| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
Click here to switch to the map view.
The map label for this gene is 110834866
Identifier: 110834866
GI number: 110834866
Start: 2291758
End: 2291988
Strand: Reverse
Name: 110834866
Synonym: ABO_2005
Alternate gene names: NA
Gene position: 2291988-2291758 (Counterclockwise)
Preceding gene: 110834867
Following gene: 110834865
Centisome position: 73.46
GC content: 54.11
Gene sequence:
>231_bases ATGATGAAATTTGCGTTGGGAATACCCGTGTTTCTGATCACTGTGGGCTGTGTGTCCGGGTGCCAGAACCTGGGGGTGCA ACCCTGGGAGCGTGATTTGTTGGCCAAACCAGTAATGACGATGGGTGCTGCGGATGGTCTCGATGATGCGCTGGATGATC ACATCTATTTTAGCAAGGAAGCCTCCAGCGGTGGGCGTGGATTTGGTGGCGGTGGCTGTGGCTGTAATTGA
Upstream 100 bases:
>100_bases TGATGGATGAGCGCGGGAACGCGCTAGCCCGTCATATCGGTTTTATGGAAACAAATAAGGACGCCTACGAGCAAGAAATC GTCCAGCTGCTGGAGGAGCA
Downstream 100 bases:
>100_bases GGAAGGCGTAATGAAAAAAAAACTGGATGGGAAGACGATTGGGAGTGGCCTGGCCGCTGCGACCTGTGCTCTGCTGGGCC AGCCGGTACAGGCACAGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 76
Protein sequence:
>76_residues MMKFALGIPVFLITVGCVSGCQNLGVQPWERDLLAKPVMTMGAADGLDDALDDHIYFSKEASSGGRGFGGGGCGCN
Sequences:
>Translated_76_residues MMKFALGIPVFLITVGCVSGCQNLGVQPWERDLLAKPVMTMGAADGLDDALDDHIYFSKEASSGGRGFGGGGCGCN >Mature_76_residues MMKFALGIPVFLITVGCVSGCQNLGVQPWERDLLAKPVMTMGAADGLDDALDDHIYFSKEASSGGRGFGGGGCGCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7855; Mature: 7855
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 10.5 %Cys+Met (Translated Protein) 5.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 10.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKFALGIPVFLITVGCVSGCQNLGVQPWERDLLAKPVMTMGAADGLDDALDDHIYFSKE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCC ASSGGRGFGGGGCGCN CCCCCCCCCCCCCCCC >Mature Secondary Structure MMKFALGIPVFLITVGCVSGCQNLGVQPWERDLLAKPVMTMGAADGLDDALDDHIYFSKE CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCC ASSGGRGFGGGGCGCN CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA