| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is blh [H]
Identifier: 110834802
GI number: 110834802
Start: 2218599
End: 2219465
Strand: Direct
Name: blh [H]
Synonym: ABO_1941
Alternate gene names: 110834802
Gene position: 2218599-2219465 (Clockwise)
Preceding gene: 110834801
Following gene: 110834803
Centisome position: 71.11
GC content: 55.59
Gene sequence:
>867_bases ATGTCACGCCCTGAAGTCAAAGCGTTCTTTGACCACGACACTAATACAATCAGCTATGTCGTTACCGACCCGCAAAGCCG CCACTGCGCCATCGTAGACTCTGTACTGGATTACGACCCCAGCGCGGGTCGCACCCGACACACCAGTGCCGAGCAAATCG TTAACTACGTGAAACAAGAAAGTCTCACCGTGGATTGGCTGCTGGAAACCCACGTCCATGCTGACCACCTTTCCGCCGCA CCTTGGATTCAACAACAGGTAGGTGGCCAGCTGGCCATTGGCGAGCACATCAGCACCGTGCAGGAAACCTTTAGCAAGAT CTTTAACGCCGGCACCGAGTTTGCCCGCGACGGTAGTCAGTTCGATCATCTGTTCAAGGATGGTGAGACTTACAAAGTAG GGAATCTGCAGGCTCGAGCCATTCACACGCCTGGGCACACCCCGGCTTGCATGAGCCACGTGATCGGCGATTCGGTCTTC GTCGGGGACACCTTGTTCATGCCAGACTACGGCACCGCCCGCTGCGATTTTCCCGGTGGAGATGCTCGCACTCTATACCA TTCCATTCAGAAGTTACTCGCTCTGCCGGACGAAACCCGCATGTTTCTGTGCCACGACTACCTACCAGAGAACCGCGAAG AATTCGTTTGGGAAACCACCGTGGGTGATCAGCGCAAACACAACATTCATGTTCATGAAGGCGTCAGCGAAGAAGAGTTC GTCACCATGCGAGAAACCCGCGATGCCTCCCTGGACATGCCGCGCCTAATCCTGCCATCGGTGCAGATCAACATGCGCGC CGGGCACCTTCCTCCCGAGGAAGACAATGGCATCAGCTACCTGAAAATCCCCCTGAACGCACTCTAA
Upstream 100 bases:
>100_bases GCCCAATATTCCATTATGATATATGCTTATTCCTTAATTTGACTTTGTTCTCCGGCCAGCCTATAACAGTGGCATTGTCG CATCCTAACGGGAGAGCACC
Downstream 100 bases:
>100_bases GAGAATGCCCATGCCAGTTGATGACTCTGTCTGGGATGTGGTGATTGTGGGCGGCGGCGCTGCCGGCCTCGCGGCGGCGG CCAGCCTGCTCAAACGCAAG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSRPEVKAFFDHDTNTISYVVTDPQSRHCAIVDSVLDYDPSAGRTRHTSAEQIVNYVKQESLTVDWLLETHVHADHLSAA PWIQQQVGGQLAIGEHISTVQETFSKIFNAGTEFARDGSQFDHLFKDGETYKVGNLQARAIHTPGHTPACMSHVIGDSVF VGDTLFMPDYGTARCDFPGGDARTLYHSIQKLLALPDETRMFLCHDYLPENREEFVWETTVGDQRKHNIHVHEGVSEEEF VTMRETRDASLDMPRLILPSVQINMRAGHLPPEEDNGISYLKIPLNAL
Sequences:
>Translated_288_residues MSRPEVKAFFDHDTNTISYVVTDPQSRHCAIVDSVLDYDPSAGRTRHTSAEQIVNYVKQESLTVDWLLETHVHADHLSAA PWIQQQVGGQLAIGEHISTVQETFSKIFNAGTEFARDGSQFDHLFKDGETYKVGNLQARAIHTPGHTPACMSHVIGDSVF VGDTLFMPDYGTARCDFPGGDARTLYHSIQKLLALPDETRMFLCHDYLPENREEFVWETTVGDQRKHNIHVHEGVSEEEF VTMRETRDASLDMPRLILPSVQINMRAGHLPPEEDNGISYLKIPLNAL >Mature_287_residues SRPEVKAFFDHDTNTISYVVTDPQSRHCAIVDSVLDYDPSAGRTRHTSAEQIVNYVKQESLTVDWLLETHVHADHLSAAP WIQQQVGGQLAIGEHISTVQETFSKIFNAGTEFARDGSQFDHLFKDGETYKVGNLQARAIHTPGHTPACMSHVIGDSVFV GDTLFMPDYGTARCDFPGGDARTLYHSIQKLLALPDETRMFLCHDYLPENREEFVWETTVGDQRKHNIHVHEGVSEEEFV TMRETRDASLDMPRLILPSVQINMRAGHLPPEEDNGISYLKIPLNAL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=266, Percent_Identity=27.4436090225564, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17538952, Length=268, Percent_Identity=24.2537313432836, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI221330176, Length=280, Percent_Identity=28.9285714285714, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32427; Mature: 32295
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPEVKAFFDHDTNTISYVVTDPQSRHCAIVDSVLDYDPSAGRTRHTSAEQIVNYVKQE CCCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH SLTVDWLLETHVHADHLSAAPWIQQQVGGQLAIGEHISTVQETFSKIFNAGTEFARDGSQ CCEEEEHHHHHCCHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHCCCHH FDHLFKDGETYKVGNLQARAIHTPGHTPACMSHVIGDSVFVGDTLFMPDYGTARCDFPGG HHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCEEECCEEECCCCCCEECCCCCC DARTLYHSIQKLLALPDETRMFLCHDYLPENREEFVWETTVGDQRKHNIHVHEGVSEEEF CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEEECCCCCCCCCEEEEECCCCHHHE VTMRETRDASLDMPRLILPSVQINMRAGHLPPEEDNGISYLKIPLNAL EEHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure SRPEVKAFFDHDTNTISYVVTDPQSRHCAIVDSVLDYDPSAGRTRHTSAEQIVNYVKQE CCCCCEEEECCCCCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH SLTVDWLLETHVHADHLSAAPWIQQQVGGQLAIGEHISTVQETFSKIFNAGTEFARDGSQ CCEEEEHHHHHCCHHHCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCHHHHCCCHH FDHLFKDGETYKVGNLQARAIHTPGHTPACMSHVIGDSVFVGDTLFMPDYGTARCDFPGG HHHHHCCCCEEEECCEEEEEEECCCCCHHHHHHHHCCCEEECCEEECCCCCCEECCCCCC DARTLYHSIQKLLALPDETRMFLCHDYLPENREEFVWETTVGDQRKHNIHVHEGVSEEEF CHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHEEEECCCCCCCCCEEEEECCCCHHHE VTMRETRDASLDMPRLILPSVQINMRAGHLPPEEDNGISYLKIPLNAL EEHHHCCCCCCCCCCEECCCEEEEEECCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]