| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835056
Identifier: 110835056
GI number: 110835056
Start: 2504504
End: 2506174
Strand: Reverse
Name: 110835056
Synonym: ABO_2195
Alternate gene names: NA
Gene position: 2506174-2504504 (Counterclockwise)
Preceding gene: 110835057
Following gene: 110835054
Centisome position: 80.32
GC content: 56.37
Gene sequence:
>1671_bases ATGAAAAAGATTTTTTTTATTCTGGGTATGTCTGCTTTGGTATGGCAGCTGAGCGGTTGCGGCCAATCTGATGCGTCGCA GGCGGAAAATTTGGGGCGCCTGTATTTGTCCAACCCGGCGGCGACGATTCCGCCACAGTGTTATACCAAAACCGAAGATG CCAAGGGGGTTGAGAGTAACCCCTGTTATGTCTGCCATACCGCCAGTAAAGAGCCGAATTTCACTAACGATCTTGATTTG CAGCTGGCCTACGATTTTGCCGGGCCCGCTACCGTCAATCGCTGGGAGAATCTTTTCGTTGATCGCAGTGAAGCGCGTGA AGCGATCAGTGATGAGGCGATTTTGGCTTATGTGCGAACCGATAATTATCAATCCGGGGGCGCGGTGCAGCTGGCCGAAA CCCTGACAGGAAAATTGCCTGCGCATTGGGATGGTGATGGTAATGGACACTGGGATGGTTACGTGCCTGACGTGTCCTAC CGCTTTGATGAGCATGGCTTTGACCTCGACGCAGAAGGTGAGCCGACGGGTTGGCGTGCATTGGCCTATACGCCGTTCCC GGGGGCATTTTTTCCCACTAATGGTTCTGCGGATGATGTGCTGATTCGCTTGGATTCTCCGTATCAACAGAACGAAAAAG GCGAGCCCGACATGCGGGTTTACCGTCTCAATCTGGCGATTGTGGAGTCGCTGATCAAGCGTGAGAGTGTGGCGATAGAG GCGGTGGCGGAAGCCGAGTACGGGGTCGACTTGAATCGCAACGGTGTACTGGATCGTGCTACTGAAGTGGTATTCGACTG GGCTCCCCTTGAAGGGCGTGAGATGGAGTATGTGGGGCTGGCCAGGGTGGCCCAGCAACAGGGTGCAGCGCCACTGTCAG CAGGGGCTTATCCGCTGGGCACCGAGTTTGTACATAGCGTCCGCTATCTGGATATTGCCGACGATGGCGAAGTGGTTATG GCGCCGCGAATGAAGGAGCTGCGCTACAGTCGTAAAACACGTTGGCTGACATATTTTCAGCACCGGGAGCTGGCGGATGA TGAGCTCAAGGATGCCCATGATTTTCCTGATCGCATGGAGCCTGTCATCGGGGATATAGAGCGCGGGGTGGGCAATCGCC GTGGCTGGCGTTTCAGTGGCTTCATCGAGGATGACCAGGGCGAGCTGCGGCCGCAGTCGTATGAGGAGCTGGCCACCTGC GCCGGATGTCATGGGGCTGTGGGTGCGCTGACCGATAGTACCTACACCATGGAAAGAAAGCTGGATGCCAGTCAGGGGTT TCAGCGGGGCTGGTATCACTGGAATCAGAAAAGCCTGGGAGGTATTCCCGAGCCACAACGGGAAGATGGTCGTGGCGAGT ATGCGTTTTACTTGGAGCAGGTAGGTGGAGCGGATGAGTACCGGTCCAATCAGGAGGTGCGTGAGCGTTTCTTTGATGAG GAGGGGGGCTTGAGGCCGGCCATGTTGACGCAACTGGAAGGTGATATCAGTGCGCTGGTGGTGCCCTCCGCCCGCCGGGC ACTGGAATTGAACAAGGCATACCTGTCTGTCGTTGAGGAGCAGAGTTATATCCGCGGCCGCGATGCGGTGCTCGCCCCAA TGGTCAATGTGCACAAAGAGGTGGAGGCCGGGCAGCGTACAGCCATAACCGAACCGGTGACCTATCGCTGA
Upstream 100 bases:
>100_bases CACCGTGCCTATACCGGGTATATCGGTCCGTTCCCGGCCATGGATTGAATATTAATAACGATAACGAGGAGGGCCGGGGT ATCCCCGGCCTTTTGCTGCT
Downstream 100 bases:
>100_bases GACCGCGCAGCGTGCCTGCTTCGCAGATCTGTCGAGAGCGAATGGAGATTTCCCGTCGCAGGTTTACTTGCGGCGGGTAA TCACAATCAGGGCCACGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 556; Mature: 556
Protein sequence:
>556_residues MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR
Sequences:
>Translated_556_residues MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR >Mature_556_residues MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESNPCYVCHTASKEPNFTNDLDL QLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRTDNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSY RFDEHGFDLDAEGEPTGWRALAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLGTEFVHSVRYLDIADDGEVVM APRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRMEPVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATC AGCHGAVGALTDSTYTMERKLDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKEVEAGQRTAITEPVTYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62215; Mature: 62215
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESN CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCCCHHCCCCCCCCCCCCC PCYVCHTASKEPNFTNDLDLQLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRT CEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC DNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSYRFDEHGFDLDAEGEPTGWRA CCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE LAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE EEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHE AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLG EEHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC TEFVHSVRYLDIADDGEVVMAPRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRME HHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH PVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATCAGCHGAVGALTDSTYTMERK HHHHHHHHCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHHH LDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE CCHHCCHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCHHHHHHHCCC EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKE CCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VEAGQRTAITEPVTYR HHCCCCEECCCCCCCC >Mature Secondary Structure MKKIFFILGMSALVWQLSGCGQSDASQAENLGRLYLSNPAATIPPQCYTKTEDAKGVESN CCEEEEEHHHHHHHHHHCCCCCCCHHHHHHCCEEEECCCCCCCCCHHCCCCCCCCCCCCC PCYVCHTASKEPNFTNDLDLQLAYDFAGPATVNRWENLFVDRSEAREAISDEAILAYVRT CEEEEECCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEEC DNYQSGGAVQLAETLTGKLPAHWDGDGNGHWDGYVPDVSYRFDEHGFDLDAEGEPTGWRA CCCCCCCCEEEHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCEE LAYTPFPGAFFPTNGSADDVLIRLDSPYQQNEKGEPDMRVYRLNLAIVESLIKRESVAIE EEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHE AVAEAEYGVDLNRNGVLDRATEVVFDWAPLEGREMEYVGLARVAQQQGAAPLSAGAYPLG EEHHHHCCCCCCCCCCHHHHHHHEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC TEFVHSVRYLDIADDGEVVMAPRMKELRYSRKTRWLTYFQHRELADDELKDAHDFPDRME HHHHHHEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHH PVIGDIERGVGNRRGWRFSGFIEDDQGELRPQSYEELATCAGCHGAVGALTDSTYTMERK HHHHHHHHCCCCCCCEEEECEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHHH LDASQGFQRGWYHWNQKSLGGIPEPQREDGRGEYAFYLEQVGGADEYRSNQEVRERFFDE CCHHCCHHHCCEECCCCCCCCCCCCCCCCCCCCEEEEEEHHCCCHHHCCCHHHHHHHCCC EGGLRPAMLTQLEGDISALVVPSARRALELNKAYLSVVEEQSYIRGRDAVLAPMVNVHKE CCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH VEAGQRTAITEPVTYR HHCCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]