Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is lipH [H]

Identifier: 110834837

GI number: 110834837

Start: 2254437

End: 2255447

Strand: Direct

Name: lipH [H]

Synonym: ABO_1976

Alternate gene names: 110834837

Gene position: 2254437-2255447 (Clockwise)

Preceding gene: 110834836

Following gene: 110834847

Centisome position: 72.25

GC content: 50.94

Gene sequence:

>1011_bases
ATGACACGAACATTTGTTCTACTTATCGCAATAGTGCTCTCAGCTAGCAGCTTATTCTGGGGCTTTCAGCACCTAACTGC
TTCCCCTCTTCCGCTACCCACAGCGAGTAACACGAACACCCAAATCAGCACCACTTACACTGCCACAATTGAAGCGGGAA
GAGCAGCTAAGCAGACGCTAAATCTAGCCCAAATGCTGACAAATACTTCGTTAGCGGGCACGCAAGTCCCTGGAAGTCTA
ACGATCGATGCCCTGGGCCGCCTGATTCCAGACAACCACAGCAAAGCTGTCATGGATTATTTCTTATCTTTGAGTGGAGA
AATGCCTGACGCGTCAATCCGCAGACTGCTGGAACACTGGGCCCGACACAACGCGGGGCAACTTGCCGCCGCTGACTTGC
TGACACTGTTTGATCAATATCATTATTATCGGTCCCGATTAGCTAACAGCGATTACGCCGCACATTATTTGAATAAGAAC
AGCGGGGATATTCGCAACAAGCTTGAACAACGACAAAAACTGCGCAATGACACATTTGGGACCGATATAGCTGCAGCTTT
GTTCGCAGATGAGGACCGCTACGATAGGGTCAGTTTGCAGCGCAACCAGATCCTGACATCGCGTCGTTCTGAGAAAGAAA
AGGCTGACGCCCTGCAAGAGCTTCGCAAGGCGCTACCCGAAGCCTTGGCAAAACAACACCAGCGGCAGTACGATTTGCAA
CGCCTCACAGCCCATGAGCAATCCATAAAACAACAAGGCGCTAATGCCGCCGATCTCTATGCTTTCCGCCAACGCCAATT
TGGTGATGCTGCGGCCCTGCGTCTGCAGGCGTTAGATGAGCAACGTACCCTTTGGCAAAGTCAGTACCAGAATTACGCGC
GACAGCGAGACCAGATCAATTCCGCAGCCATAGACATTGCGGACAAACAGAAGCAGTTACAGGCTTTGCGTAGCAGATTA
TTTACCCACAGTGAACAACAGCGTGCAGCCGCGTTAGACCGTATGCAATAG

Upstream 100 bases:

>100_bases
TATATCGCAACCACGCTAACCGCCTGAAAAATGCAGGACTTTAACAAGCATTCCCTCAGAGGGTCGCTCTTTACAGGACC
CTCTGCATTGAGTCTGAGTC

Downstream 100 bases:

>100_bases
CCAACATAGATAGAAGAAACATCGTCAAACTAGCTCCTTGCGGTTGTTTCGCTGAGACCGTCTGAGCACGGTAAAAATAA
TCCCATTCAAGCTTTCCCTC

Product: lipase foldase

Products: NA

Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSL
TIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKN
SGDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ
RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRL
FTHSEQQRAAALDRMQ

Sequences:

>Translated_336_residues
MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSL
TIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKN
SGDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ
RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRL
FTHSEQQRAAALDRMQ
>Mature_335_residues
TRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTLNLAQMLTNTSLAGTQVPGSLT
IDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHWARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKNS
GDIRNKLEQRQKLRNDTFGTDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQR
LTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQINSAAIDIADKQKQLQALRSRLF
THSEQQRAAALDRMQ

Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]

COG id: COG5380

COG function: function code O; Lipase chaperone

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase chaperone family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004961 [H]

Pfam domain/function: PF03280 Lipase_chap [H]

EC number: NA

Molecular weight: Translated: 38048; Mature: 37917

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHH
NLAQMLTNTSLAGTQVPGSLTIDALGRLIPDNHSKAVMDYFLSLSGEMPDASIRRLLEHW
HHHHHHHCCCCCCCCCCCCEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
ARHNAGQLAAADLLTLFDQYHYYRSRLANSDYAAHYLNKNSGDIRNKLEQRQKLRNDTFG
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCC
TDIAAALFADEDRYDRVSLQRNQILTSRRSEKEKADALQELRKALPEALAKQHQRQYDLQ
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLTAHEQSIKQQGANAADLYAFRQRQFGDAAALRLQALDEQRTLWQSQYQNYARQRDQIN
HHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAAIDIADKQKQLQALRSRLFTHSEQQRAAALDRMQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TRTFVLLIAIVLSASSLFWGFQHLTASPLPLPTASNTNTQISTTYTATIEAGRAAKQTL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHHHHH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HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216267 [H]