| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is trpE [H]
Identifier: 110834888
GI number: 110834888
Start: 2315386
End: 2316876
Strand: Reverse
Name: trpE [H]
Synonym: ABO_2027
Alternate gene names: 110834888
Gene position: 2316876-2315386 (Counterclockwise)
Preceding gene: 110834892
Following gene: 110834887
Centisome position: 74.26
GC content: 59.36
Gene sequence:
>1491_bases ATGTCACCACAAGAACTGGATCGTTTTGCCCAGCAGGGCTATACCCGGGTGCCCGTGGTTCGCGAAGTATTGGCGGATTT GGATACGCCGCTGTCGGCCTATCGTAAGCTGGCGTCTGGCCCCTACACCTACCTGTTTGAATCGGTGCAGGGGGGCGAAC GGTGGGGCCGGTATTCCATTATTGGCCTGCCGGCCACAGAGGTGGTGCGGATTACTGGCCAGCAGGTGCAGGTCGATGGC CCAGAGGGGCGTCAGCATTACGAAGCGGCTGACCCTATTAGCTGGGTGGAAGAGTATCGAAAAGCCTATCGTAGCCCAGA CTTGGAGGGCTTGCCCCGTTTTAATGGCGGCCTGGTGGGGTATTTCGGTTATGACAGCGTGCGGTATTTCGAGCCACGTT TGGGGCCTGCACCTGGCGAGGATGTGCTGGGGGTTCCGGATATCCTGCTGATGCGGTCCGAGGAGGTGGTGGTCTTCGAT AACCTGCGCGGGGCGCTGTTCCTGGTGGTGCATGTGGACCCGAAAGAAGACGGGGTACTGATGCGCGCCGAGCAGCGGCT AGAGGCGTTGGAAAGCCAGCTGCGCGCTCCCTTGTCGGAGCCGGCACATACCGTTTACGGCGAGCCTGTGGACGAAAACG ATTTCCACCATGAATTTCCGCAAGACGCTTTCAAGGCGGGTGTGGAAACCATCCGCGAGTACATCCTGGCGGGGGACGTG ATGCAGGTGGTGCCGTCCCAGCGCATGAGTTGTCCGTTTCAGGCGCCGGCGCTGGATTTGTATCGTGCCCTGCGTTACCT GAATCCGTCGCCTTACATGTTCTATCTGGATCTGGACGATTTTCATATCGCCGGCTCTTCGCCGGAAATTCTGGCTCGCG CTGAGCAGGGGCGAACGACGGTGCGGCCACTGGCGGGCACGCGCAAACGCGGTGCCAATGAAGCGGAAGATTTGGCGCTG GAAAAAGACTTGCTGGCGGACCCGAAGGAAATTGCCGAGCACCTGATGCTGATTGATTTGGGGCGCAACGATATTGGCCG TGTTTCTAAGGCGGGCAAGGTGGAGGTTTCCGACCAGATGGTCGTGGAGCGTTATTCCCACGTGATGCATATTGTGTCCA ATGTGGACGGCGAGCTACGCGAAGATTTGGGGCCGCTGGATGTGCTGCGTGCCACCTTCCCGGCGGGCACCCTGAGCGGT GCGCCGAAGATCCGCGCTATGGAAATCATTGACGAACTGGAGCCCACCAAGCGCGGCGTCTACGGGGGCGCAGTGGGGTA TATCGGTTTTAACGGCGATATGGACACGGCTATCGCTATCCGTACTGCAGTGATCAAGGATCAACGCCTGTACGTGCAGG CTGGGGCAGGGATTGTGGCCGACTCCGTGCCGCAGTCTGAATGGGACGAGACCATGAATAAAGCCCGGGCAGTATTCCGA GCGGTAAACATGGCATTGGGTGGTCTCAACCTGGCAGACGGAGGACAGTAA
Upstream 100 bases:
>100_bases TCTGTACTGACACGTCTTTTGATTATTTTTCCTCTACAATTATTGCTCTAGATCGCGGTCCGCCTAAGTGCTGGGCCGTA GCGAAATGCTAAGGACAATT
Downstream 100 bases:
>100_bases TAATGCGCGTGCTGATGATCGATAATTACGACAGTTTTACCTACAACCTGGTGCAGTACCTACAGGAGCTGGGTGCTGAG GTGCTGGTGCACCGCAACGA
Product: anthranilate synthase, component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MSPQELDRFAQQGYTRVPVVREVLADLDTPLSAYRKLASGPYTYLFESVQGGERWGRYSIIGLPATEVVRITGQQVQVDG PEGRQHYEAADPISWVEEYRKAYRSPDLEGLPRFNGGLVGYFGYDSVRYFEPRLGPAPGEDVLGVPDILLMRSEEVVVFD NLRGALFLVVHVDPKEDGVLMRAEQRLEALESQLRAPLSEPAHTVYGEPVDENDFHHEFPQDAFKAGVETIREYILAGDV MQVVPSQRMSCPFQAPALDLYRALRYLNPSPYMFYLDLDDFHIAGSSPEILARAEQGRTTVRPLAGTRKRGANEAEDLAL EKDLLADPKEIAEHLMLIDLGRNDIGRVSKAGKVEVSDQMVVERYSHVMHIVSNVDGELREDLGPLDVLRATFPAGTLSG APKIRAMEIIDELEPTKRGVYGGAVGYIGFNGDMDTAIAIRTAVIKDQRLYVQAGAGIVADSVPQSEWDETMNKARAVFR AVNMALGGLNLADGGQ
Sequences:
>Translated_496_residues MSPQELDRFAQQGYTRVPVVREVLADLDTPLSAYRKLASGPYTYLFESVQGGERWGRYSIIGLPATEVVRITGQQVQVDG PEGRQHYEAADPISWVEEYRKAYRSPDLEGLPRFNGGLVGYFGYDSVRYFEPRLGPAPGEDVLGVPDILLMRSEEVVVFD NLRGALFLVVHVDPKEDGVLMRAEQRLEALESQLRAPLSEPAHTVYGEPVDENDFHHEFPQDAFKAGVETIREYILAGDV MQVVPSQRMSCPFQAPALDLYRALRYLNPSPYMFYLDLDDFHIAGSSPEILARAEQGRTTVRPLAGTRKRGANEAEDLAL EKDLLADPKEIAEHLMLIDLGRNDIGRVSKAGKVEVSDQMVVERYSHVMHIVSNVDGELREDLGPLDVLRATFPAGTLSG APKIRAMEIIDELEPTKRGVYGGAVGYIGFNGDMDTAIAIRTAVIKDQRLYVQAGAGIVADSVPQSEWDETMNKARAVFR AVNMALGGLNLADGGQ >Mature_495_residues SPQELDRFAQQGYTRVPVVREVLADLDTPLSAYRKLASGPYTYLFESVQGGERWGRYSIIGLPATEVVRITGQQVQVDGP EGRQHYEAADPISWVEEYRKAYRSPDLEGLPRFNGGLVGYFGYDSVRYFEPRLGPAPGEDVLGVPDILLMRSEEVVVFDN LRGALFLVVHVDPKEDGVLMRAEQRLEALESQLRAPLSEPAHTVYGEPVDENDFHHEFPQDAFKAGVETIREYILAGDVM QVVPSQRMSCPFQAPALDLYRALRYLNPSPYMFYLDLDDFHIAGSSPEILARAEQGRTTVRPLAGTRKRGANEAEDLALE KDLLADPKEIAEHLMLIDLGRNDIGRVSKAGKVEVSDQMVVERYSHVMHIVSNVDGELREDLGPLDVLRATFPAGTLSGA PKIRAMEIIDELEPTKRGVYGGAVGYIGFNGDMDTAIAIRTAVIKDQRLYVQAGAGIVADSVPQSEWDETMNKARAVFRA VNMALGGLNLADGGQ
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=383, Percent_Identity=42.5587467362924, Blast_Score=258, Evalue=9e-70, Organism=Escherichia coli, GI1788114, Length=470, Percent_Identity=31.9148936170213, Blast_Score=228, Evalue=5e-61, Organism=Escherichia coli, GI1786809, Length=205, Percent_Identity=31.7073170731707, Blast_Score=98, Evalue=1e-21, Organism=Escherichia coli, GI87082077, Length=264, Percent_Identity=28.030303030303, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6320935, Length=471, Percent_Identity=39.2781316348195, Blast_Score=309, Evalue=8e-85, Organism=Saccharomyces cerevisiae, GI6324361, Length=401, Percent_Identity=25.6857855361596, Blast_Score=103, Evalue=5e-23,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 54866; Mature: 54735
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPQELDRFAQQGYTRVPVVREVLADLDTPLSAYRKLASGPYTYLFESVQGGERWGRYSI CCHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE IGLPATEVVRITGQQVQVDGPEGRQHYEAADPISWVEEYRKAYRSPDLEGLPRFNGGLVG EECCHHHEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE YFGYDSVRYFEPRLGPAPGEDVLGVPDILLMRSEEVVVFDNLRGALFLVVHVDPKEDGVL EECCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCEE MRAEQRLEALESQLRAPLSEPAHTVYGEPVDENDFHHEFPQDAFKAGVETIREYILAGDV HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQVVPSQRMSCPFQAPALDLYRALRYLNPSPYMFYLDLDDFHIAGSSPEILARAEQGRTT HHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCE VRPLAGTRKRGANEAEDLALEKDLLADPKEIAEHLMLIDLGRNDIGRVSKAGKVEVSDQM ECCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCHHHCCCCCCEECHHHH VVERYSHVMHIVSNVDGELREDLGPLDVLRATFPAGTLSGAPKIRAMEIIDELEPTKRGV HHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCCC YGGAVGYIGFNGDMDTAIAIRTAVIKDQRLYVQAGAGIVADSVPQSEWDETMNKARAVFR CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHH AVNMALGGLNLADGGQ HHHHHHCCCCCCCCCC >Mature Secondary Structure SPQELDRFAQQGYTRVPVVREVLADLDTPLSAYRKLASGPYTYLFESVQGGERWGRYSI CHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCEEE IGLPATEVVRITGQQVQVDGPEGRQHYEAADPISWVEEYRKAYRSPDLEGLPRFNGGLVG EECCHHHEEEECCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEE YFGYDSVRYFEPRLGPAPGEDVLGVPDILLMRSEEVVVFDNLRGALFLVVHVDPKEDGVL EECCCCEEEECCCCCCCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEEECCCCCCEE MRAEQRLEALESQLRAPLSEPAHTVYGEPVDENDFHHEFPQDAFKAGVETIREYILAGDV HHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH MQVVPSQRMSCPFQAPALDLYRALRYLNPSPYMFYLDLDDFHIAGSSPEILARAEQGRTT HHHCCHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECCCCHHHHHHHHCCCCE VRPLAGTRKRGANEAEDLALEKDLLADPKEIAEHLMLIDLGRNDIGRVSKAGKVEVSDQM ECCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCHHHCCCCCCEECHHHH VVERYSHVMHIVSNVDGELREDLGPLDVLRATFPAGTLSGAPKIRAMEIIDELEPTKRGV HHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHCCC YGGAVGYIGFNGDMDTAIAIRTAVIKDQRLYVQAGAGIVADSVPQSEWDETMNKARAVFR CCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHHHHHHHHH AVNMALGGLNLADGGQ HHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2404959 [H]