| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is ygaP [C]
Identifier: 110834854
GI number: 110834854
Start: 2281549
End: 2281917
Strand: Direct
Name: ygaP [C]
Synonym: ABO_1993
Alternate gene names: 110834854
Gene position: 2281549-2281917 (Clockwise)
Preceding gene: 110834850
Following gene: 110834855
Centisome position: 73.12
GC content: 53.66
Gene sequence:
>369_bases ATGAAGCGTTATCTAATCATTTCAATTTTTGCCGTGTTGAACACACTTTGTGCTTCGCTATGGGCGGCTGACAGCCTCTC CGTGAGCGAACTCAAGCAAAGGATGCAAGACGGCAACGCGCCCATCATTATTGATGTGCGCGATGAAGACGAATATCTGG CCGGGCATATTCCCGGCGCCATCATGGTCCCCGCCAAACAGATGGAACATCACCTGGACATGATGGAGCAGTATCGCAAA GAAGACATCGTGCTGTATTGCCAATCTGGCCGCCGGGCCAGCGCCGCTGCCACCGTACTGGAAAATGCCGGCTTCAAGAA CGTGAAGCTGCTGCAAGGGAATTATCCGGGCTGGGAGTCCGCCCAATAA
Upstream 100 bases:
>100_bases CTTTATAATCACCCCTGCCGTTCGTTAGCAGGGGCCGGCACGACGCAGAAAAACGTTGGGAGCATAGGTAAGCATGGAAA AATCGAAAGGAGCCGCAATC
Downstream 100 bases:
>100_bases GCACCGATTTGCCCATCACCACACCTCCGACTGCCTATGGAATAAGGATATTTCTATTCCATAGGCAAGTTCGACTGTCC CCGATTAGCCGTCGTCCGCT
Product: rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Molybdopterin Biosynthesis Protein MoeB; Phage Shock Protein E; Molybdopterin Biosynthesis Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SirA Family Protein; Rhodanese-Like Domain Protein; Rhodanese Domain Containing Protein; Beta-Lactamase-Like Protein; Molybdenum Cofactor Biosynthesis; Rhodanese-Like Domain-Containing Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese-Like Domain; Rhodanese/Sulfurtransferase-Like Protein; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Beta-Lactamase Domain-Containing Protein
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ
Sequences:
>Translated_122_residues MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ >Mature_122_residues MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13670; Mature: 13670
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGA CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCE IMVPAKQMEHHLDMMEQYRKEDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWES EEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC AQ CC >Mature Secondary Structure MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGA CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCE IMVPAKQMEHHLDMMEQYRKEDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWES EEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC AQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA