| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is 110834799
Identifier: 110834799
GI number: 110834799
Start: 2213881
End: 2215269
Strand: Direct
Name: 110834799
Synonym: ABO_1938
Alternate gene names: NA
Gene position: 2213881-2215269 (Clockwise)
Preceding gene: 110834798
Following gene: 110834801
Centisome position: 70.95
GC content: 60.48
Gene sequence:
>1389_bases ATGACGACACCAACCACGGCGCAGACAACGGCTGACCCAACCGCGCCTGCCTGGCGCAACGGCCCCTGGGTAATGGCCTT AGTGGCCATTGCCCTGATCGCCGGCCAACTCTTCAACAACGCGAACACCCCCCAACCGGTTTTAAACTGGTACTCAAGCA GCGGCCTGAAAAACCTGGAATGGAACAACTACCTTTCCTGGCTCCGCTTCAATAATCAAAGCGCTCTGTCGCAACAATTG GAAGCGCGCGCGGCCATGGACCCACACGCCTACAGCGCCGCCCTGTTCGCCGATGATTTTGTCGCAGACAGCCAGCGCCG CGCCCATGATTTCTGGTCGCCCGCTGAAACGGAGCAATGGAAGCGCCTGCGCGAGCAAATTCCCGCACAGGTTGCCACCA GCAACCTGTACCGCTGGGGTTTGCCCAACTCTTCGCCACGCCCCGCCCGTTTCTTTACCGCCCCTTTCACCGGAGGCTCA CTCTGGCTAACCCTGGCCGCGGTGCTTCTGCTGGCGCCACTGGCCTCCACTCTGGAGCGTCGGCTCGGCCACGGCCGGGT GCTCGCACTATGGATCCTCGGCTGCCTGGTCAGTGGCGTCGGCTACCTGCTGCTAGCCAGCCCCGGGCAAGTTCCTTTCC ACGGCCCCGCAGCGCCTTTGCTGATTTGGTTCGGCGCGTTCTTTGGCCTGCAGCATAGCCCCCTGCAACTCCCCATTTGG CACCCCAAACATAAACAATGGCAACGCCGGCCCGTTTCCCCCTACACCCTGCTGCCCTTGCCCATAGCCGTCATGGCCGC TGTAGCGCTGTTCAGCACACCACTTTTAGCTAATCTCAGTGCCGGCATTGCCGCTTTTATCGCAGGCCTACTGTTAGTGC AGATCATGCAGCCACAGCCCATCGAGCCAGAACAGCATGACAACAGCCCCATGGACCCGCAGCAACTGTCCTCACTCACT CGCGGTTGGGATGCACTGGGGCAATTAGACGGCGATGCCGCCCATGCGGCCTTCGCACAGGTTCTTACCCGCGAACCGGA CCATTTCGACGCGCTCACCGGGCAATTCACCGCGCAGCAATTACTCAACGATAACGCCTCCTGGGAGAGCACCGCCCAGC AACTATTCTGTTCTCCTGCAACGGAAAAAGGACAAGCCACTCAGGTGGCGCGTTGTTGGCAGCAGTACCAGCAACGCAGC GGCGCACCGTTGTCGGCCGCAGTTGGCTGGACGCTACTGAAAACCTTAACCCGGGCCGAGGAATTTCAACCAGCAGAGAA ATTGGCACGGCAACTGGATGACCATTCGCTCAAGGCAGACGCCATCGCCCAACTGCGGGCCAGACTGATTCAAGAAGGAT TAACACACCGGGCAAAAACGCTGGCGTGA
Upstream 100 bases:
>100_bases GATGAAAGTATCACTCTGGATGGCTTCCGCGTCACCGTGCTCAGTGCCGACGGCCGCACAATAAGACTGCTACGGGTAAC ACCGCCGGGGGATAACGATA
Downstream 100 bases:
>100_bases CGACTTAACACCTGGCGCCTCTTGCCCAACACTCGACACTCGACACTCGACACCTTTGGAAATCGGAAACACACCCGTCA CCCCCAGGCTAGCCGACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MTTPTTAQTTADPTAPAWRNGPWVMALVAIALIAGQLFNNANTPQPVLNWYSSSGLKNLEWNNYLSWLRFNNQSALSQQL EARAAMDPHAYSAALFADDFVADSQRRAHDFWSPAETEQWKRLREQIPAQVATSNLYRWGLPNSSPRPARFFTAPFTGGS LWLTLAAVLLLAPLASTLERRLGHGRVLALWILGCLVSGVGYLLLASPGQVPFHGPAAPLLIWFGAFFGLQHSPLQLPIW HPKHKQWQRRPVSPYTLLPLPIAVMAAVALFSTPLLANLSAGIAAFIAGLLLVQIMQPQPIEPEQHDNSPMDPQQLSSLT RGWDALGQLDGDAAHAAFAQVLTREPDHFDALTGQFTAQQLLNDNASWESTAQQLFCSPATEKGQATQVARCWQQYQQRS GAPLSAAVGWTLLKTLTRAEEFQPAEKLARQLDDHSLKADAIAQLRARLIQEGLTHRAKTLA
Sequences:
>Translated_462_residues MTTPTTAQTTADPTAPAWRNGPWVMALVAIALIAGQLFNNANTPQPVLNWYSSSGLKNLEWNNYLSWLRFNNQSALSQQL EARAAMDPHAYSAALFADDFVADSQRRAHDFWSPAETEQWKRLREQIPAQVATSNLYRWGLPNSSPRPARFFTAPFTGGS LWLTLAAVLLLAPLASTLERRLGHGRVLALWILGCLVSGVGYLLLASPGQVPFHGPAAPLLIWFGAFFGLQHSPLQLPIW HPKHKQWQRRPVSPYTLLPLPIAVMAAVALFSTPLLANLSAGIAAFIAGLLLVQIMQPQPIEPEQHDNSPMDPQQLSSLT RGWDALGQLDGDAAHAAFAQVLTREPDHFDALTGQFTAQQLLNDNASWESTAQQLFCSPATEKGQATQVARCWQQYQQRS GAPLSAAVGWTLLKTLTRAEEFQPAEKLARQLDDHSLKADAIAQLRARLIQEGLTHRAKTLA >Mature_461_residues TTPTTAQTTADPTAPAWRNGPWVMALVAIALIAGQLFNNANTPQPVLNWYSSSGLKNLEWNNYLSWLRFNNQSALSQQLE ARAAMDPHAYSAALFADDFVADSQRRAHDFWSPAETEQWKRLREQIPAQVATSNLYRWGLPNSSPRPARFFTAPFTGGSL WLTLAAVLLLAPLASTLERRLGHGRVLALWILGCLVSGVGYLLLASPGQVPFHGPAAPLLIWFGAFFGLQHSPLQLPIWH PKHKQWQRRPVSPYTLLPLPIAVMAAVALFSTPLLANLSAGIAAFIAGLLLVQIMQPQPIEPEQHDNSPMDPQQLSSLTR GWDALGQLDGDAAHAAFAQVLTREPDHFDALTGQFTAQQLLNDNASWESTAQQLFCSPATEKGQATQVARCWQQYQQRSG APLSAAVGWTLLKTLTRAEEFQPAEKLARQLDDHSLKADAIAQLRARLIQEGLTHRAKTLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50810; Mature: 50679
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPTTAQTTADPTAPAWRNGPWVMALVAIALIAGQLFNNANTPQPVLNWYSSSGLKNLE CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC WNNYLSWLRFNNQSALSQQLEARAAMDPHAYSAALFADDFVADSQRRAHDFWSPAETEQW HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHH KRLREQIPAQVATSNLYRWGLPNSSPRPARFFTAPFTGGSLWLTLAAVLLLAPLASTLER HHHHHHCCHHHHHCCCEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RLGHGRVLALWILGCLVSGVGYLLLASPGQVPFHGPAAPLLIWFGAFFGLQHSPLQLPIW HHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HPKHKQWQRRPVSPYTLLPLPIAVMAAVALFSTPLLANLSAGIAAFIAGLLLVQIMQPQP CCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IEPEQHDNSPMDPQQLSSLTRGWDALGQLDGDAAHAAFAQVLTREPDHFDALTGQFTAQQ CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLNDNASWESTAQQLFCSPATEKGQATQVARCWQQYQQRSGAPLSAAVGWTLLKTLTRAE HHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EFQPAEKLARQLDDHSLKADAIAQLRARLIQEGLTHRAKTLA HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TTPTTAQTTADPTAPAWRNGPWVMALVAIALIAGQLFNNANTPQPVLNWYSSSGLKNLE CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCC WNNYLSWLRFNNQSALSQQLEARAAMDPHAYSAALFADDFVADSQRRAHDFWSPAETEQW HHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHH KRLREQIPAQVATSNLYRWGLPNSSPRPARFFTAPFTGGSLWLTLAAVLLLAPLASTLER HHHHHHCCHHHHHCCCEECCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH RLGHGRVLALWILGCLVSGVGYLLLASPGQVPFHGPAAPLLIWFGAFFGLQHSPLQLPIW HHCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC HPKHKQWQRRPVSPYTLLPLPIAVMAAVALFSTPLLANLSAGIAAFIAGLLLVQIMQPQP CCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC IEPEQHDNSPMDPQQLSSLTRGWDALGQLDGDAAHAAFAQVLTREPDHFDALTGQFTAQQ CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLNDNASWESTAQQLFCSPATEKGQATQVARCWQQYQQRSGAPLSAAVGWTLLKTLTRAE HHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH EFQPAEKLARQLDDHSLKADAIAQLRARLIQEGLTHRAKTLA HCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA