Definition Alcanivorax borkumensis SK2 chromosome, complete genome.
Accession NC_008260
Length 3,120,143

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The map label for this gene is 110834780

Identifier: 110834780

GI number: 110834780

Start: 2196355

End: 2196945

Strand: Direct

Name: 110834780

Synonym: ABO_1919

Alternate gene names: NA

Gene position: 2196355-2196945 (Clockwise)

Preceding gene: 110834779

Following gene: 110834781

Centisome position: 70.39

GC content: 55.5

Gene sequence:

>591_bases
ATGACATCATCAAAGGTTCCTTTTTCGCAAGCAGCGGAAAACAACAAAGGCCCGATTCTCCAAGTTTTGCAGCAACACTG
TCAGGCCCCCGGGACGCTGCTGGAAATTGGGGCCGGCACCGGACAGCATGCCGCTTGGCTGTCTGCACAGCTACCCCATT
TGCAATGGCAGCCCTCTGACGTGGCGCAGAACCTCCCAACCATTCGCCACTGGCTAGGCCAGACACACAGCCTGGCAAAT
GCCCCGTTAGCCCTGGATGTGAGCGACCAATGGCCGATTGGTCCTTTTGATTATCTGTTCACGGCGAATACGTTTCACAT
CATGCCGCAATCACTGGTCGCCCATTGCATCGCTGAAGGGTGCCGGCATCTCAACACAGAGGGATTGTTCATGGTCTACG
GCCCCTTCAACTACGATGATCAGTTCACCAGTGATTCCAATCGACAGTTTGAACGTTGGCTGAAATCCACTGATACGCAG
CGGGGGATCCGCGACAAGGAATGGGTAGAGCAGGAGTTTGCCCAGCACGGTCGGCAATGTCTTGCGGACCATGCCATGCC
AGCGAATAACCGGGTGCTGGTGTTCGGGTAA

Upstream 100 bases:

>100_bases
AGAAATACATGAACAAAAGTAAGGGGTGAGGAAATAACGCGTTTCCCTTGCCAAAAAAGGCCGTTGATGATGCCATGACC
TCTCACTCACAGGAGCAGCC

Downstream 100 bases:

>100_bases
AACGGCATGCTGAAAGTCAACGAAAGCGAATACCGCACATGCTCGGTTTCGAGTGAATAACCCCGAGCCTCATGGCCATC
ACGCCAATGATACATACCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTSSKVPFSQAAENNKGPILQVLQQHCQAPGTLLEIGAGTGQHAAWLSAQLPHLQWQPSDVAQNLPTIRHWLGQTHSLAN
APLALDVSDQWPIGPFDYLFTANTFHIMPQSLVAHCIAEGCRHLNTEGLFMVYGPFNYDDQFTSDSNRQFERWLKSTDTQ
RGIRDKEWVEQEFAQHGRQCLADHAMPANNRVLVFG

Sequences:

>Translated_196_residues
MTSSKVPFSQAAENNKGPILQVLQQHCQAPGTLLEIGAGTGQHAAWLSAQLPHLQWQPSDVAQNLPTIRHWLGQTHSLAN
APLALDVSDQWPIGPFDYLFTANTFHIMPQSLVAHCIAEGCRHLNTEGLFMVYGPFNYDDQFTSDSNRQFERWLKSTDTQ
RGIRDKEWVEQEFAQHGRQCLADHAMPANNRVLVFG
>Mature_195_residues
TSSKVPFSQAAENNKGPILQVLQQHCQAPGTLLEIGAGTGQHAAWLSAQLPHLQWQPSDVAQNLPTIRHWLGQTHSLANA
PLALDVSDQWPIGPFDYLFTANTFHIMPQSLVAHCIAEGCRHLNTEGLFMVYGPFNYDDQFTSDSNRQFERWLKSTDTQR
GIRDKEWVEQEFAQHGRQCLADHAMPANNRVLVFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=199, Percent_Identity=33.1658291457286, Blast_Score=94, Evalue=8e-20,
Organism=Caenorhabditis elegans, GI71998087, Length=198, Percent_Identity=29.7979797979798, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28574095, Length=196, Percent_Identity=29.0816326530612, Blast_Score=84, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22018; Mature: 21887

Theoretical pI: Translated: 6.33; Mature: 6.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSKVPFSQAAENNKGPILQVLQQHCQAPGTLLEIGAGTGQHAAWLSAQLPHLQWQPSD
CCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHH
VAQNLPTIRHWLGQTHSLANAPLALDVSDQWPIGPFDYLFTANTFHIMPQSLVAHCIAEG
HHHCCHHHHHHHCCHHHHCCCCEEEECCCCCCCCCHHHHEECCHHEECHHHHHHHHHHHH
CRHLNTEGLFMVYGPFNYDDQFTSDSNRQFERWLKSTDTQRGIRDKEWVEQEFAQHGRQC
HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
LADHAMPANNRVLVFG
HHHCCCCCCCEEEEEC
>Mature Secondary Structure 
TSSKVPFSQAAENNKGPILQVLQQHCQAPGTLLEIGAGTGQHAAWLSAQLPHLQWQPSD
CCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCCCHH
VAQNLPTIRHWLGQTHSLANAPLALDVSDQWPIGPFDYLFTANTFHIMPQSLVAHCIAEG
HHHCCHHHHHHHCCHHHHCCCCEEEECCCCCCCCCHHHHEECCHHEECHHHHHHHHHHHH
CRHLNTEGLFMVYGPFNYDDQFTSDSNRQFERWLKSTDTQRGIRDKEWVEQEFAQHGRQC
HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHH
LADHAMPANNRVLVFG
HHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA