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The map label for this gene is mmgC [H]

Identifier: 110834963

GI number: 110834963

Start: 2407577

End: 2409373

Strand: Reverse

Name: mmgC [H]

Synonym: ABO_2102

Alternate gene names: 110834963

Gene position: 2409373-2407577 (Counterclockwise)

Preceding gene: 110834967

Following gene: 110834962

Centisome position: 77.22

GC content: 55.98

Gene sequence:

>1797_bases
ATGCCGGATTACAAGGCTCCCCTGCGCGACATGCGCTTTGTACTGAATGAAGTGCTCGACCTGGATGGCCACTACGCCAG
CCTGGGTTTGGACGATATCAATAGCGAACTGCTGAATGCTTTCCTGGAAGAAGGCGCCAAGTTTTCTGAAAACGAACTGG
CTCCTCTAAACCGTTCCGGTGATGAGGAAGGCTGTGGTTTCGAAAATGGTGTGGTGACCACGCCGAAAGGCTTTAAAGAA
GCCTACGTCAAATACGTAGAGGGTGGCTGGCCGGCCATGGGTGGCGATCCTGAGTTCGGGGGCCAAGGCCTGCCGGGTTC
TGCCGGTATCGCGATATCAGAAATGACCGGTTCTGCCAACTGGTCCTGGAGCATGTACCCGGGCCTGTCCCATGGTGCGG
TTGCCACCATTGAAGAACACGGCACTGAAGAGCAGAAACAAGGGTACTTGCCCAAGCTAACCAGTGGTGAGTGGACCGGC
ACTATGTGTCTGACTGAGCCTAGCTGTGGTTCTGACCTAGGCATTCTCAAAACCAAGGCCGAGCCTAACGACGACGGATC
CTACAGCATCACCGGCACCAAGATCTTCATCTCCGCCGGTGAGCATGACATGGCTGAGAACATCATCCATATCGTCCTGG
CTCGCCTGCCGGGTGCTCCGAAAGGCACCAAGGGCATTTCCCTGTTCATCGTGCCCAAGTTCATGACTGACGGTAACGGC
AGCGTGGGTGAGCGCAATGCGGTGACCTGTGGTTCCATCGAACACAAGATGGGTATTAAGGCTTCTGCTACCTGTGTAAT
GAACTTCGACGGTGCGACTGGTTACCTGATCGGTCCGGAGAACAAAGGTTTGAACTGCATGTTCACCTTCATGAACTTCG
CTCGCCTGGGTACTGCTATTCAAGGTGTTGCGCACGCTGAAATTGGTTTCCAGGGCGGGCTGACCTACGCCAAGGAACGT
TTGGCCATGCGTAGTCTGTCTGGACCTAAGAACCCGGAAGGCCCGGCTGACCCGATCATCGTTCACCCAGATGTGCGTCG
CATGCTGCTGACCTCCAAGGCATTCGCCGAAGGTGGCCGTGCACTGGTTTACCTGTGTGCCCAGCTGGGCGACAAGGTGA
AGCTGGAGAAGGACGAAGCGGCCCGTAAAGAAGCCGACGAACTGATGGCGCTGCTGACACCGATCGCCAAAGCGTTTGTG
ACCGAAACAGGCCTGGAAGCTGCTAACCACGGTGTGCAGATCTACGGTGGTCACGGCTTTATTCGTGAGTGGGGCATGGA
GCAGAACGTTCGTGATGCCCGTATCTCTACTCTGTACGAAGGCACCACCGGTATTCAGGCGCTGGATTTGTTGGGCCGTA
AGGTGTTGATGACCCAGGGCCAGGCCCTGCGTAACTTCACCAAGATTGTGCACCAGTTCTGTGAAGCCAATGGTGAGAAT
GGCGACCTTAAAGAATTTGTTGAGCCGCTGGCCGGCTACAACAAGGAATGGGGCGAGCTGACTCAAGCCATCGGCATGCA
GGCCATGCAGAATCCGGAATACGTGGGCGCCGCCTCGGTGGATTACCTGATGTACTCTGGTTACGTGACGCTGGCCTATC
TGTGGGCGCGCATGGCATCTGTCGCGCAAGCCCAGCTAGATGCTGGTGCTGGTGATGAGGACTTCTACAAAGCCAAGATC
AGTACTGCGCGTTTCTACTTCAAGCGCATCCTGCCGCGCGTGGCTGGCCATAAAGGCGCTATCGAAGGTGGTTTGGACTG
CATGATGGACCTGGATGCCGAGCACTTCGCATTCTAA

Upstream 100 bases:

>100_bases
GTGGAGACGTGCCGGAAGCCTGACCTAAGATTAGCCCACTTAAAAGAGTGGCGAGCCACGGCCCGCCTCATTGTTACCGG
TAATTTAAGGGAGATTTGAG

Downstream 100 bases:

>100_bases
GTCTCTCCTGCTGATAAAAAACCCGCCTTTATGGCGGGTTTTTTTTGGCTGCTTGACCGCTGGTTGAGGCAGAGAGCATG
CCGTAGGGTGCGTTGGGTTT

Product: acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MPDYKAPLRDMRFVLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSENELAPLNRSGDEEGCGFENGVVTTPKGFKE
AYVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSANWSWSMYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTG
TMCLTEPSCGSDLGILKTKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTDGNG
SVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAIQGVAHAEIGFQGGLTYAKER
LAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAEGGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFV
TETGLEAANHGVQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEANGEN
GDLKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMASVAQAQLDAGAGDEDFYKAKI
STARFYFKRILPRVAGHKGAIEGGLDCMMDLDAEHFAF

Sequences:

>Translated_598_residues
MPDYKAPLRDMRFVLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSENELAPLNRSGDEEGCGFENGVVTTPKGFKE
AYVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSANWSWSMYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTG
TMCLTEPSCGSDLGILKTKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTDGNG
SVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAIQGVAHAEIGFQGGLTYAKER
LAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAEGGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFV
TETGLEAANHGVQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEANGEN
GDLKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMASVAQAQLDAGAGDEDFYKAKI
STARFYFKRILPRVAGHKGAIEGGLDCMMDLDAEHFAF
>Mature_597_residues
PDYKAPLRDMRFVLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSENELAPLNRSGDEEGCGFENGVVTTPKGFKEA
YVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSANWSWSMYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTGT
MCLTEPSCGSDLGILKTKAEPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTDGNGS
VGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAIQGVAHAEIGFQGGLTYAKERL
AMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAEGGRALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVT
ETGLEAANHGVQIYGGHGFIREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEANGENG
DLKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMASVAQAQLDAGAGDEDFYKAKIS
TARFYFKRILPRVAGHKGAIEGGLDCMMDLDAEHFAF

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501859, Length=413, Percent_Identity=27.1186440677966, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI4557233, Length=434, Percent_Identity=28.8018433179723, Blast_Score=115, Evalue=1e-25,
Organism=Homo sapiens, GI76496475, Length=417, Percent_Identity=28.537170263789, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI4557235, Length=417, Percent_Identity=28.537170263789, Blast_Score=110, Evalue=4e-24,
Organism=Homo sapiens, GI4501857, Length=439, Percent_Identity=25.9681093394077, Blast_Score=109, Evalue=7e-24,
Organism=Homo sapiens, GI7656849, Length=368, Percent_Identity=28.2608695652174, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI226958412, Length=434, Percent_Identity=26.2672811059908, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI21361497, Length=440, Percent_Identity=23.8636363636364, Blast_Score=92, Evalue=2e-18,
Organism=Homo sapiens, GI226958414, Length=365, Percent_Identity=26.5753424657534, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI4557231, Length=318, Percent_Identity=27.3584905660377, Blast_Score=83, Evalue=7e-16,
Organism=Homo sapiens, GI187960098, Length=318, Percent_Identity=27.3584905660377, Blast_Score=83, Evalue=9e-16,
Organism=Homo sapiens, GI4503943, Length=326, Percent_Identity=27.6073619631902, Blast_Score=75, Evalue=2e-13,
Organism=Escherichia coli, GI87082384, Length=321, Percent_Identity=27.4143302180685, Blast_Score=116, Evalue=5e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=430, Percent_Identity=27.4418604651163, Blast_Score=121, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17506239, Length=412, Percent_Identity=27.4271844660194, Blast_Score=110, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17569725, Length=336, Percent_Identity=29.7619047619048, Blast_Score=106, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71985184, Length=363, Percent_Identity=29.2011019283747, Blast_Score=105, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=339, Percent_Identity=29.7935103244838, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI86563381, Length=387, Percent_Identity=25.0645994832041, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI86563383, Length=387, Percent_Identity=25.0645994832041, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17538396, Length=440, Percent_Identity=24.0909090909091, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17533517, Length=419, Percent_Identity=25.0596658711217, Blast_Score=94, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI71990804, Length=239, Percent_Identity=30.1255230125523, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=229, Percent_Identity=30.5676855895196, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71985192, Length=210, Percent_Identity=33.3333333333333, Blast_Score=80, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=324, Percent_Identity=25.6172839506173, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666513, Length=411, Percent_Identity=28.2238442822384, Blast_Score=117, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24646207, Length=405, Percent_Identity=26.9135802469136, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356377, Length=374, Percent_Identity=29.144385026738, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21355753, Length=443, Percent_Identity=27.765237020316, Blast_Score=101, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=328, Percent_Identity=30.1829268292683, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281363737, Length=361, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 64514; Mature: 64383

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDYKAPLRDMRFVLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSENELAPLNRSG
CCCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DEEGCGFENGVVTTPKGFKEAYVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSAN
CCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
WSWSMYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTGTMCLTEPSCGSDLGILKTKA
CEEEECCCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECC
EPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTDGNG
CCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAI
CCCCCCCEEECCCHHHCCCCEEEEEEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHHHH
QGVAHAEIGFQGGLTYAKERLAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAEGGR
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCH
ALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVTETGLEAANHGVQIYGGHGF
HHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCH
IREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEANGEN
HHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
GDLKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMAS
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAQAQLDAGAGDEDFYKAKISTARFYFKRILPRVAGHKGAIEGGLDCMMDLDAEHFAF
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHHCC
>Mature Secondary Structure 
PDYKAPLRDMRFVLNEVLDLDGHYASLGLDDINSELLNAFLEEGAKFSENELAPLNRSG
CCCCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DEEGCGFENGVVTTPKGFKEAYVKYVEGGWPAMGGDPEFGGQGLPGSAGIAISEMTGSAN
CCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCC
WSWSMYPGLSHGAVATIEEHGTEEQKQGYLPKLTSGEWTGTMCLTEPSCGSDLGILKTKA
CEEEECCCCCCCCEEEHHHCCCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECC
EPNDDGSYSITGTKIFISAGEHDMAENIIHIVLARLPGAPKGTKGISLFIVPKFMTDGNG
CCCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCCC
SVGERNAVTCGSIEHKMGIKASATCVMNFDGATGYLIGPENKGLNCMFTFMNFARLGTAI
CCCCCCCEEECCCHHHCCCCEEEEEEEEECCCCEEEECCCCCCCEEHHHHHHHHHHHHHH
QGVAHAEIGFQGGLTYAKERLAMRSLSGPKNPEGPADPIIVHPDVRRMLLTSKAFAEGGR
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHCCCH
ALVYLCAQLGDKVKLEKDEAARKEADELMALLTPIAKAFVTETGLEAANHGVQIYGGHGF
HHHHHHHHHCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCH
IREWGMEQNVRDARISTLYEGTTGIQALDLLGRKVLMTQGQALRNFTKIVHQFCEANGEN
HHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
GDLKEFVEPLAGYNKEWGELTQAIGMQAMQNPEYVGAASVDYLMYSGYVTLAYLWARMAS
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VAQAQLDAGAGDEDFYKAKISTARFYFKRILPRVAGHKGAIEGGLDCMMDLDAEHFAF
HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]