| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834853
Identifier: 110834853
GI number: 110834853
Start: 2279973
End: 2281046
Strand: Reverse
Name: 110834853
Synonym: ABO_1992
Alternate gene names: NA
Gene position: 2281046-2279973 (Counterclockwise)
Preceding gene: 110834856
Following gene: 110834852
Centisome position: 73.11
GC content: 51.21
Gene sequence:
>1074_bases ATGACATTGAATCGTCTCATTTTGCCGGCCGTTATTGCGGCACTTGCCACCGGTTGTGCCAGCAACCAAACTATTCAGGA AACACGAGAATATCAAACGCTGCAAAGTCAGCAGCAGCAACTGGAACAGGAAAATCAGCAGCTACGAGCCGCGTTGAGCT CCAATGATCAGCAGCCGGCCTCTACAGATTCTTCCAGCTCTGGCGCCCAGCTGCTGCCGCCTAATGCCCTGCCGGGACAT TGTTATGCACGGGTTGTGATTCCGGAAACCTACAAAACGGAAATGCAGCGTGTAATGGTGTCTCAGGAAGACAGCAAGAT TTCCACCACCCCCGCACGCTATGAAACCGTGCAAGAGAAGATCCTGGTCAGCGAAGCCTATGAGAAGCTGAAAGTCATTC CGGCTACCTACAAGACCGTGACTGAGGAAGTGTTGGTTAAAGGTGCGACTACCAAGCTGATCACTAAACCGGCGGAATAT AAAACGGTTACCGAGCAAGTACTGGTCAAGCCAGCCTACACGACCTGGAAAAAAGGCCGTGGCCCTATCGAGAAACTCGA TCATTCCACCGGTGAAATTATGTGTTTGGTGGAAGTGCCGGCGGAATACAAAACCATTAGCCGTAAGGAACTGGTAAAAC CTGAGCGCACTGAAGAAGTTAAAATTCCTGCCGTGTACAAGACGGTCACTAAGAAAGTGGTCGATAAGCCTGCCCGGACT GAAAAAGTCACTGTGCCAGCTGTCTATAGCACGGTTGAGGTGGTCAAGCAGGTAGAGCCGCCTAAAGAGAAGAAAACAGT GATCCCCGCCGTTTACAAAGACGTGCCTAAGCAGGTCAAAGTGACGGATGCGGATATGGAATGGCGTGAAATTCTCTGTG AAACCAATACCACTCAGGATGTTGTCCGCCGCCTCCAAAAAGCGCTGGCCGCGAAAGGTTACGACCCGGTTTGGATTGAT GGCGTATACGGCTCCAAGACCCGAGCGGCTGTGATCGCTTACCAGAAGGATAACGATTTGGCTTCTGGTCAGCTGACCAT GCAGACCCTGGATCACTTAGGTGTGAAACTGTAA
Upstream 100 bases:
>100_bases ATTGCGCATTTATAGACGTATTGATAATTGTCCCTGACATTTTTATTGAGCATTGTTCCATATGAAGAAAATAACGCGTG TTTTTCAAAGGGAACAGACT
Downstream 100 bases:
>100_bases CGCTTTTTTTTAGTATTTAATCAAGGCCGGCTTTTGTCGGCCTTTTTTTATGGTTTTCGTGGAGCGAAGTGCTGTCGAAT TCTCGCTTCTTTAATGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTLNRLILPAVIAALATGCASNQTIQETREYQTLQSQQQQLEQENQQLRAALSSNDQQPASTDSSSSGAQLLPPNALPGH CYARVVIPETYKTEMQRVMVSQEDSKISTTPARYETVQEKILVSEAYEKLKVIPATYKTVTEEVLVKGATTKLITKPAEY KTVTEQVLVKPAYTTWKKGRGPIEKLDHSTGEIMCLVEVPAEYKTISRKELVKPERTEEVKIPAVYKTVTKKVVDKPART EKVTVPAVYSTVEVVKQVEPPKEKKTVIPAVYKDVPKQVKVTDADMEWREILCETNTTQDVVRRLQKALAAKGYDPVWID GVYGSKTRAAVIAYQKDNDLASGQLTMQTLDHLGVKL
Sequences:
>Translated_357_residues MTLNRLILPAVIAALATGCASNQTIQETREYQTLQSQQQQLEQENQQLRAALSSNDQQPASTDSSSSGAQLLPPNALPGH CYARVVIPETYKTEMQRVMVSQEDSKISTTPARYETVQEKILVSEAYEKLKVIPATYKTVTEEVLVKGATTKLITKPAEY KTVTEQVLVKPAYTTWKKGRGPIEKLDHSTGEIMCLVEVPAEYKTISRKELVKPERTEEVKIPAVYKTVTKKVVDKPART EKVTVPAVYSTVEVVKQVEPPKEKKTVIPAVYKDVPKQVKVTDADMEWREILCETNTTQDVVRRLQKALAAKGYDPVWID GVYGSKTRAAVIAYQKDNDLASGQLTMQTLDHLGVKL >Mature_356_residues TLNRLILPAVIAALATGCASNQTIQETREYQTLQSQQQQLEQENQQLRAALSSNDQQPASTDSSSSGAQLLPPNALPGHC YARVVIPETYKTEMQRVMVSQEDSKISTTPARYETVQEKILVSEAYEKLKVIPATYKTVTEEVLVKGATTKLITKPAEYK TVTEQVLVKPAYTTWKKGRGPIEKLDHSTGEIMCLVEVPAEYKTISRKELVKPERTEEVKIPAVYKTVTKKVVDKPARTE KVTVPAVYSTVEVVKQVEPPKEKKTVIPAVYKDVPKQVKVTDADMEWREILCETNTTQDVVRRLQKALAAKGYDPVWIDG VYGSKTRAAVIAYQKDNDLASGQLTMQTLDHLGVKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39791; Mature: 39660
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLNRLILPAVIAALATGCASNQTIQETREYQTLQSQQQQLEQENQQLRAALSSNDQQPA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STDSSSSGAQLLPPNALPGHCYARVVIPETYKTEMQRVMVSQEDSKISTTPARYETVQEK CCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ILVSEAYEKLKVIPATYKTVTEEVLVKGATTKLITKPAEYKTVTEQVLVKPAYTTWKKGR HHHHHHHHHHEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHCCC GPIEKLDHSTGEIMCLVEVPAEYKTISRKELVKPERTEEVKIPAVYKTVTKKVVDKPART CCHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCC EKVTVPAVYSTVEVVKQVEPPKEKKTVIPAVYKDVPKQVKVTDADMEWREILCETNTTQD CEEEHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCEEEECCCHHHHHHHHCCCCHHH VVRRLQKALAAKGYDPVWIDGVYGSKTRAAVIAYQKDNDLASGQLTMQTLDHLGVKL HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TLNRLILPAVIAALATGCASNQTIQETREYQTLQSQQQQLEQENQQLRAALSSNDQQPA CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC STDSSSSGAQLLPPNALPGHCYARVVIPETYKTEMQRVMVSQEDSKISTTPARYETVQEK CCCCCCCCCEECCCCCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH ILVSEAYEKLKVIPATYKTVTEEVLVKGATTKLITKPAEYKTVTEQVLVKPAYTTWKKGR HHHHHHHHHHEECCHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCCHHHHHCCC GPIEKLDHSTGEIMCLVEVPAEYKTISRKELVKPERTEEVKIPAVYKTVTKKVVDKPART CCHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHCCCCCC EKVTVPAVYSTVEVVKQVEPPKEKKTVIPAVYKDVPKQVKVTDADMEWREILCETNTTQD CEEEHHHHHHHHHHHHHCCCCHHHCCCCHHHHHCCCCCEEEECCCHHHHHHHHCCCCHHH VVRRLQKALAAKGYDPVWIDGVYGSKTRAAVIAYQKDNDLASGQLTMQTLDHLGVKL HHHHHHHHHHHCCCCCEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA