Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110835004

Identifier: 110835004

GI number: 110835004

Start: 2448828

End: 2449256

Strand: Reverse

Name: 110835004

Synonym: ABO_2143

Alternate gene names: NA

Gene position: 2449256-2448828 (Counterclockwise)

Preceding gene: 110835005

Following gene: 110835003

Centisome position: 78.5

GC content: 38.93

Gene sequence:

>429_bases
ATGGGGAAGATCAACTTTGTGGCCGGACAGGTGTTACTGAGTGCTGTTTTTATCTTTTTTTCGGCACATGCTTATGGCAG
TAGTTTCTCATGTCCGTATGGAAAAAAAGCTGCTTGCTTAAATTATGGGGATAGTGCATGTCCTTCTGATGCGAAATGTG
TAAGCCGTGATGCTGTTTGTTTTGATTCCCGTACCTGTGGTTATGATGGTTTCGTATGTAAATCAGAATACGAAGATCTA
GGCGATGAGTATGATGATTTGTTGGATGATTGCAAAGAGCTTGCTCATGAGCATGACGATATTATTGATAAATATAATAA
ATTGCTTAATAGGTATAAAAATAGGGAGTCTGAATATGAAGAGGTTGAGCTCTGCGTTCGCTATGCGACCACTCTAGAAG
AAGTAAAAAGCTGTTTTAATGCAGGTTAA

Upstream 100 bases:

>100_bases
AATGCTATAATCTGATCCTGAGGTATTTTGGCAAGGCATTCTCTTAAATGAGATGAGGTTTCGTCATTAAGGCGAGGAAT
CACGGTGGGGTGAATCAATA

Downstream 100 bases:

>100_bases
CTGGGCGTGTCAGGATGTTTATTATCCTCTGAACATTTTATAAAGAGGACATTCAAATTGTGTGTCACGGTTGACCGCCT
TTCCGGCTGATGTGGGCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 142; Mature: 141

Protein sequence:

>142_residues
MGKINFVAGQVLLSAVFIFFSAHAYGSSFSCPYGKKAACLNYGDSACPSDAKCVSRDAVCFDSRTCGYDGFVCKSEYEDL
GDEYDDLLDDCKELAHEHDDIIDKYNKLLNRYKNRESEYEEVELCVRYATTLEEVKSCFNAG

Sequences:

>Translated_142_residues
MGKINFVAGQVLLSAVFIFFSAHAYGSSFSCPYGKKAACLNYGDSACPSDAKCVSRDAVCFDSRTCGYDGFVCKSEYEDL
GDEYDDLLDDCKELAHEHDDIIDKYNKLLNRYKNRESEYEEVELCVRYATTLEEVKSCFNAG
>Mature_141_residues
GKINFVAGQVLLSAVFIFFSAHAYGSSFSCPYGKKAACLNYGDSACPSDAKCVSRDAVCFDSRTCGYDGFVCKSEYEDLG
DEYDDLLDDCKELAHEHDDIIDKYNKLLNRYKNRESEYEEVELCVRYATTLEEVKSCFNAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15936; Mature: 15805

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKINFVAGQVLLSAVFIFFSAHAYGSSFSCPYGKKAACLNYGDSACPSDAKCVSRDAVC
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCHH
FDSRTCGYDGFVCKSEYEDLGDEYDDLLDDCKELAHEHDDIIDKYNKLLNRYKNRESEYE
CCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EVELCVRYATTLEEVKSCFNAG
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKINFVAGQVLLSAVFIFFSAHAYGSSFSCPYGKKAACLNYGDSACPSDAKCVSRDAVC
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCHHHHHCCCHH
FDSRTCGYDGFVCKSEYEDLGDEYDDLLDDCKELAHEHDDIIDKYNKLLNRYKNRESEYE
CCCCCCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
EVELCVRYATTLEEVKSCFNAG
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA