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The map label for this gene is oruR [H]

Identifier: 110834856

GI number: 110834856

Start: 2282792

End: 2283820

Strand: Reverse

Name: oruR [H]

Synonym: ABO_1995

Alternate gene names: 110834856

Gene position: 2283820-2282792 (Counterclockwise)

Preceding gene: 110834858

Following gene: 110834853

Centisome position: 73.2

GC content: 57.53

Gene sequence:

>1029_bases
ATGGTGAGTTCGGGCCGTCCCTGGGGAGGTGCGGGGGTGCCAGGTATTTATGTGGTGCTGCTGTATGACGTACTAGAGTC
CCTGAACCTGGATGCCTCGGCACTGTTGGTAGGGCTTGGGGTGAGCCGTGACGAGTTGCTGGCGGTGGACCGCCGGGTGT
CTATGTCACTGGCCCAGACTGTGGCGGAACGTGGCGTTGAAATGGTGGGCGAGCGAGGCTTGGGGTTTCGTTATGCTCGG
GCCATGAGTATCACTTTACATGGCCCGGTGGGGCTATTGGCCCTATCCAGCGCCAGCGCCCAGGATGCACTGGATGCAGC
GTGCCGTTTTCTAGGGTTACGTGCCCCTTTCCTGGAAATCCACCGGACTCGTCAATCCGGGCAGGCTCATCTTCAATTGC
GCAGCACGCGACCGCTAGGCATCGCTCACGATTTTATTATTGAGGCTATGTTGGTGGGGTTGGTCTTTATGATCGAGCAG
TTGCTGGAGAGCCTGCCGCAAGGATTGGAGATTCATCGATGCGGGCCTGCGCCGGCCTGGTTAATGGCATTGCGAAAAGA
GGTGGGCGTGCCAGTATGCTTTGATCAAGAGGAAAATGCGTTGGTATTTCCTCTGTCGGCGCTGGAAGCTCGCCCTCGAT
TGGCGGACCCTCAGGTGGCGGCCATTGCTCGGCAGCAATGCGAGATGGAGTTTCGTCAGTGGCGCACCGAAGACGAGGGT
GTGATGGCGAGGCGTATTCGCTCAGCCTTGCAAGACCACCCGGCGCCTTTGCCGTCGCTACAGGGGATGGCGGAGCGGCT
GGCGGTATCGGCTCGTACGTTGAAGCGTCATTTGCAGCAGGCCGGGTTGAGCTATCGTCAATTGCAGGATGAAGAGCGTT
ATCAGCAGGCACGCCGTTTGTTGGTTCAATCAGAAAACAGCATTAGTGAAGTGGCATACCGATTGGGATATAACGATGTG
GCCAATTTCTCCAAGGCATTTAAGCGTTGGAGTGGGATGACTCCGAGCGCCTATCGAGAGAAGAGGTAG

Upstream 100 bases:

>100_bases
GTCTGGAGCCGGGTAGCAGCGTATTCGCTTTGAACAGGCTCATAATGCCAACTACTATGCGGAGTCTTGCATTCAAGGTC
TTGTCGCGGAGGGCCAACAA

Downstream 100 bases:

>100_bases
GCGTCAGCCTAAGCTGAAAAGCGAGGGACGATTAGGAAAAAGGGCGTTCCGTGTTTGCGTTTGCTCTGTGCGGGCAGAGC
TTATTGCATGTTGCTGCAAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MVSSGRPWGGAGVPGIYVVLLYDVLESLNLDASALLVGLGVSRDELLAVDRRVSMSLAQTVAERGVEMVGERGLGFRYAR
AMSITLHGPVGLLALSSASAQDALDAACRFLGLRAPFLEIHRTRQSGQAHLQLRSTRPLGIAHDFIIEAMLVGLVFMIEQ
LLESLPQGLEIHRCGPAPAWLMALRKEVGVPVCFDQEENALVFPLSALEARPRLADPQVAAIARQQCEMEFRQWRTEDEG
VMARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRLLVQSENSISEVAYRLGYNDV
ANFSKAFKRWSGMTPSAYREKR

Sequences:

>Translated_342_residues
MVSSGRPWGGAGVPGIYVVLLYDVLESLNLDASALLVGLGVSRDELLAVDRRVSMSLAQTVAERGVEMVGERGLGFRYAR
AMSITLHGPVGLLALSSASAQDALDAACRFLGLRAPFLEIHRTRQSGQAHLQLRSTRPLGIAHDFIIEAMLVGLVFMIEQ
LLESLPQGLEIHRCGPAPAWLMALRKEVGVPVCFDQEENALVFPLSALEARPRLADPQVAAIARQQCEMEFRQWRTEDEG
VMARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRLLVQSENSISEVAYRLGYNDV
ANFSKAFKRWSGMTPSAYREKR
>Mature_342_residues
MVSSGRPWGGAGVPGIYVVLLYDVLESLNLDASALLVGLGVSRDELLAVDRRVSMSLAQTVAERGVEMVGERGLGFRYAR
AMSITLHGPVGLLALSSASAQDALDAACRFLGLRAPFLEIHRTRQSGQAHLQLRSTRPLGIAHDFIIEAMLVGLVFMIEQ
LLESLPQGLEIHRCGPAPAWLMALRKEVGVPVCFDQEENALVFPLSALEARPRLADPQVAAIARQQCEMEFRQWRTEDEG
VMARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRLLVQSENSISEVAYRLGYNDV
ANFSKAFKRWSGMTPSAYREKR

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790339, Length=94, Percent_Identity=37.2340425531915, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37956; Mature: 37956

Theoretical pI: Translated: 8.61; Mature: 8.61

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSSGRPWGGAGVPGIYVVLLYDVLESLNLDASALLVGLGVSRDELLAVDRRVSMSLAQT
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAERGVEMVGERGLGFRYARAMSITLHGPVGLLALSSASAQDALDAACRFLGLRAPFLEI
HHHHHHHHHHCCCCCEEEHHEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
HRTRQSGQAHLQLRSTRPLGIAHDFIIEAMLVGLVFMIEQLLESLPQGLEIHRCGPAPAW
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHH
LMALRKEVGVPVCFDQEENALVFPLSALEARPRLADPQVAAIARQQCEMEFRQWRTEDEG
HHHHHHHCCCCEEECCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
VMARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVQSENSISEVAYRLGYNDVANFSKAFKRWSGMTPSAYREKR
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCC
>Mature Secondary Structure
MVSSGRPWGGAGVPGIYVVLLYDVLESLNLDASALLVGLGVSRDELLAVDRRVSMSLAQT
CCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
VAERGVEMVGERGLGFRYARAMSITLHGPVGLLALSSASAQDALDAACRFLGLRAPFLEI
HHHHHHHHHHCCCCCEEEHHEEEEEEECCHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHH
HRTRQSGQAHLQLRSTRPLGIAHDFIIEAMLVGLVFMIEQLLESLPQGLEIHRCGPAPAW
HHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHH
LMALRKEVGVPVCFDQEENALVFPLSALEARPRLADPQVAAIARQQCEMEFRQWRTEDEG
HHHHHHHCCCCEEECCCCCEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCH
VMARRIRSALQDHPAPLPSLQGMAERLAVSARTLKRHLQQAGLSYRQLQDEERYQQARRL
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LVQSENSISEVAYRLGYNDVANFSKAFKRWSGMTPSAYREKR
HHHCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]