Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is resA [H]

Identifier: 110834867

GI number: 110834867

Start: 2291985

End: 2292428

Strand: Reverse

Name: resA [H]

Synonym: ABO_2006

Alternate gene names: 110834867

Gene position: 2292428-2291985 (Counterclockwise)

Preceding gene: 110834880

Following gene: 110834866

Centisome position: 73.47

GC content: 55.86

Gene sequence:

>444_bases
ATGCGCTTTCTACGGGTGCTTGCCCTGCTGGTCATCCCCTGGCTGGCTCATGCGGAACCGTTGCCATTTTCCCCCGAGCA
GGTCGGGGAAGCAAAAGTCATTTACGTAGACTTTTGGGCCAGCTGGTGCGTGCCTTGCCGGCGCTCGTTTCCTTGGCTGA
ATCGGATGCAGGCGAAATATGGAGATCGTGGGTTCACCATCATCGGTGTGAATTTGGACCTGCGCAAAGAGGATGCAGAG
AAGTTTCTGGCCAATTACCCGGCCACTTTCCCGTTGGTGTTTGACCCACAAGGGGAGCTGGCAAGCCGCTATCAGCTTCA
AGGGATGCCCAGTGCCGTGCTGATGGATGAGCGCGGGAACGCGCTAGCCCGTCATATCGGTTTTATGGAAACAAATAAGG
ACGCCTACGAGCAAGAAATCGTCCAGCTGCTGGAGGAGCAATGA

Upstream 100 bases:

>100_bases
CAGGATAGCCGATAAGTTTCAGGGCAGATTATTAACAGTGCCTTAAGGTTACTTTAAGGCGCCGGTAGGAGGCTGTGGTC
TCAATATCAAGGAGAAGCCT

Downstream 100 bases:

>100_bases
TGAAATTTGCGTTGGGAATACCCGTGTTTCTGATCACTGTGGGCTGTGTGTCCGGGTGCCAGAACCTGGGGGTGCAACCC
TGGGAGCGTGATTTGTTGGC

Product: thioredoxin family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE
KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ

Sequences:

>Translated_147_residues
MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE
KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ
>Mature_147_residues
MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKYGDRGFTIIGVNLDLRKEDAE
KFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGNALARHIGFMETNKDAYEQEIVQLLEEQ

Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 16949; Mature: 16949

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKY
CHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHC
GDRGFTIIGVNLDLRKEDAEKFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGN
CCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCC
ALARHIGFMETNKDAYEQEIVQLLEEQ
HHHHHHCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFLRVLALLVIPWLAHAEPLPFSPEQVGEAKVIYVDFWASWCVPCRRSFPWLNRMQAKY
CHHHHHHHHHHHHHHHCCCCCCCCHHHCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHHC
GDRGFTIIGVNLDLRKEDAEKFLANYPATFPLVFDPQGELASRYQLQGMPSAVLMDERGN
CCCCCEEEEEEEECCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHCCCCCEEEECCCCC
ALARHIGFMETNKDAYEQEIVQLLEEQ
HHHHHHCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA