| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is nadD [H]
Identifier: 110834813
GI number: 110834813
Start: 2232731
End: 2233408
Strand: Direct
Name: nadD [H]
Synonym: ABO_1952
Alternate gene names: 110834813
Gene position: 2232731-2233408 (Clockwise)
Preceding gene: 110834812
Following gene: 110834814
Centisome position: 71.56
GC content: 58.55
Gene sequence:
>678_bases TTGCATAACGTCCAACATGCGGCGTCCGGCGGCCGGCCTTTGGTTCTCTTTGGCGGCACCTTTGATCCGGTTCACCGGGC GCACATCAGTGCGGCCCGAGCTGTATCTAAGGTGCTCAATGACGCCCCTGTGCACCTGCTCCCTAATGCGGTTCCCCCTC ACCGGCCGCAACCGTTGGCCGATGGTGAGCAGCGCTTGCGTATGCTGGAGCTGGCCTGTGCTGACCACCCACAGTTGCAC CCGGATGGTTGGGAATTGGCACAGCCCGGCCCCAGCTACAGCCTGGTCACACTGCAGCATTTTCGCAAACAACACCCAGA CCGGCCGCTCGTGTTTATGATCGGCGCCGACAGCTTTGCCAACCTGCATCAGTGGCACCAATGGCGAGATTACACCAACC TGTGTCACCTGGCAGTGGTACCTCGCCCAAACAGCCCGCTGGCAGATAATGCCGTCTTAGAGGCGTTTCCAGAAACCGAT GCCCACGGCCTGGCACAGCAACCCTACGGCTTACGACTAATGCTCAAACGCCCATTTCTGGATGTCTCTGCCACCGCCAT TCGTCAGGCGCTCGCAAAAAAAGGGCACTGTCCCGCGTTAGATGACGCCGTGATTACGCATATTCACCGCCACGACCTGT ATAATGTGGCCGAACATACCCCTTTTAACCAATCATGA
Upstream 100 bases:
>100_bases TGACCAGCCAGAAATGGGTGGTGTTGGGTGATGGGCATATACGGCTGTAAACGCCAGATGCAGGATGCCGGATACCTAAC GCCAAACACGGAGGCGTGCT
Downstream 100 bases:
>100_bases GGCCCCATGAGCGCTGACACTCCGCTACTGCAACTGGTCATCGACGCCCTGGAAGAAGTCAAAGCCCAAAACATCACCCC GCTGGATGTACGTGAAATCA
Product: nicotinate-nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS
Sequences:
>Translated_225_residues MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS >Mature_225_residues MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLADGEQRLRMLELACADHPQLH PDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFANLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETD AHGLAQQPYGLRLMLKRPFLDVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=206, Percent_Identity=38.8349514563107, Blast_Score=134, Evalue=5e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 25036; Mature: 25036
Theoretical pI: Translated: 7.59; Mature: 7.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC DGEQRLRMLELACADHPQLHPDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEECCCHHH NLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETDAHGLAQQPYGLRLMLKRPFL HHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCC DVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MHNVQHAASGGRPLVLFGGTFDPVHRAHISAARAVSKVLNDAPVHLLPNAVPPHRPQPLA CCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCC DGEQRLRMLELACADHPQLHPDGWELAQPGPSYSLVTLQHFRKQHPDRPLVFMIGADSFA CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCEEEEECCCHHH NLHQWHQWRDYTNLCHLAVVPRPNSPLADNAVLEAFPETDAHGLAQQPYGLRLMLKRPFL HHHHHHHHHHHHCEEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCC DVSATAIRQALAKKGHCPALDDAVITHIHRHDLYNVAEHTPFNQS CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA