| Definition | Alcanivorax borkumensis SK2 chromosome, complete genome. |
|---|---|
| Accession | NC_008260 |
| Length | 3,120,143 |
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The map label for this gene is rhlB [H]
Identifier: 110834781
GI number: 110834781
Start: 2197346
End: 2198614
Strand: Direct
Name: rhlB [H]
Synonym: ABO_1920
Alternate gene names: 110834781
Gene position: 2197346-2198614 (Clockwise)
Preceding gene: 110834780
Following gene: 110834782
Centisome position: 70.42
GC content: 54.85
Gene sequence:
>1269_bases ATGCAAAAAGACAAAGCAAGCTCCTGGAGCCTGGAGCAATTTCAGGTTCCGGAAAAAGAAGGCGAACGCCGCTTTCACGA CTTTGATCTGCATCTGGACCTGATGCACGGCATCGCCGATTCGGGCTTCCAGTACTGCACGCCTATTCAGGCTGAAGTCC TGGAACATACCCTCGCTGGCGCCGATGCCATCGGCCGGGCCCAAACGGGTACCGGCAAGACAGCCGCTTTCCTGATCACT GTAATAAACGATTTGCTCAAACATCCTATCGATGTCCAACGCTTTGCCGGTGAGCCTCGCGCCCTGATCGTGGCCCCCAC CCGAGAACTGGCCATGCAGATTGAGAAGGACGCCAACATACTGACCAAGTACACCGACCTTCAAGTAATGAGTGTGGTGG GCGGCATGAACTTCAATCGGCAACAGGAACGGCTGCAAAACAAACTGATTGATATCTTAGTGGCCACCCCCGGTCGTCTT CTCGATTTCGCCAAACGCCGCGATCTGTGGCTGGACCGGGTCGAGTTTCTGGTGTTGGATGAAGCTGATCGCATGCTGGA CATGGGCTTCATTCCCGACGTGAAACGCATTGTCGGCATGACGCCGAAAAGCCAGTATCGCCAAACTCAACTGTTCTCTG CCACATTCAATGACGATGTGATGAACCTCTCCCGCCGCTGGACGCAAGATGCTGAAATCGTGGAGATAGAGCCAACCCAA GTCACCACTGATACCGTAGAGCAAAAGGTCTACATCACTAATACAGACGACAAGTTCAAGCTGCTCTATAACCTCATTAC CGGCATGAACATGGACAAGGTCATCGTATTTGCCAACCGTCGAGACATTACTCGCCGGGTGTGCGACCGGCTACAAAAGC GGGGGCTTAAAGTCTCCCTGATTTCCGGCGACGTCCCACAAACTCAACGAAGCAAAACACTGGAGCGCTTCCGAGCCGGC GACTTGCAAGTGCTTATTGCCACGGACGTGGCCGGCCGCGGCATCCACATTGATGGCGTCTCTCACGTAGTGAATTACAA TCTGCCTGAAGATCCGGAAGACTATGTGCACCGCATTGGTCGTACCGGTCGCGCTGGTGCCAGCGGTATGTCGATCAGCT TCGCCTGTGAAGATGACGCCTTCCTGCTACCAGAGCTGGAAAACGCCATCGGCATGAAACTGGAATGCGAATACCCCCCC GCCGACCTGCTGGCGGAAAGGGAGAGGTCAGCCTCCGCGAAAGCGCCAGACGCAGAGAAAAAGGACTGA
Upstream 100 bases:
>100_bases CTACAATATGACATTTGGAGCCACCTCCGAAACCTTGCCAAACAGGGCCATAAAGGTGGCTACACTCGCAAACTCTCTCG CATTCAGACTGAGCGAATAC
Downstream 100 bases:
>100_bases CCATGGCAACGCGAATCAGCCCTACGCAGGGAAAAGCCCTATTTGATCAAGGTAACACTCTGTTCATCGACATCCGCGAC CCGGCAAGTTTTGCTGCAGG
Product: ATP-dependent RNA helicase RhlB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAGADAIGRAQTGTGKTAAFLIT VINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANILTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRL LDFAKRRDLWLDRVEFLVLDEADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSLISGDVPQTQRSKTLERFRAG DLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIGRTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPP ADLLAERERSASAKAPDAEKKD
Sequences:
>Translated_422_residues MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAGADAIGRAQTGTGKTAAFLIT VINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANILTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRL LDFAKRRDLWLDRVEFLVLDEADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSLISGDVPQTQRSKTLERFRAG DLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIGRTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPP ADLLAERERSASAKAPDAEKKD >Mature_422_residues MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAGADAIGRAQTGTGKTAAFLIT VINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANILTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRL LDFAKRRDLWLDRVEFLVLDEADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSLISGDVPQTQRSKTLERFRAG DLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIGRTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPP ADLLAERERSASAKAPDAEKKD
Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI222352149, Length=406, Percent_Identity=37.9310344827586, Blast_Score=243, Evalue=3e-64, Organism=Homo sapiens, GI41327771, Length=404, Percent_Identity=37.3762376237624, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=36.2359550561798, Blast_Score=220, Evalue=1e-57, Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=36.2359550561798, Blast_Score=219, Evalue=4e-57, Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=36.5168539325843, Blast_Score=219, Evalue=5e-57, Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=36.5168539325843, Blast_Score=218, Evalue=7e-57, Organism=Homo sapiens, GI224593278, Length=384, Percent_Identity=35.15625, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=36.6847826086957, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=36.6847826086957, Blast_Score=216, Evalue=3e-56, Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=36.6847826086957, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI169881239, Length=377, Percent_Identity=36.0742705570292, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI13514809, Length=377, Percent_Identity=36.0742705570292, Blast_Score=216, Evalue=4e-56, Organism=Homo sapiens, GI55749865, Length=401, Percent_Identity=33.6658354114713, Blast_Score=214, Evalue=1e-55, Organism=Homo sapiens, GI7661920, Length=383, Percent_Identity=33.420365535248, Blast_Score=213, Evalue=2e-55, Organism=Homo sapiens, GI50659095, Length=399, Percent_Identity=35.3383458646617, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI148613856, Length=358, Percent_Identity=36.8715083798883, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI38201710, Length=358, Percent_Identity=36.8715083798883, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=35.2459016393443, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=35.2459016393443, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI20149629, Length=399, Percent_Identity=34.3358395989975, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=33.4224598930481, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI4758138, Length=358, Percent_Identity=36.0335195530726, Blast_Score=198, Evalue=9e-51, Organism=Homo sapiens, GI41327773, Length=398, Percent_Identity=34.9246231155779, Blast_Score=197, Evalue=2e-50, Organism=Homo sapiens, GI4758112, Length=368, Percent_Identity=30.4347826086957, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI18375623, Length=368, Percent_Identity=30.4347826086957, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI83700235, Length=384, Percent_Identity=34.8958333333333, Blast_Score=194, Evalue=1e-49, Organism=Homo sapiens, GI21040371, Length=368, Percent_Identity=30.1630434782609, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI164664518, Length=373, Percent_Identity=31.9034852546917, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI31542656, Length=379, Percent_Identity=32.7176781002639, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI4503529, Length=384, Percent_Identity=33.8541666666667, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI13129006, Length=366, Percent_Identity=33.879781420765, Blast_Score=186, Evalue=4e-47, Organism=Homo sapiens, GI8922886, Length=365, Percent_Identity=33.4246575342466, Blast_Score=185, Evalue=8e-47, Organism=Homo sapiens, GI6005743, Length=365, Percent_Identity=32.8767123287671, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI164419743, Length=377, Percent_Identity=31.0344827586207, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI51094101, Length=377, Percent_Identity=31.0344827586207, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI38569503, Length=380, Percent_Identity=33.1578947368421, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569505, Length=380, Percent_Identity=33.1578947368421, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI188035877, Length=354, Percent_Identity=34.180790960452, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI41327779, Length=379, Percent_Identity=32.7176781002639, Blast_Score=178, Evalue=8e-45, Organism=Homo sapiens, GI13514831, Length=355, Percent_Identity=33.2394366197183, Blast_Score=176, Evalue=4e-44, Organism=Homo sapiens, GI62241022, Length=346, Percent_Identity=33.5260115606936, Blast_Score=176, Evalue=5e-44, Organism=Homo sapiens, GI41327776, Length=397, Percent_Identity=32.4937027707809, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI62241024, Length=322, Percent_Identity=33.8509316770186, Blast_Score=172, Evalue=4e-43, Organism=Homo sapiens, GI38327634, Length=344, Percent_Identity=34.593023255814, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=33.7016574585635, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI256223453, Length=362, Percent_Identity=28.7292817679558, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI154759257, Length=411, Percent_Identity=31.6301703163017, Blast_Score=159, Evalue=4e-39, Organism=Homo sapiens, GI17505907, Length=408, Percent_Identity=28.6764705882353, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI9506931, Length=400, Percent_Identity=29.5, Blast_Score=152, Evalue=8e-37, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=31.1897106109325, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=32.0474777448071, Blast_Score=139, Evalue=6e-33, Organism=Homo sapiens, GI256773275, Length=392, Percent_Identity=29.0816326530612, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI20336298, Length=204, Percent_Identity=37.2549019607843, Blast_Score=116, Evalue=3e-26, Organism=Escherichia coli, GI1790214, Length=386, Percent_Identity=45.0777202072539, Blast_Score=333, Evalue=1e-92, Organism=Escherichia coli, GI1787016, Length=366, Percent_Identity=42.3497267759563, Blast_Score=284, Evalue=6e-78, Organism=Escherichia coli, GI87082221, Length=390, Percent_Identity=38.2051282051282, Blast_Score=252, Evalue=3e-68, Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=39.2265193370166, Blast_Score=237, Evalue=1e-63, Organism=Escherichia coli, GI1788930, Length=349, Percent_Identity=38.9684813753582, Blast_Score=223, Evalue=2e-59, Organism=Caenorhabditis elegans, GI32565321, Length=415, Percent_Identity=35.421686746988, Blast_Score=240, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17510307, Length=380, Percent_Identity=36.5789473684211, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71995514, Length=380, Percent_Identity=36.5789473684211, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17510309, Length=380, Percent_Identity=36.5789473684211, Blast_Score=228, Evalue=6e-60, Organism=Caenorhabditis elegans, GI71987143, Length=384, Percent_Identity=34.6354166666667, Blast_Score=221, Evalue=7e-58, Organism=Caenorhabditis elegans, GI17552642, Length=384, Percent_Identity=37.5, Blast_Score=219, Evalue=3e-57, Organism=Caenorhabditis elegans, GI71995724, Length=376, Percent_Identity=34.3085106382979, Blast_Score=211, Evalue=6e-55, Organism=Caenorhabditis elegans, GI17507121, Length=376, Percent_Identity=34.3085106382979, Blast_Score=211, Evalue=7e-55, Organism=Caenorhabditis elegans, GI17507881, Length=384, Percent_Identity=34.8958333333333, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71995718, Length=380, Percent_Identity=34.4736842105263, Blast_Score=208, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17507877, Length=385, Percent_Identity=35.8441558441558, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI17555296, Length=399, Percent_Identity=33.8345864661654, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71982858, Length=368, Percent_Identity=33.1521739130435, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI86570094, Length=394, Percent_Identity=36.0406091370558, Blast_Score=205, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17507879, Length=386, Percent_Identity=36.5284974093264, Blast_Score=201, Evalue=7e-52, Organism=Caenorhabditis elegans, GI115533224, Length=351, Percent_Identity=35.042735042735, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17510559, Length=397, Percent_Identity=31.7380352644836, Blast_Score=193, Evalue=1e-49, Organism=Caenorhabditis elegans, GI17537549, Length=364, Percent_Identity=33.5164835164835, Blast_Score=192, Evalue=2e-49, Organism=Caenorhabditis elegans, GI115532546, Length=363, Percent_Identity=36.0881542699724, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI115532548, Length=363, Percent_Identity=36.0881542699724, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17509811, Length=386, Percent_Identity=33.419689119171, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552114, Length=372, Percent_Identity=31.4516129032258, Blast_Score=191, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17507945, Length=335, Percent_Identity=34.6268656716418, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71999646, Length=357, Percent_Identity=32.4929971988796, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI71999644, Length=357, Percent_Identity=32.4929971988796, Blast_Score=181, Evalue=8e-46, Organism=Caenorhabditis elegans, GI71990816, Length=362, Percent_Identity=33.7016574585635, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507641, Length=379, Percent_Identity=32.7176781002639, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17536099, Length=396, Percent_Identity=31.3131313131313, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17536101, Length=396, Percent_Identity=31.3131313131313, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17505370, Length=341, Percent_Identity=33.1378299120235, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI17536103, Length=396, Percent_Identity=31.3131313131313, Blast_Score=162, Evalue=3e-40, Organism=Caenorhabditis elegans, GI32564046, Length=369, Percent_Identity=32.520325203252, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI193208216, Length=386, Percent_Identity=29.7927461139896, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI193206561, Length=357, Percent_Identity=27.7310924369748, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI71982862, Length=231, Percent_Identity=36.7965367965368, Blast_Score=146, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17508543, Length=384, Percent_Identity=27.6041666666667, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI25148203, Length=418, Percent_Identity=26.0765550239234, Blast_Score=145, Evalue=4e-35, Organism=Caenorhabditis elegans, GI17556951, Length=372, Percent_Identity=28.2258064516129, Blast_Score=134, Evalue=7e-32, Organism=Caenorhabditis elegans, GI17553716, Length=377, Percent_Identity=27.0557029177719, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71997889, Length=420, Percent_Identity=26.9047619047619, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=342, Percent_Identity=25.1461988304094, Blast_Score=108, Evalue=5e-24, Organism=Caenorhabditis elegans, GI25148291, Length=335, Percent_Identity=27.7611940298507, Blast_Score=107, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71987152, Length=111, Percent_Identity=44.1441441441441, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17566630, Length=321, Percent_Identity=23.0529595015576, Blast_Score=75, Evalue=9e-14, Organism=Saccharomyces cerevisiae, GI6324778, Length=365, Percent_Identity=37.2602739726027, Blast_Score=227, Evalue=2e-60, Organism=Saccharomyces cerevisiae, GI6325138, Length=351, Percent_Identity=37.6068376068376, Blast_Score=226, Evalue=4e-60, Organism=Saccharomyces cerevisiae, GI6321856, Length=385, Percent_Identity=36.8831168831169, Blast_Score=219, Evalue=9e-58, Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=33.6, Blast_Score=216, Evalue=5e-57, Organism=Saccharomyces cerevisiae, GI6321360, Length=376, Percent_Identity=38.031914893617, Blast_Score=212, Evalue=7e-56, Organism=Saccharomyces cerevisiae, GI6323021, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=1e-55, Organism=Saccharomyces cerevisiae, GI6324217, Length=385, Percent_Identity=35.3246753246753, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6322912, Length=373, Percent_Identity=33.2439678284182, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6322323, Length=373, Percent_Identity=33.2439678284182, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6320041, Length=371, Percent_Identity=32.3450134770889, Blast_Score=200, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6320449, Length=359, Percent_Identity=36.2116991643454, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6324620, Length=401, Percent_Identity=33.9152119700748, Blast_Score=191, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6323947, Length=390, Percent_Identity=32.8205128205128, Blast_Score=190, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6320400, Length=421, Percent_Identity=30.8788598574822, Blast_Score=179, Evalue=8e-46, Organism=Saccharomyces cerevisiae, GI6322427, Length=379, Percent_Identity=34.5646437994723, Blast_Score=176, Evalue=6e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=363, Percent_Identity=34.435261707989, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6320119, Length=381, Percent_Identity=28.6089238845144, Blast_Score=170, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6319714, Length=369, Percent_Identity=31.1653116531165, Blast_Score=166, Evalue=8e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=425, Percent_Identity=28.9411764705882, Blast_Score=157, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=31.0626702997275, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=371, Percent_Identity=31.5363881401617, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6319618, Length=406, Percent_Identity=27.5862068965517, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6320173, Length=243, Percent_Identity=31.2757201646091, Blast_Score=116, Evalue=6e-27, Organism=Saccharomyces cerevisiae, GI6322876, Length=416, Percent_Identity=26.2019230769231, Blast_Score=110, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6324366, Length=408, Percent_Identity=25.2450980392157, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6321374, Length=380, Percent_Identity=23.9473684210526, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24584994, Length=404, Percent_Identity=35.8910891089109, Blast_Score=233, Evalue=2e-61, Organism=Drosophila melanogaster, GI24584399, Length=372, Percent_Identity=36.5591397849462, Blast_Score=227, Evalue=1e-59, Organism=Drosophila melanogaster, GI17985987, Length=380, Percent_Identity=35.5263157894737, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI21356161, Length=366, Percent_Identity=35.792349726776, Blast_Score=210, Evalue=1e-54, Organism=Drosophila melanogaster, GI21355075, Length=364, Percent_Identity=35.7142857142857, Blast_Score=206, Evalue=3e-53, Organism=Drosophila melanogaster, GI28574962, Length=370, Percent_Identity=35.4054054054054, Blast_Score=205, Evalue=5e-53, Organism=Drosophila melanogaster, GI24642151, Length=369, Percent_Identity=38.2113821138211, Blast_Score=205, Evalue=6e-53, Organism=Drosophila melanogaster, GI24662330, Length=374, Percent_Identity=36.3636363636364, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI24645031, Length=383, Percent_Identity=32.8981723237598, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24644479, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24644483, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24644487, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI45551833, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24644485, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI281361218, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24644481, Length=364, Percent_Identity=34.8901098901099, Blast_Score=202, Evalue=4e-52, Organism=Drosophila melanogaster, GI24585582, Length=394, Percent_Identity=33.248730964467, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI18857967, Length=400, Percent_Identity=34.25, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI17977678, Length=360, Percent_Identity=33.8888888888889, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24582080, Length=384, Percent_Identity=34.375, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24582078, Length=384, Percent_Identity=34.375, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17136248, Length=384, Percent_Identity=34.375, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI24582075, Length=384, Percent_Identity=34.375, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28575014, Length=368, Percent_Identity=32.3369565217391, Blast_Score=185, Evalue=5e-47, Organism=Drosophila melanogaster, GI24583281, Length=372, Percent_Identity=30.6451612903226, Blast_Score=182, Evalue=5e-46, Organism=Drosophila melanogaster, GI24583279, Length=372, Percent_Identity=30.6451612903226, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI17136814, Length=397, Percent_Identity=32.9974811083123, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI28571808, Length=347, Percent_Identity=35.4466858789625, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI28571809, Length=347, Percent_Identity=35.4466858789625, Blast_Score=179, Evalue=4e-45, Organism=Drosophila melanogaster, GI24581954, Length=368, Percent_Identity=30.1630434782609, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581952, Length=368, Percent_Identity=30.1630434782609, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24581956, Length=368, Percent_Identity=30.1630434782609, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24642822, Length=408, Percent_Identity=30.6372549019608, Blast_Score=169, Evalue=4e-42, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=32.2222222222222, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=34.9673202614379, Blast_Score=161, Evalue=7e-40, Organism=Drosophila melanogaster, GI21355559, Length=367, Percent_Identity=33.7874659400545, Blast_Score=160, Evalue=2e-39, Organism=Drosophila melanogaster, GI20130173, Length=425, Percent_Identity=29.1764705882353, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI24643725, Length=382, Percent_Identity=28.5340314136126, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI17647335, Length=365, Percent_Identity=27.9452054794521, Blast_Score=152, Evalue=6e-37, Organism=Drosophila melanogaster, GI19920478, Length=335, Percent_Identity=30.4477611940298, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI17136666, Length=385, Percent_Identity=28.3116883116883, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI24668515, Length=331, Percent_Identity=29.607250755287, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI24640164, Length=387, Percent_Identity=23.5142118863049, Blast_Score=112, Evalue=3e-25, Organism=Drosophila melanogaster, GI18859659, Length=189, Percent_Identity=36.5079365079365, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI28571338, Length=189, Percent_Identity=36.5079365079365, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 47656; Mature: 47656
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAG CCCCCCCCCCHHHHCCCHHHCCCCCEEECEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHC ADAIGRAQTGTGKTAAFLITVINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANI CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHCCCCC LTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRLLDFAKRRDLWLDRVEFLVLD EEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEC EADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ CHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHCCCCCEEEEECCCE VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSL EEHHHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEE ISGDVPQTQRSKTLERFRAGDLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIG ECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHHHEEECCCCCCHHHHHHHCC RTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPPADLLAERERSASAKAPDAEK CCCCCCCCCCEEEEEECCCCEECCCHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCC KD CC >Mature Secondary Structure MQKDKASSWSLEQFQVPEKEGERRFHDFDLHLDLMHGIADSGFQYCTPIQAEVLEHTLAG CCCCCCCCCCHHHHCCCHHHCCCCCEEECEEHHHHHHHHHCCCCCCCCHHHHHHHHHHHC ADAIGRAQTGTGKTAAFLITVINDLLKHPIDVQRFAGEPRALIVAPTRELAMQIEKDANI CHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEEECCHHHHHHHHCCCCC LTKYTDLQVMSVVGGMNFNRQQERLQNKLIDILVATPGRLLDFAKRRDLWLDRVEFLVLD EEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEC EADRMLDMGFIPDVKRIVGMTPKSQYRQTQLFSATFNDDVMNLSRRWTQDAEIVEIEPTQ CHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHEEECCCHHHHHHHHHCCCCCEEEEECCCE VTTDTVEQKVYITNTDDKFKLLYNLITGMNMDKVIVFANRRDITRRVCDRLQKRGLKVSL EEHHHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEE ISGDVPQTQRSKTLERFRAGDLQVLIATDVAGRGIHIDGVSHVVNYNLPEDPEDYVHRIG ECCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCEEECCHHHEEECCCCCCHHHHHHHCC RTGRAGASGMSISFACEDDAFLLPELENAIGMKLECEYPPADLLAERERSASAKAPDAEK CCCCCCCCCCEEEEEECCCCEECCCHHHHCCCEEECCCCCHHHHHHHHHCCCCCCCCCCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12534463 [H]