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The map label for this gene is dctM [H]

Identifier: 110835008

GI number: 110835008

Start: 2453494

End: 2454774

Strand: Reverse

Name: dctM [H]

Synonym: ABO_2147

Alternate gene names: 110835008

Gene position: 2454774-2453494 (Counterclockwise)

Preceding gene: 110835009

Following gene: 110835006

Centisome position: 78.68

GC content: 55.58

Gene sequence:

>1281_bases
GTGTTAATCATTCTGGCTGTGATCATGCTGGTATTGCTGATGATGGGTTATCCCATGATGGTACCGCTGGCGGTGGGGAC
ATTGTTCATGATGTTCACCGGACTGACCTTTTTTGGCCCGGACCAAGCGGTGACCTGGATGGTCAATGGGGTTGGTAGCT
GGGTGCTGGCAGCGGTTCCCATGTTTATTTTTGCGGCGGATATTCTCACCAAGGGGCATACCGCCAACCGGTTGCTGGAT
CTGGTGGATGCCTTCACTCGGCATTTGCGCGGCGGCTTGCCGATTACCACTGCGGCCTCCTGTGCCGTGTTCGGTGCGGT
GTCCGGTTCTACCCAGGCCACCGTTGTCGCTATGGGCGGGCCTATGCGCCCGCGGCTGTTGGCCAAGGGTTATTCTGATA
GTTTCGCGTTGGCGCTGATTATTAACGCCAGCGATATCGCTCTGCTGATCCCGCCCAGCATCGGCTTTATTGTGTATGGC
GTGGTGATGAAAACCTCTATCGGTGACCTGTTCCTGGCCGGTATTCTGCCCGGCTTGTTGGTGCTGTTAATGTTCTCTGT
GTATTGCTGGATTGGCGCTAGAGTTAAAGGTATTGAGCCGGAAGAACGGGCTTCCTGGGGGGATCGATTGAAGGCGATGC
GCGGGGCTATCCTGCCTCTGGGCTTCCCGATTCTAGTCGTTGGCGGGATTTATGGTGGTTGGTTCAGTGCGGTCGAAGCG
TCGGCCATTGCCGTGGCGTATGCCTTGCTGCTGGAAGTGGTGATTTTCCGCAAGGTCAGTGTCAAGGATCTGGGTGGTTT
GGCGTTATCATCAGGGATGATTACCGCAGTGGTATTCATTCTGGTGGCCATTGGCGCTGCGTTTTCGCATACCTTGGGCA
CCGCCGGCATTCCCGAGAAGCTATTGGGGCCGGCCATTGAATCCATTGGCCAGAACCAAGTGGCGGCATTGGCATTGATC
GCCGTGGCGTTCTTCATTGGTTGCATGTTCGTGGATCCGATCGTGGTGATCTTGATTCTGGTGCCGATCTTCAAGCCGCT
GATCGAGTCCGCCAATCTTGATCCTATTCACGTGGGGGTTATTGTTACCCTGCAGGCGGCCATTGGTTCGGCTACGCCGC
CGTTTGGTTGCGATATCTTTACCGCCATCGCGGTATTTCGTCGCCCTTATCTGGAGGTGATTCGGGGCACGCCACCGTTT
ATCTTCATGCTGCTGATCGCCACCTTTATCCTTATTCTGTTCCCGCAGTTGTCATTGTGGTTGCCGGCCTTGGGAGGCTA
A

Upstream 100 bases:

>100_bases
TGTGCCGCTGGCCGCGGGCAGGGTGGATGATCAGGACGGCCAGCGCTAATGCATGGCCAGGCTTTTGCTGTGAGTACTGC
TGAATGAGGGGGTTGCCACT

Downstream 100 bases:

>100_bases
TCAATGCGGTCGCTTGGCGTGTTGTGATGCGACTGCGGCCGCAGAGTGGCACCAAAAAGCCCGGCTATTGGGCCGGGCAT
TTTGGTCAGCAGCTGCGCAA

Product: TRAP-type C4-dicarboxylate transport system large permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MLIILAVIMLVLLMMGYPMMVPLAVGTLFMMFTGLTFFGPDQAVTWMVNGVGSWVLAAVPMFIFAADILTKGHTANRLLD
LVDAFTRHLRGGLPITTAASCAVFGAVSGSTQATVVAMGGPMRPRLLAKGYSDSFALALIINASDIALLIPPSIGFIVYG
VVMKTSIGDLFLAGILPGLLVLLMFSVYCWIGARVKGIEPEERASWGDRLKAMRGAILPLGFPILVVGGIYGGWFSAVEA
SAIAVAYALLLEVVIFRKVSVKDLGGLALSSGMITAVVFILVAIGAAFSHTLGTAGIPEKLLGPAIESIGQNQVAALALI
AVAFFIGCMFVDPIVVILILVPIFKPLIESANLDPIHVGVIVTLQAAIGSATPPFGCDIFTAIAVFRRPYLEVIRGTPPF
IFMLLIATFILILFPQLSLWLPALGG

Sequences:

>Translated_426_residues
MLIILAVIMLVLLMMGYPMMVPLAVGTLFMMFTGLTFFGPDQAVTWMVNGVGSWVLAAVPMFIFAADILTKGHTANRLLD
LVDAFTRHLRGGLPITTAASCAVFGAVSGSTQATVVAMGGPMRPRLLAKGYSDSFALALIINASDIALLIPPSIGFIVYG
VVMKTSIGDLFLAGILPGLLVLLMFSVYCWIGARVKGIEPEERASWGDRLKAMRGAILPLGFPILVVGGIYGGWFSAVEA
SAIAVAYALLLEVVIFRKVSVKDLGGLALSSGMITAVVFILVAIGAAFSHTLGTAGIPEKLLGPAIESIGQNQVAALALI
AVAFFIGCMFVDPIVVILILVPIFKPLIESANLDPIHVGVIVTLQAAIGSATPPFGCDIFTAIAVFRRPYLEVIRGTPPF
IFMLLIATFILILFPQLSLWLPALGG
>Mature_426_residues
MLIILAVIMLVLLMMGYPMMVPLAVGTLFMMFTGLTFFGPDQAVTWMVNGVGSWVLAAVPMFIFAADILTKGHTANRLLD
LVDAFTRHLRGGLPITTAASCAVFGAVSGSTQATVVAMGGPMRPRLLAKGYSDSFALALIINASDIALLIPPSIGFIVYG
VVMKTSIGDLFLAGILPGLLVLLMFSVYCWIGARVKGIEPEERASWGDRLKAMRGAILPLGFPILVVGGIYGGWFSAVEA
SAIAVAYALLLEVVIFRKVSVKDLGGLALSSGMITAVVFILVAIGAAFSHTLGTAGIPEKLLGPAIESIGQNQVAALALI
AVAFFIGCMFVDPIVVILILVPIFKPLIESANLDPIHVGVIVTLQAAIGSATPPFGCDIFTAIAVFRRPYLEVIRGTPPF
IFMLLIATFILILFPQLSLWLPALGG

Specific function: Unknown

COG id: COG1593

COG function: function code G; TRAP-type C4-dicarboxylate transport system, large permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yiaN/ygiK family [H]

Homologues:

Organism=Escherichia coli, GI48994950, Length=418, Percent_Identity=29.4258373205742, Blast_Score=130, Evalue=2e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010656
- InterPro:   IPR004681 [H]

Pfam domain/function: PF06808 DctM [H]

EC number: NA

Molecular weight: Translated: 44948; Mature: 44948

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIILAVIMLVLLMMGYPMMVPLAVGTLFMMFTGLTFFGPDQAVTWMVNGVGSWVLAAVP
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MFIFAADILTKGHTANRLLDLVDAFTRHLRGGLPITTAASCAVFGAVSGSTQATVVAMGG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC
PMRPRLLAKGYSDSFALALIINASDIALLIPPSIGFIVYGVVMKTSIGDLFLAGILPGLL
CCCCHHHHCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLMFSVYCWIGARVKGIEPEERASWGDRLKAMRGAILPLGFPILVVGGIYGGWFSAVEA
HHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SAIAVAYALLLEVVIFRKVSVKDLGGLALSSGMITAVVFILVAIGAAFSHTLGTAGIPEK
HHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LLGPAIESIGQNQVAALALIAVAFFIGCMFVDPIVVILILVPIFKPLIESANLDPIHVGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
IVTLQAAIGSATPPFGCDIFTAIAVFRRPYLEVIRGTPPFIFMLLIATFILILFPQLSLW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LPALGG
HCCCCC
>Mature Secondary Structure
MLIILAVIMLVLLMMGYPMMVPLAVGTLFMMFTGLTFFGPDQAVTWMVNGVGSWVLAAVP
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
MFIFAADILTKGHTANRLLDLVDAFTRHLRGGLPITTAASCAVFGAVSGSTQATVVAMGG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC
PMRPRLLAKGYSDSFALALIINASDIALLIPPSIGFIVYGVVMKTSIGDLFLAGILPGLL
CCCCHHHHCCCCCCEEEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLMFSVYCWIGARVKGIEPEERASWGDRLKAMRGAILPLGFPILVVGGIYGGWFSAVEA
HHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
SAIAVAYALLLEVVIFRKVSVKDLGGLALSSGMITAVVFILVAIGAAFSHTLGTAGIPEK
HHHHHHHHHHHHHHHHHHCCHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
LLGPAIESIGQNQVAALALIAVAFFIGCMFVDPIVVILILVPIFKPLIESANLDPIHVGV
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHH
IVTLQAAIGSATPPFGCDIFTAIAVFRRPYLEVIRGTPPFIFMLLIATFILILFPQLSLW
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
LPALGG
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]