Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835018

Identifier: 110835018

GI number: 110835018

Start: 2465946

End: 2467757

Strand: Reverse

Name: 110835018

Synonym: ABO_2157

Alternate gene names: NA

Gene position: 2467757-2465946 (Counterclockwise)

Preceding gene: 110835019

Following gene: 110835017

Centisome position: 79.09

GC content: 53.92

Gene sequence:

>1812_bases
ATGATTGAACAGGAACTGAATCAGCATCCGTTCAGCTTGCTGAGTGAAGCAGGACGCCGCCGTTTGCAGGAAGGAACCGA
TCTGGCCTATTTTCAGCCGGAGGATATTATTCTTGACGCGGCCAGTACTAGTGATTCTGTGTTTGTGGTGCACAAGGGGT
GTGTGGCAGAACTAGACGTGAATGCGCCGGACAACCGTCGTCAGGTGAATATTTATGCCGCCGGTGATTTGTTCGGAGCG
ATCAGCGTATTGAACGGACAAAGCCGTTATCGTTTTTTGGCCGAGCAGCAAACGCTGTGTCATCTGATTCCCGCTAGGCT
ATTCCGCGAGCTGTGCGAAAGCGAGCCCGATTTTGGTCATTATTTTAGTCAGTGTCTGGCGGAGAAAAATCAGCGCTTGG
CAGAGCGCCGTGAAGGAGGCGTTACTCTGGCGGGCTTTATGCTGGCGCGGGTGGACGAATGCATGCGAGCGCCCTTGATT
ATGCCGGAGCGCGCCACTGTGCGTGATGCGGTAGCCGCTTTGAAGCAGCACGGCGTGGATAGTGTGTTGATTGCTCACCG
GCAGCATTACGCGATTGTTACCAAGACGGATTTATTAAGCGCTTTGGTGATGCAGGAACAATCGTCGGATACGCCGTTGG
TTCAGGTGGCGGAAACCGAACTGGTTACTGTTGCCCCCGCAGATTACTTGTTCGCGGCCCTGACCCTGATGACCCGCCAC
AAGGTGGCGCGGGTGGTGGTGATGGAGAGCAATAATGCGGTGGGGGTGGTGGAACTTACCGATGTGCTCAGTTTCTTTTC
TAGCCGTTCATATGTGGTGGGGCTGGAAATTGAAAGGGCCGGTACCCTTGAGGCATTGCAGCTAGCCAGTGCCCGCTTGC
CGGATCTTGTAAACGCCCTTATGGCTCAGGGTGTAAAAATGCGCTTTGTGATGGATTTGCTGGCCTCACTCAATGGCCGC
TTGATGAGTAAGGCTTATGAAATGGTAGTGCCTGCAGAACATCAGCGTGCCAGTCTGATAGTGATGGGGAGCGAAGGGCG
CGGTGAACAGATACTGAAAACTGATCAGGATAACGGCCTGATTATTGGCGATCATCAACAGTGGCCAGGCTGTGATCAAG
ATATGCAGCGCTTTACTCGCACGTTGCTGTCTCTTGGTTATCCCCCTTGCCCAGGTAATGTCATGGTTTCTAACCCGGAG
TGGATCGGGACGGTGTCACGCTGGCAGCGGCGTATCCATGATTGGGCGGAGGATCCCGGGGGAAAAGGGCTGTTGAATCT
GACCATTCTCACTGATACCCATACCGTGGCTGGAGATTCAGGGCTGATGGAGACAGTACGCAGCACCTTGTTTTCCCGAT
GCAGTGACGATCAGTTATTGATGGCCCATTTTGCCCGTCCGGCCTTGCAATTTTCTACGCCGTTGAATTTATTCGGCTCG
CTCAAGAAACCCCAGCATGGTATCGATATTAAGAAGGGAGCCCTGTTCCCATTGATCCACGGCGTGCGAGCCATGGCCTT
GCAGTGCCGTATTCAGGAAACCTCCACGTTGGCACGGCTGAAAAAGCTGGTGGCCGCCGGGGCTATGGAACGGGCCTTTG
CGGAGGACTTGGGTGAAGCGATGGAATTCTTTAGCGAGCTGCGGCTGTCTCAACAGCTGGCCAAATTGCGAGGCGAGAAT
ACCCAGGTAGAAGATAATCATATCGTGGTGCAGCATCTGTCTTCTTTGGAGCGTGATGTGCTGCGCGATGCCCTGCATCT
GGTCAGCGATTTCAAGCAGCGCCTGTCGCGTCGTTTTCATCTGGAATACTGA

Upstream 100 bases:

>100_bases
AAGCCGGTGCGGGTGATAATTCCGTACCGGCTTTTTGCGTTTTGAGGGCGGCCGAGAGCTGGCCAGAAAGGCAATAAAGA
AAAACGGCAGGAGTGGCCTG

Downstream 100 bases:

>100_bases
CGATGCCTGGGGACAGGAGGGGAGCTATGCTGTAGTGGCAGACGTTTAAATGGCGTCGAATTTATGATCGATATTGCCAT
GGGCGCGGACCTTATGGGCA

Product: CBS domain-containing protein

Products: NA

Alternate protein names: Signal-Transduction Protein; Nucleotidyltransferase; Signal Transduction Protein; Signal Transduction Protein With CBS Domains; Signal-Transduction Protein With CBS Domains; Nucleotidyltransferase Family; CBS Domain Protein; Signal Protein; Inosine-5-Monophosphate Dehydrogenase; DNA Polymerase III Subunit Epsilon; CBS Signal-Transduction Protein; Cyclic-Nucleotide Signal Transduction Protein; Multidomain-Containing Protein; Nucleotidyltransferase Domain Family Protein; Cyclic Nucleotide-Regulated Nucleotidyltransferase; Methyl-Accepting Chemotaxis Protein A; Nucleotidyltransferases

Number of amino acids: Translated: 603; Mature: 603

Protein sequence:

>603_residues
MIEQELNQHPFSLLSEAGRRRLQEGTDLAYFQPEDIILDAASTSDSVFVVHKGCVAELDVNAPDNRRQVNIYAAGDLFGA
ISVLNGQSRYRFLAEQQTLCHLIPARLFRELCESEPDFGHYFSQCLAEKNQRLAERREGGVTLAGFMLARVDECMRAPLI
MPERATVRDAVAALKQHGVDSVLIAHRQHYAIVTKTDLLSALVMQEQSSDTPLVQVAETELVTVAPADYLFAALTLMTRH
KVARVVVMESNNAVGVVELTDVLSFFSSRSYVVGLEIERAGTLEALQLASARLPDLVNALMAQGVKMRFVMDLLASLNGR
LMSKAYEMVVPAEHQRASLIVMGSEGRGEQILKTDQDNGLIIGDHQQWPGCDQDMQRFTRTLLSLGYPPCPGNVMVSNPE
WIGTVSRWQRRIHDWAEDPGGKGLLNLTILTDTHTVAGDSGLMETVRSTLFSRCSDDQLLMAHFARPALQFSTPLNLFGS
LKKPQHGIDIKKGALFPLIHGVRAMALQCRIQETSTLARLKKLVAAGAMERAFAEDLGEAMEFFSELRLSQQLAKLRGEN
TQVEDNHIVVQHLSSLERDVLRDALHLVSDFKQRLSRRFHLEY

Sequences:

>Translated_603_residues
MIEQELNQHPFSLLSEAGRRRLQEGTDLAYFQPEDIILDAASTSDSVFVVHKGCVAELDVNAPDNRRQVNIYAAGDLFGA
ISVLNGQSRYRFLAEQQTLCHLIPARLFRELCESEPDFGHYFSQCLAEKNQRLAERREGGVTLAGFMLARVDECMRAPLI
MPERATVRDAVAALKQHGVDSVLIAHRQHYAIVTKTDLLSALVMQEQSSDTPLVQVAETELVTVAPADYLFAALTLMTRH
KVARVVVMESNNAVGVVELTDVLSFFSSRSYVVGLEIERAGTLEALQLASARLPDLVNALMAQGVKMRFVMDLLASLNGR
LMSKAYEMVVPAEHQRASLIVMGSEGRGEQILKTDQDNGLIIGDHQQWPGCDQDMQRFTRTLLSLGYPPCPGNVMVSNPE
WIGTVSRWQRRIHDWAEDPGGKGLLNLTILTDTHTVAGDSGLMETVRSTLFSRCSDDQLLMAHFARPALQFSTPLNLFGS
LKKPQHGIDIKKGALFPLIHGVRAMALQCRIQETSTLARLKKLVAAGAMERAFAEDLGEAMEFFSELRLSQQLAKLRGEN
TQVEDNHIVVQHLSSLERDVLRDALHLVSDFKQRLSRRFHLEY
>Mature_603_residues
MIEQELNQHPFSLLSEAGRRRLQEGTDLAYFQPEDIILDAASTSDSVFVVHKGCVAELDVNAPDNRRQVNIYAAGDLFGA
ISVLNGQSRYRFLAEQQTLCHLIPARLFRELCESEPDFGHYFSQCLAEKNQRLAERREGGVTLAGFMLARVDECMRAPLI
MPERATVRDAVAALKQHGVDSVLIAHRQHYAIVTKTDLLSALVMQEQSSDTPLVQVAETELVTVAPADYLFAALTLMTRH
KVARVVVMESNNAVGVVELTDVLSFFSSRSYVVGLEIERAGTLEALQLASARLPDLVNALMAQGVKMRFVMDLLASLNGR
LMSKAYEMVVPAEHQRASLIVMGSEGRGEQILKTDQDNGLIIGDHQQWPGCDQDMQRFTRTLLSLGYPPCPGNVMVSNPE
WIGTVSRWQRRIHDWAEDPGGKGLLNLTILTDTHTVAGDSGLMETVRSTLFSRCSDDQLLMAHFARPALQFSTPLNLFGS
LKKPQHGIDIKKGALFPLIHGVRAMALQCRIQETSTLARLKKLVAAGAMERAFAEDLGEAMEFFSELRLSQQLAKLRGEN
TQVEDNHIVVQHLSSLERDVLRDALHLVSDFKQRLSRRFHLEY

Specific function: Unknown

COG id: COG2905

COG function: function code T; Predicted signal-transduction protein containing cAMP-binding and CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67199; Mature: 67199

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS50042 CNMP_BINDING_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEQELNQHPFSLLSEAGRRRLQEGTDLAYFQPEDIILDAASTSDSVFVVHKGCVAELDV
CCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEECCCEEEEEC
NAPDNRRQVNIYAAGDLFGAISVLNGQSRYRFLAEQQTLCHLIPARLFRELCESEPDFGH
CCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
YFSQCLAEKNQRLAERREGGVTLAGFMLARVDECMRAPLIMPERATVRDAVAALKQHGVD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
SVLIAHRQHYAIVTKTDLLSALVMQEQSSDTPLVQVAETELVTVAPADYLFAALTLMTRH
HHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHH
KVARVVVMESNNAVGVVELTDVLSFFSSRSYVVGLEIERAGTLEALQLASARLPDLVNAL
HHEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
MAQGVKMRFVMDLLASLNGRLMSKAYEMVVPAEHQRASLIVMGSEGRGEQILKTDQDNGL
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
IIGDHQQWPGCDQDMQRFTRTLLSLGYPPCPGNVMVSNPEWIGTVSRWQRRIHDWAEDPG
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
GKGLLNLTILTDTHTVAGDSGLMETVRSTLFSRCSDDQLLMAHFARPALQFSTPLNLFGS
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCHHHHHC
LKKPQHGIDIKKGALFPLIHGVRAMALQCRIQETSTLARLKKLVAAGAMERAFAEDLGEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEFFSELRLSQQLAKLRGENTQVEDNHIVVQHLSSLERDVLRDALHLVSDFKQRLSRRFH
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LEY
CCC
>Mature Secondary Structure
MIEQELNQHPFSLLSEAGRRRLQEGTDLAYFQPEDIILDAASTSDSVFVVHKGCVAELDV
CCCCHHCCCHHHHHHHHHHHHHHCCCCEEEECCCCEEEEECCCCCCEEEEECCCEEEEEC
NAPDNRRQVNIYAAGDLFGAISVLNGQSRYRFLAEQQTLCHLIPARLFRELCESEPDFGH
CCCCCCEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
YFSQCLAEKNQRLAERREGGVTLAGFMLARVDECMRAPLIMPERATVRDAVAALKQHGVD
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
SVLIAHRQHYAIVTKTDLLSALVMQEQSSDTPLVQVAETELVTVAPADYLFAALTLMTRH
HHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCHHHHHHHHHHHHHH
KVARVVVMESNNAVGVVELTDVLSFFSSRSYVVGLEIERAGTLEALQLASARLPDLVNAL
HHEEEEEEECCCCEEEEEHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHHHHH
MAQGVKMRFVMDLLASLNGRLMSKAYEMVVPAEHQRASLIVMGSEGRGEQILKTDQDNGL
HHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCE
IIGDHQQWPGCDQDMQRFTRTLLSLGYPPCPGNVMVSNPEWIGTVSRWQRRIHDWAEDPG
EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCC
GKGLLNLTILTDTHTVAGDSGLMETVRSTLFSRCSDDQLLMAHFARPALQFSTPLNLFGS
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHCCCCHHHHHC
LKKPQHGIDIKKGALFPLIHGVRAMALQCRIQETSTLARLKKLVAAGAMERAFAEDLGEA
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEFFSELRLSQQLAKLRGENTQVEDNHIVVQHLSSLERDVLRDALHLVSDFKQRLSRRFH
HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LEY
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA