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The map label for this gene is yegD [H]

Identifier: 110834945

GI number: 110834945

Start: 2372666

End: 2374195

Strand: Reverse

Name: yegD [H]

Synonym: ABO_2084

Alternate gene names: 110834945

Gene position: 2374195-2372666 (Counterclockwise)

Preceding gene: 110834946

Following gene: 110834943

Centisome position: 76.09

GC content: 49.22

Gene sequence:

>1530_bases
ATGAAGATCGGTTTTGACTTTGGTACCAGCTTTTCAGCATTGGCAGTCTATCGGGATGGTGAGATTCACCGAATCATGTT
TGATGGTGAGCCGCAATTTCGTACAGCAATCTACTTTCCTCCTTATGCACCAAGTGCAGATTTTTTTAATGCTGATGATC
ACCAAACCGAAATAGCCTCTATTCGTTCAGCCCTAATTCGCTCAGAGACGGAGGCCAAAGAAAATTACAGTGACAGGGTG
AGAGAAGAAAGAGTCAGGGTTACTAGCCAAGCCAGGAATGATCCTGCTGGTTATAACGCGGATAGACAGCTGTCTGCGAA
GTATCAAAGGATGTTGAGCGACGCAATTATCCGTATTCCTGAGCCTGTAGAAACGACGCGAGCAGATAAGGATAAGCAGG
CAATTGAAACAGCCCGCAGACAATGGCTTGAATCAGAAGCAGGTAAAGACCGCGTTCTTGGGAATCTGGAGGAAAGCCAG
CTTGAAGGCGCGTTGTTTGGCAATGAGGCAGTTGATGCCTACCTGAATAATGATCGCAAGGGACTTTTGCTCTACAACCC
TAAGGCTTTTCTTGCTCATGATTTGTCTTCCAGGCTCTCGGCACCTCTGGAAAGGGCGATTGGCAGCTTGTTCAGGAAGG
TTGTTGGTGCCGTAGAAGAGCAATTTCAGGGAGAGCAAGTAACAGGGGTTGTTATCGGGCGTCCCGTTAACTTCGGGAAA
AAGCAGAGTGATGTGGAAAATGATCGGGCTATTTCGATTATTACCCATGCAGCTGAGCTTGCCGGCATGTCCAATGTTTC
TTTCATGTATGAGCCTAGTGCTGCGTCCTACCAATTCCACGTTTCTCAAGATACTCCTCGTAAGGTTCTGGTGGTTGATC
TAGGCGGTGGTACGGCGGATTTGTCGTTAGTGACCCTTGGCGGTGCTGAGCCCGCTCCAATTCCTCATCGGCAGCAGGGC
TATCTGCTAGGGGGGAATGACGTAGATCGTGAGCTCAACAAGAAGGGGTATATGCCCTTCTTTGGAAAGGGCCAGGAGGT
GAGGGGCATCCCTGCGTTGAACTCCTATTTCGCCTATGCCGCTAACGTTCAGCATATCGAATACCAGAAAAAATTTATTG
AGGCGGATCTTCGCCTAGTGCCGGAGCCATTCAGGGAGCGCCTGAATCACCTCAAAAAATCCGGTAATACCATTCGATTA
AACAGGTTGGCCGAAGAGAGCAAGATTGAGCTGGGGCGGCAGGAAAGTCGCAGCCGAAAGGTGATCGACTTTATCGGTGA
AGAGCGTGGGGTCGATATTGATGGCGCTATCTATGCTGATGCGATGGCTCGATATCTAGAGAAGCTCAAGGTTCTGCTGC
AGGAGTTTTCTGATGAAGACTTCGATATGGTGTCTCTTACGGGCGGTATGAGCCGTGCAAAAGGCGTCAAGGAACTGGTC
GAAAGGGTTTTTCCAGACAAGGATGTTCAGAGCTCAGAGTCTACCCTTGATGTTGTCTCGGGGTTGGCGATTTACGCAGC
TCAGCAATAA

Upstream 100 bases:

>100_bases
CACCCAGTGGGCCGTGGAAGGAACTGGCAAGACCTATGGAGATTGGCAGGATGAGCAAGTGTCGGCTAGTACAGGGCAGG
GTTTGGATTAAGGAATAACA

Downstream 100 bases:

>100_bases
TTTAGGGGAAGTGATAATTGCTGGCAGCCGAGAAGCACTTCTTCAGCTGTACATCATCGACTAGATGATGCCAGCGGGAT
GGCTAACCGGCCCGGCCCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 509; Mature: 509

Protein sequence:

>509_residues
MKIGFDFGTSFSALAVYRDGEIHRIMFDGEPQFRTAIYFPPYAPSADFFNADDHQTEIASIRSALIRSETEAKENYSDRV
REERVRVTSQARNDPAGYNADRQLSAKYQRMLSDAIIRIPEPVETTRADKDKQAIETARRQWLESEAGKDRVLGNLEESQ
LEGALFGNEAVDAYLNNDRKGLLLYNPKAFLAHDLSSRLSAPLERAIGSLFRKVVGAVEEQFQGEQVTGVVIGRPVNFGK
KQSDVENDRAISIITHAAELAGMSNVSFMYEPSAASYQFHVSQDTPRKVLVVDLGGGTADLSLVTLGGAEPAPIPHRQQG
YLLGGNDVDRELNKKGYMPFFGKGQEVRGIPALNSYFAYAANVQHIEYQKKFIEADLRLVPEPFRERLNHLKKSGNTIRL
NRLAEESKIELGRQESRSRKVIDFIGEERGVDIDGAIYADAMARYLEKLKVLLQEFSDEDFDMVSLTGGMSRAKGVKELV
ERVFPDKDVQSSESTLDVVSGLAIYAAQQ

Sequences:

>Translated_509_residues
MKIGFDFGTSFSALAVYRDGEIHRIMFDGEPQFRTAIYFPPYAPSADFFNADDHQTEIASIRSALIRSETEAKENYSDRV
REERVRVTSQARNDPAGYNADRQLSAKYQRMLSDAIIRIPEPVETTRADKDKQAIETARRQWLESEAGKDRVLGNLEESQ
LEGALFGNEAVDAYLNNDRKGLLLYNPKAFLAHDLSSRLSAPLERAIGSLFRKVVGAVEEQFQGEQVTGVVIGRPVNFGK
KQSDVENDRAISIITHAAELAGMSNVSFMYEPSAASYQFHVSQDTPRKVLVVDLGGGTADLSLVTLGGAEPAPIPHRQQG
YLLGGNDVDRELNKKGYMPFFGKGQEVRGIPALNSYFAYAANVQHIEYQKKFIEADLRLVPEPFRERLNHLKKSGNTIRL
NRLAEESKIELGRQESRSRKVIDFIGEERGVDIDGAIYADAMARYLEKLKVLLQEFSDEDFDMVSLTGGMSRAKGVKELV
ERVFPDKDVQSSESTLDVVSGLAIYAAQQ
>Mature_509_residues
MKIGFDFGTSFSALAVYRDGEIHRIMFDGEPQFRTAIYFPPYAPSADFFNADDHQTEIASIRSALIRSETEAKENYSDRV
REERVRVTSQARNDPAGYNADRQLSAKYQRMLSDAIIRIPEPVETTRADKDKQAIETARRQWLESEAGKDRVLGNLEESQ
LEGALFGNEAVDAYLNNDRKGLLLYNPKAFLAHDLSSRLSAPLERAIGSLFRKVVGAVEEQFQGEQVTGVVIGRPVNFGK
KQSDVENDRAISIITHAAELAGMSNVSFMYEPSAASYQFHVSQDTPRKVLVVDLGGGTADLSLVTLGGAEPAPIPHRQQG
YLLGGNDVDRELNKKGYMPFFGKGQEVRGIPALNSYFAYAANVQHIEYQKKFIEADLRLVPEPFRERLNHLKKSGNTIRL
NRLAEESKIELGRQESRSRKVIDFIGEERGVDIDGAIYADAMARYLEKLKVLLQEFSDEDFDMVSLTGGMSRAKGVKELV
ERVFPDKDVQSSESTLDVVSGLAIYAAQQ

Specific function: Unknown

COG id: COG0443

COG function: function code O; Molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heat shock protein 70 family [H]

Homologues:

Organism=Escherichia coli, GI87082035, Length=368, Percent_Identity=30.7065217391304, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018181
- InterPro:   IPR001023
- InterPro:   IPR013126 [H]

Pfam domain/function: PF00012 HSP70 [H]

EC number: NA

Molecular weight: Translated: 56821; Mature: 56821

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS00329 HSP70_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIGFDFGTSFSALAVYRDGEIHRIMFDGEPQFRTAIYFPPYAPSADFFNADDHQTEIAS
CEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
IRSALIRSETEAKENYSDRVREERVRVTSQARNDPAGYNADRQLSAKYQRMLSDAIIRIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECC
EPVETTRADKDKQAIETARRQWLESEAGKDRVLGNLEESQLEGALFGNEAVDAYLNNDRK
CCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCHHHHHHHCCCCC
GLLLYNPKAFLAHDLSSRLSAPLERAIGSLFRKVVGAVEEQFQGEQVTGVVIGRPVNFGK
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
KQSDVENDRAISIITHAAELAGMSNVSFMYEPSAASYQFHVSQDTPRKVLVVDLGGGTAD
CCCCCCCCCEEEHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCE
LSLVTLGGAEPAPIPHRQQGYLLGGNDVDRELNKKGYMPFFGKGQEVRGIPALNSYFAYA
EEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ANVQHIEYQKKFIEADLRLVPEPFRERLNHLKKSGNTIRLNRLAEESKIELGRQESRSRK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHH
VIDFIGEERGVDIDGAIYADAMARYLEKLKVLLQEFSDEDFDMVSLTGGMSRAKGVKELV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
ERVFPDKDVQSSESTLDVVSGLAIYAAQQ
HHHCCCCCCCCCHHHHHHHHHHHHEEECC
>Mature Secondary Structure
MKIGFDFGTSFSALAVYRDGEIHRIMFDGEPQFRTAIYFPPYAPSADFFNADDHQTEIAS
CEECCCCCCCCEEEEEEECCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHH
IRSALIRSETEAKENYSDRVREERVRVTSQARNDPAGYNADRQLSAKYQRMLSDAIIRIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHEECC
EPVETTRADKDKQAIETARRQWLESEAGKDRVLGNLEESQLEGALFGNEAVDAYLNNDRK
CCHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHCCCCCCCHHHHHHHCCCCC
GLLLYNPKAFLAHDLSSRLSAPLERAIGSLFRKVVGAVEEQFQGEQVTGVVIGRPVNFGK
EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCC
KQSDVENDRAISIITHAAELAGMSNVSFMYEPSAASYQFHVSQDTPRKVLVVDLGGGTAD
CCCCCCCCCEEEHHHHHHHHCCCCCCEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCE
LSLVTLGGAEPAPIPHRQQGYLLGGNDVDRELNKKGYMPFFGKGQEVRGIPALNSYFAYA
EEEEEECCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
ANVQHIEYQKKFIEADLRLVPEPFRERLNHLKKSGNTIRLNRLAEESKIELGRQESRSRK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHCCHHHHHHHH
VIDFIGEERGVDIDGAIYADAMARYLEKLKVLLQEFSDEDFDMVSLTGGMSRAKGVKELV
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHH
ERVFPDKDVQSSESTLDVVSGLAIYAAQQ
HHHCCCCCCCCCHHHHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 6094528; 7940673; 7984428 [H]