGACTTTCTGGATGCCATGACGGCCCACGCCGAGCAGGGCTCGGTGGTCGCTATAGAGGGCGACACCGGCAGTGGTG
TTTCTATACTGCTCGGGCAGGCAGTGATGGCCTTAATTACTGACATGGAAGTGGTTCGCATTGATGGCAGTAAGCCCCAT
GATGCCTCTGTGGTGGTTGAGGCTTTGCTGCGACATTTCGATATTGACCGTGCTGACTTGCCCCAAGTGTTGCGCGAAAC
GCTGGCGACTGGCCGTTTGGTTGTGGTGGTAGATAATAGTGAGGACCTGAGAGCTGATGCGCTGACGACCATGGAGGCCC
TAAAGCAAAAGCTGGGGGCACGATTGTGCTATTTGTTTGGCGGTCTGCCGGGTACGGTTGAGGCGCTCAAATCCGTGGGT
TTTACCGTGGATGATATGTTGGATCTGCCTAAGCTGAATGCCGATGATGTGCAGGATTTTGCTTGGCTTGTAGCCGGTGT
TGAACTGGATGACGAGGAGTCTGAGCAGTTAGCGCACCGTAGTGAAGGGTTGCCGGGGGCTTTGCTGGGATTGCTGCAGG
GTACCAGAGGGAGTGTAGCAGCAGTGCCGGTGGGGGCGATGACGGCAGGGCGCAATAACGTAGATGAAACCGATGAGGCG
GAAGGCGACATGAGTGATATGTCGGGTTTCTCCGCGCGCTCCAGCGACGATGAAGATGATGAAGAGCGGCTGTCGGCGGT
GCCGACTCATGCGGCCGTCGTTTCGCATACCACGGCGCCTTGGCGCCATGGGGCGGCAGTGGTCGGTCTGTTGCTGGTGG
TTATCATTCTGTGGTCAGTATTTGCCGGTGGTGAGGATGAGGTTGTAGCACCTGATTCTCGGAAATTAGCTTTGCCTGTA
CCGCAATCCGTGCCCGCTGAGCAGGTGGCTGAATCACAGGAGCGGAAGGTGACACCGCTGAAGCCGACCATGGAGCCGGT
GGCTCGTCTTGAGGATCTAGGGGCCAAGAAGGAAGAGGGTGCGGATGGGACCAAAGAGGCACAAACCGACAATGTGCAGT
TGGCTCCAGTGACCGATCCGGTGATGCAATCTTCGCCGGCCCAAGCTCAACGGCAGGTTGAAGTGGCGCCTACGCCAGCA
AGGCCTGAAAAAACGGAGGTGGAAACGGTTTCATCAGCGCAGAGGGAAAAAACCTCAGGTTATAACCAGGCGTCTTGGTT
GGCTGCGGTGGATGACGACAGCTGGTTCCTGCAGATTACAGCCACCAGCCAGGAGGCCAATGCTCGTGGGGTGTTGGACC
AATTGGGCCGTAAGGGGGCCTATTATCCGGCCAAGCGGAATGATAAAACCGTGTTTGTGGTGCTCGCTGGCGACTATTCC
AGTCGTCAGGCCGCTGTGGATGCAAAGTCGACGTTACCGGCGAAGTTACGCGCAGCGGGTCCCTTTCCTCGCAAGATGGC
CGATATTCGCGGAGAACTTTGA

Upstream 100 bases:

>100_bases
CAATTTATGGACCTAATGGCCTTGGATAAGAAGGTTCATAATGGCCAGTTGCGCCTTGTGTTGCTGCGTGAGCTGGGTAA
GGCTGTGGTAACGGCGGATT

Downstream 100 bases:

>100_bases
GCAGAAAAAGCGCCTTGGGTGGCGGTTCAGTTTGTCGCCCAAGCGCGCAATGTGTAGAATGTGTATCCCTTTTTTGCCGT
CACCATTTTCTTGACGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MTARHCKKHWRLFVEHDDERFYSGASRGDFLDAMTAHAEQGSVVAIEGDTGSGVSILLGQAVMALITDMEVVRIDGSKPH
DASVVVEALLRHFDIDRADLPQVLRETLATGRLVVVVDNSEDLRADALTTMEALKQKLGARLCYLFGGLPGTVEALKSVG
FTVDDMLDLPKLNADDVQDFAWLVAGVELDDEESEQLAHRSEGLPGALLGLLQGTRGSVAAVPVGAMTAGRNNVDETDEA
EGDMSDMSGFSARSSDDEDDEERLSAVPTHAAVVSHTTAPWRHGAAVVGLLLVVIILWSVFAGGEDEVVAPDSRKLALPV
PQSVPAEQVAESQERKVTPLKPTMEPVARLEDLGAKKEEGADGTKEAQTDNVQLAPVTDPVMQSSPAQAQRQVEVAPTPA
RPEKTEVETVSSAQREKTSGYNQASWLAAVDDDSWFLQITATSQEANARGVLDQLGRKGAYYPAKRNDKTVFVVLAGDYS
SRQAAVDAKSTLPAKLRAAGPFPRKMADIRGEL

Sequences:

>Translated_513_residues
MTARHCKKHWRLFVEHDDERFYSGASRGDFLDAMTAHAEQGSVVAIEGDTGSGVSILLGQAVMALITDMEVVRIDGSKPH
DASVVVEALLRHFDIDRADLPQVLRETLATGRLVVVVDNSEDLRADALTTMEALKQKLGARLCYLFGGLPGTVEALKSVG
FTVDDMLDLPKLNADDVQDFAWLVAGVELDDEESEQLAHRSEGLPGALLGLLQGTRGSVAAVPVGAMTAGRNNVDETDEA
EGDMSDMSGFSARSSDDEDDEERLSAVPTHAAVVSHTTAPWRHGAAVVGLLLVVIILWSVFAGGEDEVVAPDSRKLALPV
PQSVPAEQVAESQERKVTPLKPTMEPVARLEDLGAKKEEGADGTKEAQTDNVQLAPVTDPVMQSSPAQAQRQVEVAPTPA
RPEKTEVETVSSAQREKTSGYNQASWLAAVDDDSWFLQITATSQEANARGVLDQLGRKGAYYPAKRNDKTVFVVLAGDYS
SRQAAVDAKSTLPAKLRAAGPFPRKMADIRGEL
>Mature_512_residues
TARHCKKHWRLFVEHDDERFYSGASRGDFLDAMTAHAEQGSVVAIEGDTGSGVSILLGQAVMALITDMEVVRIDGSKPHD
ASVVVEALLRHFDIDRADLPQVLRETLATGRLVVVVDNSEDLRADALTTMEALKQKLGARLCYLFGGLPGTVEALKSVGF
TVDDMLDLPKLNADDVQDFAWLVAGVELDDEESEQLAHRSEGLPGALLGLLQGTRGSVAAVPVGAMTAGRNNVDETDEAE
GDMSDMSGFSARSSDDEDDEERLSAVPTHAAVVSHTTAPWRHGAAVVGLLLVVIILWSVFAGGEDEVVAPDSRKLALPVP
QSVPAEQVAESQERKVTPLKPTMEPVARLEDLGAKKEEGADGTKEAQTDNVQLAPVTDPVMQSSPAQAQRQVEVAPTPAR
PEKTEVETVSSAQREKTSGYNQASWLAAVDDDSWFLQITATSQEANARGVLDQLGRKGAYYPAKRNDKTVFVVLAGDYSS
RQAAVDAKSTLPAKLRAAGPFPRKMADIRGEL

Specific function: Unknown

COG id: COG3266

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55038; Mature: 54907

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTARHCKKHWRLFVEHDDERFYSGASRGDFLDAMTAHAEQGSVVAIEGDTGSGVSILLGQ
CCHHHHHHHCEEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
AVMALITDMEVVRIDGSKPHDASVVVEALLRHFDIDRADLPQVLRETLATGRLVVVVDNS
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECC
EDLRADALTTMEALKQKLGARLCYLFGGLPGTVEALKSVGFTVDDMLDLPKLNADDVQDF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
AWLVAGVELDDEESEQLAHRSEGLPGALLGLLQGTRGSVAAVPVGAMTAGRNNVDETDEA
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCC
EGDMSDMSGFSARSSDDEDDEERLSAVPTHAAVVSHTTAPWRHGAAVVGLLLVVIILWSV
CCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FAGGEDEVVAPDSRKLALPVPQSVPAEQVAESQERKVTPLKPTMEPVARLEDLGAKKEEG
HCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
ADGTKEAQTDNVQLAPVTDPVMQSSPAQAQRQVEVAPTPARPEKTEVETVSSAQREKTSG
CCCCCCCCCCCEEEEECCCHHHCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC
YNQASWLAAVDDDSWFLQITATSQEANARGVLDQLGRKGAYYPAKRNDKTVFVVLAGDYS
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
SRQAAVDAKSTLPAKLRAAGPFPRKMADIRGEL
CCHHHCCCHHCCCHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TARHCKKHWRLFVEHDDERFYSGASRGDFLDAMTAHAEQGSVVAIEGDTGSGVSILLGQ
CHHHHHHHCEEEEEECCHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHH
AVMALITDMEVVRIDGSKPHDASVVVEALLRHFDIDRADLPQVLRETLATGRLVVVVDNS
HHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEECC
EDLRADALTTMEALKQKLGARLCYLFGGLPGTVEALKSVGFTVDDMLDLPKLNADDVQDF
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHCCCCCCHHHHHHH
AWLVAGVELDDEESEQLAHRSEGLPGALLGLLQGTRGSVAAVPVGAMTAGRNNVDETDEA
HHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEECCCCEECCCCCCCCCCCC
EGDMSDMSGFSARSSDDEDDEERLSAVPTHAAVVSHTTAPWRHGAAVVGLLLVVIILWSV
CCCHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
FAGGEDEVVAPDSRKLALPVPQSVPAEQVAESQERKVTPLKPTMEPVARLEDLGAKKEEG
HCCCCCCEECCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
ADGTKEAQTDNVQLAPVTDPVMQSSPAQAQRQVEVAPTPARPEKTEVETVSSAQREKTSG
CCCCCCCCCCCEEEEECCCHHHCCCCHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHCC
YNQASWLAAVDDDSWFLQITATSQEANARGVLDQLGRKGAYYPAKRNDKTVFVVLAGDYS
CCCCEEEEEECCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCC
SRQAAVDAKSTLPAKLRAAGPFPRKMADIRGEL
CCHHHCCCHHCCCHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA