Click here to switch to the map view.

The map label for this gene is 110834776

Identifier: 110834776

GI number: 110834776

Start: 2191980

End: 2193290

Strand: Reverse

Name: 110834776

Synonym: ABO_1915

Alternate gene names: NA

Gene position: 2193290-2191980 (Counterclockwise)

Preceding gene: 110834783

Following gene: 110834775

Centisome position: 70.29

GC content: 53.32

Gene sequence:

>1311_bases
ATGCTTAAGCGAGCGTTTCATCTTTTGATCGGTGCTGCCTTAGTGGCAGGTTATTTTGCTGCAACACCGGAGCGGCTTTG
GCAACCGCCACCGCAGTTGCTGGCCGTAGAACCTGCACCGGTGCCCTCTGATTCCCAGTGGCAAATCCGCTTTGCGTCGG
ATGCGGACACCCGCATGGTACACGCAGCCTCTATGGTGGAGTTGCCGGATGGCCGGTTGCGCGCTTTTTGGTTCGCCGGG
ACCCGTGAAGGGGCGGCAGATGTGTCTATTAATTCCGCTATCTTTGACCCTCAATTAGGAACCTGGTCTGACGAGATCGT
ATCTGTCACACGTGAACAGATTTCCCAAGGCTGGGGTAGGCACATTCGCAAGCTGGGTAATGCGCTGCCGGTGTTGGATG
AGGATGGCCGCATGCGTTTGTTTGTGGTCGCAGTGAGCTTCGGCGGCTGGGCGGCCAGCCGATTGGTGGTGCTGGAATCC
TCGGATATGGGCGCCAGTTGGGAATTTGACACCTCATTGGTGGCCACGCCGTTTCTGAATATAAGCACCCTAGTGAAAAC
CCCGCCTATCCATTACAGCGATGGCACCATCGGTTTACCGGTGTACCACGAAATGATTGGCAAGTTTGGCGAGATTCTGC
GTTTGGATAGGGATAATCGTATTCTCGGTAAAGCCCGTATCGGGCATGGGCGCAAGGCGATTCAGCCACTTGTGCTGGTG
GATAATAATAACCATGCAGTTTCTTTCTTGCGCAATGAGAACGAGCCCAATAATGGCTATTTATACCAATCCTCCAGTAA
CGATGGAGGTTGGACATGGACGCCGCTGGAATATTCTCCCTTAGATAATCCCAGTTCCGCCCTTGGTGGCGTGGCTATGG
GGCCTGGGCACTGGTTGGTAGCGACCAACTGTAACCGTGAAGAGCGTGATGATCTGTGTATTCGCGAAACTCGTGATTCC
GGGCAGCACTGGGAAGATCGGTGGTTTTTCCATAATCGGGAGCAGTGGAGAGGTAATGCGTTAGAGCCAGGAACCTTTGT
AGATCTGGTCGATGATGAGTTTGCTGGGGAAACGATTCCCGAAGATCGACGTCTTCTTTTGGAGCGAGTAAAGGCCAACA
AATGTCATGGCGACCACGGATGTGCATTCCAGTATGACTATCCTTATATGGTGCGCACAAGGAACGGGGATCTGCACATG
CTTTACACCTGGAACAAGACGGCTATCCGCCATGCCTGGTTAAAAGCCGATACGGTGGGCCGTACGCCGCACAACAATAG
TCAGCGCAAGGAGATCACTTATGTCGATTGA

Upstream 100 bases:

>100_bases
GCAATTTTGCGGACGGCTGCTAAACTGTGATCTCGCGCGTCATGCGTTGATCGAGTAACCAATAACAAGCATTTGCATAC
CTAAGTTGCGACAATTTCCT

Downstream 100 bases:

>100_bases
TCTGGTTATTTGCGCATTAGTGTTGGTGGCGATTCAGTTGCGCATTAGTGCCACTCTGTTGTCTTTGCGCGGTCGTGTGG
TTTTGGCCTGTGTAGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Neuraminidase; BNR/Asp-Box Repeat Protein; BNR Repeat-Containing Glycosyl Hydrolase; Inner Membrane Protein; BNR/Asp Box Repeat-Containing Protein

Number of amino acids: Translated: 436; Mature: 436

Protein sequence:

>436_residues
MLKRAFHLLIGAALVAGYFAATPERLWQPPPQLLAVEPAPVPSDSQWQIRFASDADTRMVHAASMVELPDGRLRAFWFAG
TREGAADVSINSAIFDPQLGTWSDEIVSVTREQISQGWGRHIRKLGNALPVLDEDGRMRLFVVAVSFGGWAASRLVVLES
SDMGASWEFDTSLVATPFLNISTLVKTPPIHYSDGTIGLPVYHEMIGKFGEILRLDRDNRILGKARIGHGRKAIQPLVLV
DNNNHAVSFLRNENEPNNGYLYQSSSNDGGWTWTPLEYSPLDNPSSALGGVAMGPGHWLVATNCNREERDDLCIRETRDS
GQHWEDRWFFHNREQWRGNALEPGTFVDLVDDEFAGETIPEDRRLLLERVKANKCHGDHGCAFQYDYPYMVRTRNGDLHM
LYTWNKTAIRHAWLKADTVGRTPHNNSQRKEITYVD

Sequences:

>Translated_436_residues
MLKRAFHLLIGAALVAGYFAATPERLWQPPPQLLAVEPAPVPSDSQWQIRFASDADTRMVHAASMVELPDGRLRAFWFAG
TREGAADVSINSAIFDPQLGTWSDEIVSVTREQISQGWGRHIRKLGNALPVLDEDGRMRLFVVAVSFGGWAASRLVVLES
SDMGASWEFDTSLVATPFLNISTLVKTPPIHYSDGTIGLPVYHEMIGKFGEILRLDRDNRILGKARIGHGRKAIQPLVLV
DNNNHAVSFLRNENEPNNGYLYQSSSNDGGWTWTPLEYSPLDNPSSALGGVAMGPGHWLVATNCNREERDDLCIRETRDS
GQHWEDRWFFHNREQWRGNALEPGTFVDLVDDEFAGETIPEDRRLLLERVKANKCHGDHGCAFQYDYPYMVRTRNGDLHM
LYTWNKTAIRHAWLKADTVGRTPHNNSQRKEITYVD
>Mature_436_residues
MLKRAFHLLIGAALVAGYFAATPERLWQPPPQLLAVEPAPVPSDSQWQIRFASDADTRMVHAASMVELPDGRLRAFWFAG
TREGAADVSINSAIFDPQLGTWSDEIVSVTREQISQGWGRHIRKLGNALPVLDEDGRMRLFVVAVSFGGWAASRLVVLES
SDMGASWEFDTSLVATPFLNISTLVKTPPIHYSDGTIGLPVYHEMIGKFGEILRLDRDNRILGKARIGHGRKAIQPLVLV
DNNNHAVSFLRNENEPNNGYLYQSSSNDGGWTWTPLEYSPLDNPSSALGGVAMGPGHWLVATNCNREERDDLCIRETRDS
GQHWEDRWFFHNREQWRGNALEPGTFVDLVDDEFAGETIPEDRRLLLERVKANKCHGDHGCAFQYDYPYMVRTRNGDLHM
LYTWNKTAIRHAWLKADTVGRTPHNNSQRKEITYVD

Specific function: Unknown

COG id: COG4692

COG function: function code G; Predicted neuraminidase (sialidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49163; Mature: 49163

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRAFHLLIGAALVAGYFAATPERLWQPPPQLLAVEPAPVPSDSQWQIRFASDADTRMV
CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEE
HAASMVELPDGRLRAFWFAGTREGAADVSINSAIFDPQLGTWSDEIVSVTREQISQGWGR
EEEHEEECCCCCEEEEEEECCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHH
HIRKLGNALPVLDEDGRMRLFVVAVSFGGWAASRLVVLESSDMGASWEFDTSLVATPFLN
HHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCEEECCCCC
ISTLVKTPPIHYSDGTIGLPVYHEMIGKFGEILRLDRDNRILGKARIGHGRKAIQPLVLV
HHHHHCCCCEEECCCEECCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHCCCEEEE
DNNNHAVSFLRNENEPNNGYLYQSSSNDGGWTWTPLEYSPLDNPSSALGGVAMGPGHWLV
ECCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCEECCCCCCCHHHHCCEEECCCCEEE
ATNCNREERDDLCIRETRDSGQHWEDRWFFHNREQWRGNALEPGTFVDLVDDEFAGETIP
EECCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCC
EDRRLLLERVKANKCHGDHGCAFQYDYPYMVRTRNGDLHMLYTWNKTAIRHAWLKADTVG
HHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEEEEECCHHHHHHHEECCCCC
RTPHNNSQRKEITYVD
CCCCCCCCCCEEEECC
>Mature Secondary Structure
MLKRAFHLLIGAALVAGYFAATPERLWQPPPQLLAVEPAPVPSDSQWQIRFASDADTRMV
CCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEECCCCCCCCCCEEEEECCCCCCEEE
HAASMVELPDGRLRAFWFAGTREGAADVSINSAIFDPQLGTWSDEIVSVTREQISQGWGR
EEEHEEECCCCCEEEEEEECCCCCCCCEEECCEEECCCCCCCHHHHHHHHHHHHHHHHHH
HIRKLGNALPVLDEDGRMRLFVVAVSFGGWAASRLVVLESSDMGASWEFDTSLVATPFLN
HHHHHCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCCCCCEECCCCEEECCCCC
ISTLVKTPPIHYSDGTIGLPVYHEMIGKFGEILRLDRDNRILGKARIGHGRKAIQPLVLV
HHHHHCCCCEEECCCEECCHHHHHHHHHHHHHEEECCCCCEEEEEECCCCHHHCCCEEEE
DNNNHAVSFLRNENEPNNGYLYQSSSNDGGWTWTPLEYSPLDNPSSALGGVAMGPGHWLV
ECCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCEECCCCCCCHHHHCCEEECCCCEEE
ATNCNREERDDLCIRETRDSGQHWEDRWFFHNREQWRGNALEPGTFVDLVDDEFAGETIP
EECCCCCCCCCEEEEECCCCCCCCCCCEEECCCHHHCCCCCCCCCEEEECCCCCCCCCCC
EDRRLLLERVKANKCHGDHGCAFQYDYPYMVRTRNGDLHMLYTWNKTAIRHAWLKADTVG
HHHHHHHHHHHHCCCCCCCCCEEEECCCEEEEECCCCEEEEEEECCHHHHHHHEECCCCC
RTPHNNSQRKEITYVD
CCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA