| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110835020
Identifier: 110835020
GI number: 110835020
Start: 2469702
End: 2469959
Strand: Reverse
Name: 110835020
Synonym: ABO_2159
Alternate gene names: NA
Gene position: 2469959-2469702 (Counterclockwise)
Preceding gene: 110835023
Following gene: 110835019
Centisome position: 79.16
GC content: 46.12
Gene sequence:
>258_bases ATGAAAGAAGAAAACGCCCGCGCCTACTGGGCCGCTAACCTGCGATTGATCTTGATCTACATTGCTATTTGGTTTGCCGT CTCTTATGGCTGCGGCATATTGCTAGTGGATGAACTCAATCAAATTCAATTTTTCGGTTTCAAACTGGGCTTCTGGTTTG CACAGCAGGGGTCTATCTATGTGTTCTTGGTGCTGATCATTAAGTACGCGCACTCCATGAATAAGCTGGACCGCAAGTTT GACGTCCACGAAGACTAA
Upstream 100 bases:
>100_bases GTCGCTAGCGTCCTTTGGTTAGTCTTGGTGTTGAGCCTATCCCTTGTTTGCCAGCTGAAGGGTGGTGGCCTGATTTCCTG ATGACGCAGAGGGACGAGTA
Downstream 100 bases:
>100_bases CCGCTGAAACAGTAGATAAAGAGAGACATCCTATGGATATTCAGACACTCACTTATCTCTTTGTAGGCGGTTCGTTTGCT CTCTACATCGGGATTGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MKEENARAYWAANLRLILIYIAIWFAVSYGCGILLVDELNQIQFFGFKLGFWFAQQGSIYVFLVLIIKYAHSMNKLDRKF DVHED
Sequences:
>Translated_85_residues MKEENARAYWAANLRLILIYIAIWFAVSYGCGILLVDELNQIQFFGFKLGFWFAQQGSIYVFLVLIIKYAHSMNKLDRKF DVHED >Mature_85_residues MKEENARAYWAANLRLILIYIAIWFAVSYGCGILLVDELNQIQFFGFKLGFWFAQQGSIYVFLVLIIKYAHSMNKLDRKF DVHED
Specific function: Unknown
COG id: COG4327
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10026; Mature: 10026
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00847 MCM_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEENARAYWAANLRLILIYIAIWFAVSYGCGILLVDELNQIQFFGFKLGFWFAQQGSIY CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEEEECCCCHH VFLVLIIKYAHSMNKLDRKFDVHED HHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKEENARAYWAANLRLILIYIAIWFAVSYGCGILLVDELNQIQFFGFKLGFWFAQQGSIY CCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEEEECCCCHH VFLVLIIKYAHSMNKLDRKFDVHED HHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA