| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is pfkA [H]
Identifier: 110834850
GI number: 110834850
Start: 2275917
End: 2277179
Strand: Direct
Name: pfkA [H]
Synonym: ABO_1989
Alternate gene names: 110834850
Gene position: 2275917-2277179 (Clockwise)
Preceding gene: 110834848
Following gene: 110834854
Centisome position: 72.94
GC content: 55.42
Gene sequence:
>1263_bases ATGGCGCGTAAAAACGCTTTCTATGCTCAGTCCGGCGGTGTTACTGCCGTCATCAATGCTTCTGCTGCCGGCGTTATTGA AGCAGCACGAGAAAACAAGGATGTGATCGGCAAAGTCTACGCCGGCCGGAATGGCATCATCGGCGCACTCACTGAAGAGC TGATCGATACAAGCAAAGAAAGCAAAAGCGCCATTGAAGCGCTCAAGCACACCCCCGGCGGGGCCTTCGGTTCTTGCCGC TATAAGCTGAAAGACCTCAAGACCTCCCAACGCGAATACGAACGTCTAATCGAAGTCTTCAAGGCTCACAACATCGGCTA CTTCTTCTATAACGGTGGTGGTGATTCCGCCGACACCTGCCTAAAAGTATCACAGCTTTCCGAGAAAATGGGCTACCCGA TCCAGGCTATCCACGTGCCCAAAACCGTGGACAACGACCTGCCCTTCACCGACGTGAGCCCTGGTTTCGGTTCCGTCGCC AAGTACACCGCTGTGAGCTGCCGTGAGGCCGCCCTGGACGTGGCCAGCATGTGCGCCACCTCCACCAAGGTGTTCGTGAT GGAAGTCATGGGCCGTCACGCTGGCTGGATCGCCGCCTCCGCCGGGCTCGCCAAAGAGGATGCCGATGACGCTCCGCACC TAATCTTGTTCCCGGAAATTGCCTTCGACAAAGCGGCCTTCATGAAAAAGGTGGAAGCCACCGTCAAGAAAGCGGGCTAT TGCGTCATTGTGGTGTCCGAAGGGGCTCGCTATGAAGACGGCACGTTCTTGGCCGACGCGGGTAACACTGACGCCTTTGG CCACAAACAGCTAGGCGGTGTGGCTCCGGTCATCGCTCAGATGGTGAAAGACGAACTCGGCTACAAATACCACTGGGCTG TAAGCGATTACTTACAGCGTGCCGCACGCCACATAGCATCAGCCACTGACGTGGAGCAAGCCTACGCAGTGGGCCGCGCC GCCGTTGAGTTCGCCGTGGCGGGTAAAAACGCAGTCATGCCCACCGTGGTTCGCAAGGACACAAAAAAATACAGCTGGAC CATCGGCGAAGCGCCGCTAAAGAAAGTGGCCAATGTAGAAAAGAAAATGCCGCGTAAATACATTAGCAAAGATGGTTTCG GCATTACCCCCGCGGCCCGAGCCTACCTAGAGCCTTTGATTGGTGGTGAATCCTACCCTCCCTACAAAAACGGGCTGCCG CAATTTGCCAAACTAAAACTAGCCCCAGTCGAGAAAAAGTTAAACGATGCTTTTGAGGTCTAA
Upstream 100 bases:
>100_bases TGCACACCTTGAACCTTGACACGATATGGTCCGACAACCACAGGTGTGTTTTTTGGACGCCTTCGCTAGAATGCTCACAA ATTGAATCAAGGGGTCTCAC
Downstream 100 bases:
>100_bases AACACTAGCATCTTGATAAAAAGCAAAAGCCTCGCAATGCGAGGCTTTTGCTTTTCACTAACGGCCAATGGCCATTCAGC CCTGACCGTTTCCCAGAACA
Product: 6-phosphofructokinase
Products: NA
Alternate protein names: 6-phosphofructokinase, pyrophosphate dependent; PPi-dependent phosphofructokinase; PPi-PFK; Pyrophosphate-dependent 6-phosphofructose-1-kinase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MARKNAFYAQSGGVTAVINASAAGVIEAARENKDVIGKVYAGRNGIIGALTEELIDTSKESKSAIEALKHTPGGAFGSCR YKLKDLKTSQREYERLIEVFKAHNIGYFFYNGGGDSADTCLKVSQLSEKMGYPIQAIHVPKTVDNDLPFTDVSPGFGSVA KYTAVSCREAALDVASMCATSTKVFVMEVMGRHAGWIAASAGLAKEDADDAPHLILFPEIAFDKAAFMKKVEATVKKAGY CVIVVSEGARYEDGTFLADAGNTDAFGHKQLGGVAPVIAQMVKDELGYKYHWAVSDYLQRAARHIASATDVEQAYAVGRA AVEFAVAGKNAVMPTVVRKDTKKYSWTIGEAPLKKVANVEKKMPRKYISKDGFGITPAARAYLEPLIGGESYPPYKNGLP QFAKLKLAPVEKKLNDAFEV
Sequences:
>Translated_420_residues MARKNAFYAQSGGVTAVINASAAGVIEAARENKDVIGKVYAGRNGIIGALTEELIDTSKESKSAIEALKHTPGGAFGSCR YKLKDLKTSQREYERLIEVFKAHNIGYFFYNGGGDSADTCLKVSQLSEKMGYPIQAIHVPKTVDNDLPFTDVSPGFGSVA KYTAVSCREAALDVASMCATSTKVFVMEVMGRHAGWIAASAGLAKEDADDAPHLILFPEIAFDKAAFMKKVEATVKKAGY CVIVVSEGARYEDGTFLADAGNTDAFGHKQLGGVAPVIAQMVKDELGYKYHWAVSDYLQRAARHIASATDVEQAYAVGRA AVEFAVAGKNAVMPTVVRKDTKKYSWTIGEAPLKKVANVEKKMPRKYISKDGFGITPAARAYLEPLIGGESYPPYKNGLP QFAKLKLAPVEKKLNDAFEV >Mature_419_residues ARKNAFYAQSGGVTAVINASAAGVIEAARENKDVIGKVYAGRNGIIGALTEELIDTSKESKSAIEALKHTPGGAFGSCRY KLKDLKTSQREYERLIEVFKAHNIGYFFYNGGGDSADTCLKVSQLSEKMGYPIQAIHVPKTVDNDLPFTDVSPGFGSVAK YTAVSCREAALDVASMCATSTKVFVMEVMGRHAGWIAASAGLAKEDADDAPHLILFPEIAFDKAAFMKKVEATVKKAGYC VIVVSEGARYEDGTFLADAGNTDAFGHKQLGGVAPVIAQMVKDELGYKYHWAVSDYLQRAARHIASATDVEQAYAVGRAA VEFAVAGKNAVMPTVVRKDTKKYSWTIGEAPLKKVANVEKKMPRKYISKDGFGITPAARAYLEPLIGGESYPPYKNGLPQ FAKLKLAPVEKKLNDAFEV
Specific function: Key control step of glycolysis. [C]
COG id: COG0205
COG function: function code G; 6-phosphofructokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphofructokinase family [H]
Homologues:
Organism=Escherichia coli, GI1790350, Length=242, Percent_Identity=26.0330578512397, Blast_Score=62, Evalue=8e-11,
Paralogues:
None
Copy number: 3981 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 950 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012003 - InterPro: IPR012829 - InterPro: IPR022953 - InterPro: IPR015912 - InterPro: IPR000023 [H]
Pfam domain/function: PF00365 PFK [H]
EC number: =2.7.1.90 [H]
Molecular weight: Translated: 45264; Mature: 45133
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKNAFYAQSGGVTAVINASAAGVIEAARENKDVIGKVYAGRNGIIGALTEELIDTSKE CCCCCCEEECCCCEEEEEECCHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHCCHH SKSAIEALKHTPGGAFGSCRYKLKDLKTSQREYERLIEVFKAHNIGYFFYNGGGDSADTC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH LKVSQLSEKMGYPIQAIHVPKTVDNDLPFTDVSPGFGSVAKYTAVSCREAALDVASMCAT HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC STKVFVMEVMGRHAGWIAASAGLAKEDADDAPHLILFPEIAFDKAAFMKKVEATVKKAGY CHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCE CVIVVSEGARYEDGTFLADAGNTDAFGHKQLGGVAPVIAQMVKDELGYKYHWAVSDYLQR EEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHH AARHIASATDVEQAYAVGRAAVEFAVAGKNAVMPTVVRKDTKKYSWTIGEAPLKKVANVE HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHH KKMPRKYISKDGFGITPAARAYLEPLIGGESYPPYKNGLPQFAKLKLAPVEKKLNDAFEV HHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHEEECHHHHHHHHHHCC >Mature Secondary Structure ARKNAFYAQSGGVTAVINASAAGVIEAARENKDVIGKVYAGRNGIIGALTEELIDTSKE CCCCCEEECCCCEEEEEECCHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHCCHH SKSAIEALKHTPGGAFGSCRYKLKDLKTSQREYERLIEVFKAHNIGYFFYNGGGDSADTC HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH LKVSQLSEKMGYPIQAIHVPKTVDNDLPFTDVSPGFGSVAKYTAVSCREAALDVASMCAT HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC STKVFVMEVMGRHAGWIAASAGLAKEDADDAPHLILFPEIAFDKAAFMKKVEATVKKAGY CHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCE CVIVVSEGARYEDGTFLADAGNTDAFGHKQLGGVAPVIAQMVKDELGYKYHWAVSDYLQR EEEEECCCCCCCCCCEEECCCCCCCCCCHHHCCHHHHHHHHHHHHHCCEEEEHHHHHHHH AARHIASATDVEQAYAVGRAAVEFAVAGKNAVMPTVVRKDTKKYSWTIGEAPLKKVANVE HHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHCCCCEEEECCHHHHHHHHHHH KKMPRKYISKDGFGITPAARAYLEPLIGGESYPPYKNGLPQFAKLKLAPVEKKLNDAFEV HHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHEEECHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10913106 [H]