Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is ygaP [C]

Identifier: 110834854

GI number: 110834854

Start: 2281549

End: 2281917

Strand: Direct

Name: ygaP [C]

Synonym: ABO_1993

Alternate gene names: 110834854

Gene position: 2281549-2281917 (Clockwise)

Preceding gene: 110834850

Following gene: 110834855

Centisome position: 73.12

GC content: 53.66

Gene sequence:

>369_bases
ATGAAGCGTTATCTAATCATTTCAATTTTTGCCGTGTTGAACACACTTTGTGCTTCGCTATGGGCGGCTGACAGCCTCTC
CGTGAGCGAACTCAAGCAAAGGATGCAAGACGGCAACGCGCCCATCATTATTGATGTGCGCGATGAAGACGAATATCTGG
CCGGGCATATTCCCGGCGCCATCATGGTCCCCGCCAAACAGATGGAACATCACCTGGACATGATGGAGCAGTATCGCAAA
GAAGACATCGTGCTGTATTGCCAATCTGGCCGCCGGGCCAGCGCCGCTGCCACCGTACTGGAAAATGCCGGCTTCAAGAA
CGTGAAGCTGCTGCAAGGGAATTATCCGGGCTGGGAGTCCGCCCAATAA

Upstream 100 bases:

>100_bases
CTTTATAATCACCCCTGCCGTTCGTTAGCAGGGGCCGGCACGACGCAGAAAAACGTTGGGAGCATAGGTAAGCATGGAAA
AATCGAAAGGAGCCGCAATC

Downstream 100 bases:

>100_bases
GCACCGATTTGCCCATCACCACACCTCCGACTGCCTATGGAATAAGGATATTTCTATTCCATAGGCAAGTTCGACTGTCC
CCGATTAGCCGTCGTCCGCT

Product: rhodanese domain-containing protein

Products: NA

Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Rhodanese-Related Sulfurtransferase; Molybdopterin Biosynthesis Protein MoeB; Phage Shock Protein E; Molybdopterin Biosynthesis Protein; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; SirA Family Protein; Rhodanese-Like Domain Protein; Rhodanese Domain Containing Protein; Beta-Lactamase-Like Protein; Molybdenum Cofactor Biosynthesis; Rhodanese-Like Domain-Containing Protein; Metallo-Beta-Lactamase Superfamily Protein; Rhodanese-Like Domain; Rhodanese/Sulfurtransferase-Like Protein; Rhodanese-Domain Protein; Rhodanese/Moeb/Thif Domain Protein; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK
EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ

Sequences:

>Translated_122_residues
MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK
EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ
>Mature_122_residues
MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGAIMVPAKQMEHHLDMMEQYRK
EDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWESAQ

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13670; Mature: 13670

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCE
IMVPAKQMEHHLDMMEQYRKEDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWES
EEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
AQ
CC
>Mature Secondary Structure
MKRYLIISIFAVLNTLCASLWAADSLSVSELKQRMQDGNAPIIIDVRDEDEYLAGHIPGA
CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCE
IMVPAKQMEHHLDMMEQYRKEDIVLYCQSGRRASAAATVLENAGFKNVKLLQGNYPGWES
EEECHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCC
AQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA