| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is folB [H]
Identifier: 110834918
GI number: 110834918
Start: 2344762
End: 2345178
Strand: Reverse
Name: folB [H]
Synonym: ABO_2057
Alternate gene names: 110834918
Gene position: 2345178-2344762 (Counterclockwise)
Preceding gene: 110834920
Following gene: 110834917
Centisome position: 75.16
GC content: 51.8
Gene sequence:
>417_bases ATGGGATTCATCCAGTGCGCTAGCGTCGATGAATGCCACGGCAAGAGAGCCAGTATGGATATTGTTTATATCAATGATTT GAAAGTGGATACGGTAATCGGCATTTTCGATTGGGAGCGTCGCATCCGCCAGACCGTGAGTCTGGATCTGGAAATGGCGG CAGATATTTGCAAAGGAGCGGCCTCGGATCACATTGATGATGCATTGGATTACAAAGCCATTGGCAAGCGGTTGATCACC TTTATTGAAGGCAGTGAATTTCAGTTGGTGGAAACTCTGGCGGAGAATGTGGCGCAGCTGGTGTTGAATGAGTTCAGTGT GCCGTGGCTAAAATTGCGACTCAGCAAGCCGGGCGCTTTGCGCGGCGCCCGTGATGTGGGGGTGATCATTGAGCGGGGTG TGCGTCCCAATGCCTGA
Upstream 100 bases:
>100_bases GCTGAGGCAGCGAAATTGGCACCCAAGTAGTGCTTTGGGGCCATTGTACACAGCATCCCATTGCTGCCTGAGCTGCAAGC GTAACATCTGATTACCTGAA
Downstream 100 bases:
>100_bases CGTGTCTCAGGCTCAGGTATTTCTAAGCCTGGGCTCCAATATCGACCGTGAGCACAATATTAGCTCTGGGTTAGATGCCC TAAAGCGGGCATTTTCCCCC
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MGFIQCASVDECHGKRASMDIVYINDLKVDTVIGIFDWERRIRQTVSLDLEMAADICKGAASDHIDDALDYKAIGKRLIT FIEGSEFQLVETLAENVAQLVLNEFSVPWLKLRLSKPGALRGARDVGVIIERGVRPNA
Sequences:
>Translated_138_residues MGFIQCASVDECHGKRASMDIVYINDLKVDTVIGIFDWERRIRQTVSLDLEMAADICKGAASDHIDDALDYKAIGKRLIT FIEGSEFQLVETLAENVAQLVLNEFSVPWLKLRLSKPGALRGARDVGVIIERGVRPNA >Mature_137_residues GFIQCASVDECHGKRASMDIVYINDLKVDTVIGIFDWERRIRQTVSLDLEMAADICKGAASDHIDDALDYKAIGKRLITF IEGSEFQLVETLAENVAQLVLNEFSVPWLKLRLSKPGALRGARDVGVIIERGVRPNA
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=115, Percent_Identity=50.4347826086956, Blast_Score=120, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 15333; Mature: 15202
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFIQCASVDECHGKRASMDIVYINDLKVDTVIGIFDWERRIRQTVSLDLEMAADICKGA CCCEECCCCHHHCCCCCCEEEEEECCCCEEHEEEHHHHHHHHHHHHCCHHHHHHHHHCCC ASDHIDDALDYKAIGKRLITFIEGSEFQLVETLAENVAQLVLNEFSVPWLKLRLSKPGAL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC RGARDVGVIIERGVRPNA CCCCHHHHHHCCCCCCCC >Mature Secondary Structure GFIQCASVDECHGKRASMDIVYINDLKVDTVIGIFDWERRIRQTVSLDLEMAADICKGA CCEECCCCHHHCCCCCCEEEEEECCCCEEHEEEHHHHHHHHHHHHCCHHHHHHHHHCCC ASDHIDDALDYKAIGKRLITFIEGSEFQLVETLAENVAQLVLNEFSVPWLKLRLSKPGAL CCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC RGARDVGVIIERGVRPNA CCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]