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The map label for this gene is dctQ

Identifier: 110835009

GI number: 110835009

Start: 2454826

End: 2455449

Strand: Reverse

Name: dctQ

Synonym: ABO_2148

Alternate gene names: NA

Gene position: 2455449-2454826 (Counterclockwise)

Preceding gene: 110835014

Following gene: 110835008

Centisome position: 78.7

GC content: 55.13

Gene sequence:

>624_bases
ATGCGGGAGCTATTCCGTCGTCGTGTTATAGGCTTTGTCATGATGATTGATTCCTTTCTTCTCGCACTTTCCTGGTTGGA
CCGCACTCTGGGTGTCATCGAGCGTGTCATTATCGCAGGCTGCATTTTGGTCATGGCGCTATTGATGAGCGTCCATGTGG
TCGGGCAGGCCTTATTTGATGAAGGCATACCCGGCACCTACGAGGTGGTGAAAATGCTGATTGTGGTGCTGACGTTCGTG
GGGTTGGGGTATGCCGCTCGCCACGCCCGCCATATTCGAATGTCCGCCATCTATGAGCAGCTCAATGGTAAGAGCCGCAA
AAGTCTGCAGATGATTATCTGTTTGGGCACGGCAGCGCTGATGTTCTATTTCGCGTGGAAGTCGGGCCAATATGTTTTTG
ATATTCAGGAGCGTGGCCGAGTGAGTGCCTCATTGCAGGTGCCCATGTGGCTAGTCTATCTGTCGTTGCCGGCGGGCTTT
GGCATGGCGGGGATCCAGTACATGCTGACGTTCGCCCGTAATGCGGTGTCGCCGGGTATCTGGCGGTCGTTCAACGAAAA
AGAAACTTACGAGGCTGTGCCGCTGGCCGCGGGCAGGGTGGATGATCAGGACGGCCAGCGCTAA

Upstream 100 bases:

>100_bases
TTACTTGCAGGGAAGGCCTTTACGGGGAGCCTTGCATCAGGGCAGTCTGTCAGCACAGACGCCAGTGTTTTGGTTGCCAA
AGCTCTGCCCAAGTTCCCGT

Downstream 100 bases:

>100_bases
TGCATGGCCAGGCTTTTGCTGTGAGTACTGCTGAATGAGGGGGTTGCCACTGTGTTAATCATTCTGGCTGTGATCATGCT
GGTATTGCTGATGATGGGTT

Product: TRAP-C4-dicarboxylate transport system, small permease

Products: NA

Alternate protein names: C4-Dicarboxylate Transporter Family Protein DctQ Subunit; Trap Dicarboxylate Transporter Dctq Subunit; TRAP Transporter Small Transmembrane Protein TeaB; C4-Dicarboxylate Transport System Small Permease; C4-Dicarboxylate Transport System; TRAP Dicarboxylate Transporter DctQ Subunit; TRAP-C4-Dicarboxylate Transport System Small Permease; Tripartite ATP-Independent Periplasmic Transporter

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MRELFRRRVIGFVMMIDSFLLALSWLDRTLGVIERVIIAGCILVMALLMSVHVVGQALFDEGIPGTYEVVKMLIVVLTFV
GLGYAARHARHIRMSAIYEQLNGKSRKSLQMIICLGTAALMFYFAWKSGQYVFDIQERGRVSASLQVPMWLVYLSLPAGF
GMAGIQYMLTFARNAVSPGIWRSFNEKETYEAVPLAAGRVDDQDGQR

Sequences:

>Translated_207_residues
MRELFRRRVIGFVMMIDSFLLALSWLDRTLGVIERVIIAGCILVMALLMSVHVVGQALFDEGIPGTYEVVKMLIVVLTFV
GLGYAARHARHIRMSAIYEQLNGKSRKSLQMIICLGTAALMFYFAWKSGQYVFDIQERGRVSASLQVPMWLVYLSLPAGF
GMAGIQYMLTFARNAVSPGIWRSFNEKETYEAVPLAAGRVDDQDGQR
>Mature_207_residues
MRELFRRRVIGFVMMIDSFLLALSWLDRTLGVIERVIIAGCILVMALLMSVHVVGQALFDEGIPGTYEVVKMLIVVLTFV
GLGYAARHARHIRMSAIYEQLNGKSRKSLQMIICLGTAALMFYFAWKSGQYVFDIQERGRVSASLQVPMWLVYLSLPAGF
GMAGIQYMLTFARNAVSPGIWRSFNEKETYEAVPLAAGRVDDQDGQR

Specific function: Unknown

COG id: COG3090

COG function: function code G; TRAP-type C4-dicarboxylate transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23280; Mature: 23280

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRELFRRRVIGFVMMIDSFLLALSWLDRTLGVIERVIIAGCILVMALLMSVHVVGQALFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGIPGTYEVVKMLIVVLTFVGLGYAARHARHIRMSAIYEQLNGKSRKSLQMIICLGTAAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MFYFAWKSGQYVFDIQERGRVSASLQVPMWLVYLSLPAGFGMAGIQYMLTFARNAVSPGI
HHHHHHCCCCEEEEEHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
WRSFNEKETYEAVPLAAGRVDDQDGQR
HHCCCCCHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRELFRRRVIGFVMMIDSFLLALSWLDRTLGVIERVIIAGCILVMALLMSVHVVGQALFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EGIPGTYEVVKMLIVVLTFVGLGYAARHARHIRMSAIYEQLNGKSRKSLQMIICLGTAAL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
MFYFAWKSGQYVFDIQERGRVSASLQVPMWLVYLSLPAGFGMAGIQYMLTFARNAVSPGI
HHHHHHCCCCEEEEEHHCCCCCEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHH
WRSFNEKETYEAVPLAAGRVDDQDGQR
HHCCCCCHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA