| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is lnt [H]
Identifier: 110834801
GI number: 110834801
Start: 2217027
End: 2218517
Strand: Direct
Name: lnt [H]
Synonym: ABO_1940
Alternate gene names: 110834801
Gene position: 2217027-2218517 (Clockwise)
Preceding gene: 110834799
Following gene: 110834802
Centisome position: 71.06
GC content: 58.08
Gene sequence:
>1491_bases ATGCGTGATCGTCTGCTGGCTCTGATTGCCGGCCTGCTCTTCCCCCTAGCTTTTGCCCCCTATGATCTCTGGCCTCTGTT GTTTGTCAGCATCGGGCTGGGCTACTGGTGCCAGCAGCAGGCGAGCTCTGCCCGCGAAGCATTACTACGTGGCTGGCTGT ACGGGCTGGGCATGTTCGCTTTCGGTATTTCCTGGGTGCATGTTTCCATGCACGACTACGGCTTCATGCCGCTGTGGATG GCGATTCCGTTCACCGGGCTATTTGCGGCTTTCCTGGCCTTGTTTTACGGCCTCACTTTTTACGCCAGCTGGCGGCTGGG ACGTTCGGCTCTGGCCTTTGCCGGTATCTGGTTACTGCTGGACTGGCTGCGTGGCGTACTCCTGACCGGTTTCCCCTGGC TATATGCTGGCTACGCCCTGATCGACTCCCCTTTCGCCACTTTGGCCCCCATAGGCGGAGTCTGGCTGTTGACCCTTAGC GCGGTGTTGATCAGCGCCTGTTTGATTCGCCTGACTAACTGGCGCAGAGGCGGGTACGCCGGGCTGGTCGCATCCAGCGC CCTGCTGATTCTCACTGCGGCCTCTCACACTCTCACCTTCACCCAACCCAGCGGGTCTGCCCAGAAAGTTGCGCTGGTAC AGGGCAATATCCCCCAGGACCTCAAATGGCAGCTATCCATGCGAGAACGAACCCAGCAGATCTATCAAGACCTGACACGG GATATTCCCGCCGACACCCTGGTAGTTTGGCCAGAATCAGCGCTCACTAATTTTTACCAAAACGTATCCGAATTCGTAGA ACAAGAAGGACAAAAAATCGCCGAACGTAACGGCGGTTTCATCACCGGGGTTCCCTGGCGTACGGTCAGCAATAGTGGCG TGACCTACCACAACAGCATTGCCTCCATCCCGCTTGATCCCGGCGATGGCCGCCAACGGGTTTACCACAAACAAAAACTG GTCCCGTTTGGCGAATACGTGCCCATGCAATCGCTTATACGCGGGCTAATTCCATTTTTCGATTTACCCATGTCTGGCTT TACCCCCGGAAAATCCAGCCAACCCAATCTGACGGCGCTGGGGCACAGCATCGCCCCGTTTATCTGCTATGAAATTCTCT ATCCGGAACTGGTGGCCGACCGCAGCCACGACGCCGATGTGCTGCTGACCATCAGCAACGATGCCTGGTTCGGCACCTCT GCCGGCCCCTTGCAGCATTTTCAGATGGCCCGTATGCGTGCCCTGGAAACCGGCCGATGGTTGCTACGCGGCACCAATAA TGGGGTCACCGCAGTGATCAACGAGCACGGCAAGGTAGTGGATGCCCTGCCACAATTCGAGCGCGACGTGCTGCTCAGCC AGTACCAGCCCCGCCAGGGCACCACTCCATTCATGGCCACGGGGGTATGGCCCTGGCTACTGCTGGCCTGCCTAATAGTG TGGGCAGGGTGGCGGGGCCGAATCAGGACATCGCCCAATATTCCATTATGA
Upstream 100 bases:
>100_bases GTTTAAAAGCATATTTTTCTGCTACTTTATTCGTATTATTGCATTGACTCTAGTCCAAACTGCCAGGCGGCCTGCTCGCC AGTACGAAACGAGGATATCC
Downstream 100 bases:
>100_bases TATATGCTTATTCCTTAATTTGACTTTGTTCTCCGGCCAGCCTATAACAGTGGCATTGTCGCATCCTAACGGGAGAGCAC CATGTCACGCCCTGAAGTCA
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase [H]
Number of amino acids: Translated: 496; Mature: 496
Protein sequence:
>496_residues MRDRLLALIAGLLFPLAFAPYDLWPLLFVSIGLGYWCQQQASSAREALLRGWLYGLGMFAFGISWVHVSMHDYGFMPLWM AIPFTGLFAAFLALFYGLTFYASWRLGRSALAFAGIWLLLDWLRGVLLTGFPWLYAGYALIDSPFATLAPIGGVWLLTLS AVLISACLIRLTNWRRGGYAGLVASSALLILTAASHTLTFTQPSGSAQKVALVQGNIPQDLKWQLSMRERTQQIYQDLTR DIPADTLVVWPESALTNFYQNVSEFVEQEGQKIAERNGGFITGVPWRTVSNSGVTYHNSIASIPLDPGDGRQRVYHKQKL VPFGEYVPMQSLIRGLIPFFDLPMSGFTPGKSSQPNLTALGHSIAPFICYEILYPELVADRSHDADVLLTISNDAWFGTS AGPLQHFQMARMRALETGRWLLRGTNNGVTAVINEHGKVVDALPQFERDVLLSQYQPRQGTTPFMATGVWPWLLLACLIV WAGWRGRIRTSPNIPL
Sequences:
>Translated_496_residues MRDRLLALIAGLLFPLAFAPYDLWPLLFVSIGLGYWCQQQASSAREALLRGWLYGLGMFAFGISWVHVSMHDYGFMPLWM AIPFTGLFAAFLALFYGLTFYASWRLGRSALAFAGIWLLLDWLRGVLLTGFPWLYAGYALIDSPFATLAPIGGVWLLTLS AVLISACLIRLTNWRRGGYAGLVASSALLILTAASHTLTFTQPSGSAQKVALVQGNIPQDLKWQLSMRERTQQIYQDLTR DIPADTLVVWPESALTNFYQNVSEFVEQEGQKIAERNGGFITGVPWRTVSNSGVTYHNSIASIPLDPGDGRQRVYHKQKL VPFGEYVPMQSLIRGLIPFFDLPMSGFTPGKSSQPNLTALGHSIAPFICYEILYPELVADRSHDADVLLTISNDAWFGTS AGPLQHFQMARMRALETGRWLLRGTNNGVTAVINEHGKVVDALPQFERDVLLSQYQPRQGTTPFMATGVWPWLLLACLIV WAGWRGRIRTSPNIPL >Mature_496_residues MRDRLLALIAGLLFPLAFAPYDLWPLLFVSIGLGYWCQQQASSAREALLRGWLYGLGMFAFGISWVHVSMHDYGFMPLWM AIPFTGLFAAFLALFYGLTFYASWRLGRSALAFAGIWLLLDWLRGVLLTGFPWLYAGYALIDSPFATLAPIGGVWLLTLS AVLISACLIRLTNWRRGGYAGLVASSALLILTAASHTLTFTQPSGSAQKVALVQGNIPQDLKWQLSMRERTQQIYQDLTR DIPADTLVVWPESALTNFYQNVSEFVEQEGQKIAERNGGFITGVPWRTVSNSGVTYHNSIASIPLDPGDGRQRVYHKQKL VPFGEYVPMQSLIRGLIPFFDLPMSGFTPGKSSQPNLTALGHSIAPFICYEILYPELVADRSHDADVLLTISNDAWFGTS AGPLQHFQMARMRALETGRWLLRGTNNGVTAVINEHGKVVDALPQFERDVLLSQYQPRQGTTPFMATGVWPWLLLACLIV WAGWRGRIRTSPNIPL
Specific function: Transfers the fatty acyl group on membrane lipoproteins [H]
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain [H]
Homologues:
Organism=Escherichia coli, GI1786878, Length=499, Percent_Identity=40.2805611222445, Blast_Score=309, Evalue=2e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004563 - InterPro: IPR003010 [H]
Pfam domain/function: PF00795 CN_hydrolase [H]
EC number: 2.3.1.- [C]
Molecular weight: Translated: 55223; Mature: 55223
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: PS50263 CN_HYDROLASE ; PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDRLLALIAGLLFPLAFAPYDLWPLLFVSIGLGYWCQQQASSAREALLRGWLYGLGMFA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGISWVHVSMHDYGFMPLWMAIPFTGLFAAFLALFYGLTFYASWRLGRSALAFAGIWLLL HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH DWLRGVLLTGFPWLYAGYALIDSPFATLAPIGGVWLLTLSAVLISACLIRLTNWRRGGYA HHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH GLVASSALLILTAASHTLTFTQPSGSAQKVALVQGNIPQDLKWQLSMRERTQQIYQDLTR HHHHHCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DIPADTLVVWPESALTNFYQNVSEFVEQEGQKIAERNGGFITGVPWRTVSNSGVTYHNSI CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCEEECCE ASIPLDPGDGRQRVYHKQKLVPFGEYVPMQSLIRGLIPFFDLPMSGFTPGKSSQPNLTAL EECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH GHSIAPFICYEILYPELVADRSHDADVLLTISNDAWFGTSAGPLQHFQMARMRALETGRW HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE LLRGTNNGVTAVINEHGKVVDALPQFERDVLLSQYQPRQGTTPFMATGVWPWLLLACLIV EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WAGWRGRIRTSPNIPL HCCCCCCEECCCCCCC >Mature Secondary Structure MRDRLLALIAGLLFPLAFAPYDLWPLLFVSIGLGYWCQQQASSAREALLRGWLYGLGMFA CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGISWVHVSMHDYGFMPLWMAIPFTGLFAAFLALFYGLTFYASWRLGRSALAFAGIWLLL HHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH DWLRGVLLTGFPWLYAGYALIDSPFATLAPIGGVWLLTLSAVLISACLIRLTNWRRGGYA HHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCH GLVASSALLILTAASHTLTFTQPSGSAQKVALVQGNIPQDLKWQLSMRERTQQIYQDLTR HHHHHCCEEEEEECCCEEEEECCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH DIPADTLVVWPESALTNFYQNVSEFVEQEGQKIAERNGGFITGVPWRTVSNSGVTYHNSI CCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEECCCCCEEECCE ASIPLDPGDGRQRVYHKQKLVPFGEYVPMQSLIRGLIPFFDLPMSGFTPGKSSQPNLTAL EECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH GHSIAPFICYEILYPELVADRSHDADVLLTISNDAWFGTSAGPLQHFQMARMRALETGRW HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCE LLRGTNNGVTAVINEHGKVVDALPQFERDVLLSQYQPRQGTTPFMATGVWPWLLLACLIV EEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH WAGWRGRIRTSPNIPL HCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12928499 [H]